Ggra10278.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10278.t1
Unique NameGgra10278.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length182
Homology
BLAST of Ggra10278.t1 vs. uniprot
Match: A0A2V3IHI0 (ADP-ribosylation factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHI0_9FLOR)

HSP 1 Score: 344 bits (882), Expect = 1.790e-119
Identity = 175/180 (97.22%), Postives = 177/180 (98.33%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQSK 180
            MG  LSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQ+AKRELMSIIEE+ELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTII TSALRGDGLKEGFEWISEAVQSK
Sbjct:    1 MGNVLSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQVAKRELMSIIEEEELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIPTSALRGDGLKEGFEWISEAVQSK 180          
BLAST of Ggra10278.t1 vs. uniprot
Match: R7QNI9 (Small GTP-binding protein of Sar1/Arf family n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNI9_CHOCR)

HSP 1 Score: 332 bits (851), Expect = 9.550e-115
Identity = 164/181 (90.61%), Postives = 179/181 (98.90%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQSKA 181
            MG ALSRLI+SLFG+KE+RILILGLDNAGKTSILYR+KEGTFHSTVPTIGFNAEQ+E+GKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCD +RMQIAKRELM+IIEE+ELKNAVVCVFANKQDMPEAL+AAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWIS+++++KA
Sbjct:    1 MGNALSRLISSLFGEKEVRILILGLDNAGKTSILYRLKEGTFHSTVPTIGFNAEQIEVGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDANRMQIAKRELMNIIEEEELKNAVVCVFANKQDMPEALSAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISDSIKTKA 181          
BLAST of Ggra10278.t1 vs. uniprot
Match: A0A1X6NLY8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLY8_PORUM)

HSP 1 Score: 281 bits (720), Expect = 8.800e-95
Identity = 135/181 (74.59%), Postives = 161/181 (88.95%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQSKA 181
            MG A S L+ASLFGDKE RILILGLDNAGKTSILYR+KEGTFHSTVPTIGFNAE LE+GKLKAQVWDLGGQESIRPYWRSY+  QEAV+FVVDSCD  R+ +A+RELM++++E+EL++A+VCV ANKQD PEA+ AA IAEAL L+SI D+KWTII+ SALRG+GLKEGF+WI+  + +K+
Sbjct:    1 MGNAFSWLLASLFGDKEARILILGLDNAGKTSILYRLKEGTFHSTVPTIGFNAETLEVGKLKAQVWDLGGQESIRPYWRSYFSHQEAVVFVVDSCDSARLDVARRELMAVLDEEELRSALVCVLANKQDRPEAMPAAAIAEALSLTSIRDRKWTIISASALRGEGLKEGFQWIAAELDNKS 181          
BLAST of Ggra10278.t1 vs. uniprot
Match: A0A5J4YTK3 (ADP-ribosylation factor 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTK3_PORPP)

HSP 1 Score: 248 bits (632), Expect = 2.140e-81
Identity = 117/179 (65.36%), Postives = 145/179 (81.01%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQS 179
            MG   S L+ASLFG +E+RIL+LGLDNAGKTSILYR+K+G    TVPTIGFN E LE   +  QVWDLGGQ SIRPYWRSYYQ QEAVIFVVDS D+DRM IA+ EL S++EE+EL++A+VC+FANKQD PEA+  A++AEA+G++ + D+ WTII TSAL+G GL+EG  WIS  ++S
Sbjct:    1 MGGVFSSLLASLFGSREVRILMLGLDNAGKTSILYRLKDGAHIKTVPTIGFNVETLEFNNISMQVWDLGGQASIRPYWRSYYQRQEAVIFVVDSTDRDRMSIAQSELASLLEEEELEDAIVCIFANKQDAPEAMEVADVAEAMGVNRLQDRTWTIIGTSALKGTGLEEGLSWISNNLKS 179          
BLAST of Ggra10278.t1 vs. uniprot
Match: M2X630 (ADP-ribosylation factor isoform 2 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X630_GALSU)

HSP 1 Score: 247 bits (631), Expect = 4.110e-81
Identity = 118/179 (65.92%), Postives = 147/179 (82.12%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQS 179
            MG   SRL   LFG+KE+R+L++GLDNAGKT++LYR+KEG+   TVPTIGFN EQ+E+  LK QVWDLGGQ SIRPYWRSYYQ+QEA+IFVVDS D++R   AK EL+SI++E+ELKN V+ VFANKQD+PEA +AAE++ ALGL SI D+ WTII+TSA +GDG+ EGFEW   A+ S
Sbjct:    1 MGNIFSRLFQRLFGNKEVRVLMVGLDNAGKTTLLYRIKEGSMIKTVPTIGFNMEQIEVNNLKMQVWDLGGQTSIRPYWRSYYQKQEALIFVVDSNDRERFSTAKTELLSILQEEELKNTVIAVFANKQDLPEAASAAEVSLALGLDSIKDRTWTIISTSAAKGDGIAEGFEWFLNALFS 179          
BLAST of Ggra10278.t1 vs. uniprot
Match: C1E9M6 (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9M6_MICCC)

HSP 1 Score: 223 bits (569), Expect = 1.180e-71
Identity = 103/180 (57.22%), Postives = 138/180 (76.67%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQSK 180
            MG  +SR++A+ FGDKE RIL+LGLDNAGKT+ILYR++ G   ST+PTIGFN E +    +K QVWDLGGQ SIRPYWR YY    A+++VVDSCDK+R+  +K EL  I+EEDEL+N ++ +FANKQD+PEA    EI E LGL+ + D++W I  TSAL+G+GL EG EW+S+ ++++
Sbjct:    1 MGVLMSRVMAA-FGDKEARILVLGLDNAGKTTILYRLQVGAVVSTIPTIGFNVETVTFKNVKFQVWDLGGQTSIRPYWRCYYPNTTAIVYVVDSCDKERIPTSKEELQGILEEDELRNCIIMIFANKQDLPEAATEVEITEGLGLNGVKDRQWAIFKTSALKGEGLWEGMEWLSQQLKAR 179          
BLAST of Ggra10278.t1 vs. uniprot
Match: A9TNA9 (Arl1-family small GTPase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9TNA9_PHYPA)

HSP 1 Score: 222 bits (565), Expect = 3.570e-71
Identity = 104/179 (58.10%), Postives = 141/179 (78.77%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQS 179
            MG  +SRL+A+LFGDKE RIL+LGLDNAGKT+ILYR++ G   ST+PTIGFN E +    +K QVWDLGGQ SIRPYWR YY   +A+I+VVDS D DRM IA+ E  +I++E+ELK++V+ ++ANKQD+P AL AA ++EAL L +I +++W+I  TSA++GDGL EG +W+S  ++S
Sbjct:    1 MGIFVSRLLATLFGDKEARILVLGLDNAGKTTILYRLQVGEVVSTIPTIGFNVETVTYNNIKFQVWDLGGQTSIRPYWRCYYPNTQAIIYVVDSSDTDRMSIAQEEFHAILQEEELKDSVILIYANKQDLPGALDAAAVSEALNLHTIKNRQWSIFKTSAIKGDGLFEGLDWLSNTLKS 179          
BLAST of Ggra10278.t1 vs. uniprot
Match: A0A6P4ZKX1 (ADP-ribosylation factor-like protein 1 n=2 Tax=Chordata TaxID=7711 RepID=A0A6P4ZKX1_BRABE)

HSP 1 Score: 221 bits (564), Expect = 4.900e-71
Identity = 106/178 (59.55%), Postives = 137/178 (76.97%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQ 178
            MG   S L +SLFG +E+RILILGLD AGKT+ILYR++ G   +T+PTIGFN E +    LK QVWDLGGQ SIRPYWR YY   +A+I+VVDSCDKDRM I+K EL++++EE+ELK A++ VFANKQDM  AL   E+A  LGL++I D+KW I  TSA++G+GL+E  EW+ EA++
Sbjct:    1 MGGWFSSLFSSLFGQREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSCDKDRMGISKSELVAMLEEEELKKAILLVFANKQDMEGALTPTEVANQLGLAAIKDRKWQIFKTSAIKGEGLEEAMEWLVEALK 178          
BLAST of Ggra10278.t1 vs. uniprot
Match: A0A0M0KB00 (ADP-ribosylation factor 3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KB00_9EUKA)

HSP 1 Score: 221 bits (564), Expect = 5.060e-71
Identity = 104/178 (58.43%), Postives = 141/178 (79.21%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQ 178
            MGA  S+L A+L G++E+R+LILGLDNAGKT+ILY+++ G   +TVPTIGFN E ++   L+ QVWDLGGQ SIRPYWR YYQ   AVI+VVDS D DRM I+K+ELM+++EE+ELK+A + VFANKQD+P AL+  +IA+ LGL+S+  ++W I  TSA++GDGL EG +W+  A++
Sbjct:    1 MGAVFSKLFAALIGNREVRVLILGLDNAGKTTILYKLQMGEVVTTVPTIGFNVETVQYKNLRFQVWDLGGQTSIRPYWRCYYQNTNAVIYVVDSADHDRMGISKQELMAMLEEEELKDAALIVFANKQDLPNALSCEQIADRLGLASLKSRQWAIFKTSAVKGDGLFEGLDWLCAALR 178          
BLAST of Ggra10278.t1 vs. uniprot
Match: A0A0L0SX93 (ADP-ribosylation factor-like protein 1 n=3 Tax=Blastocladiales TaxID=4805 RepID=A0A0L0SX93_ALLM3)

HSP 1 Score: 221 bits (562), Expect = 9.870e-71
Identity = 102/180 (56.67%), Postives = 140/180 (77.78%), Query Frame = 0
Query:    1 MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIGFNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRMQIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVDKKWTIIATSALRGDGLKEGFEWISEAVQSK 180
            MG   SRL++ L+GDKE+RILILGLD AGKT+ILYR++ G   +T+PTIGFN E +    +K QVWDLGGQ SIRPYWR YY   +A+I+VVDSCDKDRM +++ EL+S++EE+ELK+A + V ANKQDM  AL+ A+++E LGLS++ +++W I  TSAL+G+GL E  +W+   ++SK
Sbjct:    1 MGGLFSRLLSRLWGDKEVRILILGLDGAGKTTILYRLQIGEVVTTIPTIGFNVETVSYKNIKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSCDKDRMAVSREELVSMLEEEELKDAALLVMANKQDMEGALSPAQVSEQLGLSALKNRQWQIFRTSALKGEGLNEALDWLVNVIESK 180          
The following BLAST results are available for this feature:
BLAST of Ggra10278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHI01.790e-11997.22ADP-ribosylation factor 1 n=1 Tax=Gracilariopsis c... [more]
R7QNI99.550e-11590.61Small GTP-binding protein of Sar1/Arf family n=1 T... [more]
A0A1X6NLY88.800e-9574.59Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YTK32.140e-8165.36ADP-ribosylation factor 1 n=1 Tax=Porphyridium pur... [more]
M2X6304.110e-8165.92ADP-ribosylation factor isoform 2 n=2 Tax=Galdieri... [more]
C1E9M61.180e-7157.22Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A9TNA93.570e-7158.10Arl1-family small GTPase n=3 Tax=Physcomitrium pat... [more]
A0A6P4ZKX14.900e-7159.55ADP-ribosylation factor-like protein 1 n=2 Tax=Cho... [more]
A0A0M0KB005.060e-7158.43ADP-ribosylation factor 3 n=1 Tax=Chrysochromulina... [more]
A0A0L0SX939.870e-7156.67ADP-ribosylation factor-like protein 1 n=3 Tax=Bla... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 74..99
score: 39.37
coord: 19..42
score: 52.21
coord: 47..71
score: 44.24
coord: 119..140
score: 27.27
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 3..177
e-value: 2.1E-29
score: 113.7
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..176
e-value: 1.6E-68
score: 229.6
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..181
e-value: 5.9E-77
score: 271.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..180
e-value: 5.1E-6
score: -34.6
NoneNo IPR availablePANTHERPTHR11711:SF372ADP-RIBOSYLATION FACTOR 3coord: 1..180
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..177
score: 21.575489
NoneNo IPR availablePROSITEPS51419RABcoord: 13..181
score: 10.733169
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..171
e-value: 4.8E-21
score: 73.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..181
e-value: 1.8E-67
score: 228.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..178
IPR024156Small GTPase superfamily, ARF typePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:359275..360146 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10278.t1Ggra10278.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 359275..360146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10278.t1 ID=Ggra10278.t1|Name=Ggra10278.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=182bp
MGAALSRLIASLFGDKEIRILILGLDNAGKTSILYRMKEGTFHSTVPTIG
FNAEQLEIGKLKAQVWDLGGQESIRPYWRSYYQEQEAVIFVVDSCDKDRM
QIAKRELMSIIEEDELKNAVVCVFANKQDMPEALAAAEIAEALGLSSIVD
KKWTIIATSALRGDGLKEGFEWISEAVQSKA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF