Ggra10256.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10256.t1
Unique NameGgra10256.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length198
Homology
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A2V3IJX8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJX8_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 7.560e-83
Identity = 131/192 (68.23%), Postives = 153/192 (79.69%), Query Frame = 0
Query:    1 MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKEPGDNFLLVSAVIGSXXXXXXERGIPIIERYLNNEDNSIKERAVIAHDMLVK 192
            ML S D L+RIRGINR  EL S SE V  L+ I+T D NQQVRY A+SRLS ++  SLSEE+KE+LLTAARF+LVND+ESSCQ+ AAD+IA LRL +GFDDLV TFNSTSDWMLKFSIAAGLGEMGD KAFDFLVS+LD E  +  LL++A IGS      ERG+PI+ERYL NED S++ERA IA  ML+K
Sbjct:    9 MLASDDLLERIRGINRINELPSTSERVETLIKISTGDVNQQVRYAAVSRLSNMDRASLSEEDKEKLLTAARFVLVNDSESSCQSAAADLIAALRLYEGFDDLVDTFNSTSDWMLKFSIAAGLGEMGDAKAFDFLVSILDGESSNESLLITAAIGSIGELGDERGLPIVERYLENEDKSVRERAKIARAMLLK 200          
BLAST of Ggra10256.t1 vs. uniprot
Match: uncharacterized protein LOC123544650 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6BCB (uncharacterized protein LOC123544650 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6BCB)

HSP 1 Score: 175 bits (444), Expect = 2.910e-52
Identity = 91/190 (47.89%), Postives = 138/190 (72.63%), Query Frame = 0
Query:    2 LVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKEPGD-NFLLVSAVIGSXXXXXXERGIPIIERYLNNEDNSIKERAVIAHDML 190
            L S D L R+R IN   +  + +++++ALV +A+ D+N Q+RY AIS+L+ L+   L++EEK  LL  +  ++ NDT+SSCQ+GAAD+IAGL L+DGF+ LV+TFN T+DWMLK +IAAG+GE+GDP+A DFL   ++   G+ N LL++A+IG+        G+P+IER+L + D SI++RA IA +++
Sbjct:   12 LASPDFLTRVRAINDHRQR-APAQVIAALVPLASADKNPQIRYSAISQLAGLDRNELTDEEKATLLQTSIEMIKNDTDSSCQSGAADVIAGLGLTDGFETLVSTFNETTDWMLKLTIAAGMGEIGDPRASDFLKGEVEGAEGEGNELLLTAIIGALGDIRDPDGLPVIERFLEHPDVSIRQRAAIAVELI 200          
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A7S2ZH45 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH45_9RHOD)

HSP 1 Score: 117 bits (294), Expect = 2.130e-29
Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 0
Query:    1 MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKEPGDNFLLVSAVIGSXXXXXXERGIPIIERYLNNEDNSIKERA 183
            +L S D +DR++G+N   ELD    +   L+S+A  D +  VRY  +S+LS      L++ EK   L   R ++  +T+ S +A AAD +  + L + FDD+ A ++ T D ++KFSIAAGLGE+G+ KAFD L  +L+ E  D+ L V+A +GS           I+E +L  ED S+K RA
Sbjct:   43 LLTSDDKVDRLKGVNMARELDPAEGL--NLLSMAAMDPDMNVRYATVSQLSV---AGLADPEKT--LELLRDLVPKETDMSVKAAAADAMCAIGLPEAFDDVEAIYHETKDSLVKFSIAAGLGELGNLKAFDLLKGILEDEASDDLLKVAA-LGSLGDLKAPGTAEIVEPFLEAEDASVKARA 217          
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A5J4ZAR7 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZAR7_PORPP)

HSP 1 Score: 114 bits (286), Expect = 5.180e-28
Identity = 71/190 (37.37%), Postives = 111/190 (58.42%), Query Frame = 0
Query:    1 MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKEPGDNFLLVSAVIGSXXXXXXERGIPIIERYLNNEDNSIKERAVIAHDML 190
            M+ S +   R R +N+   LD   E +  L  +  +D+N Q+RY A+++L+     +    + E      + I++ D E + QA AAD++ GL L   F+ L   ++ T DWMLKFSI +GLGEMGDP+ ++ L+ VL+    D  LL       XXXXXX R +P++E+Y+++ D++I ERA +A D L
Sbjct:   60 MIRSENGGLRARAVNQARFLDP-QECLDVLF-VGAEDKNPQIRYAAVAQLA-----TACTADPERTFELVKRIVLTDKEPTVQAAAADVLTGLSLPGSFELLEEIYSQTGDWMLKFSIISGLGEMGDPRGYELLLRVLETASDDEPLLKVGAXXXXXXXXXRRALPMVEKYIDHPDSAISERAKVARDNL 242          
BLAST of Ggra10256.t1 vs. uniprot
Match: B8HNS4 (PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HNS4_CYAP4)

HSP 1 Score: 113 bits (283), Expect = 7.590e-28
Identity = 66/181 (36.46%), Postives = 102/181 (56.35%), Query Frame = 0
Query:    2 LVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKEPGDNFLLVSAVIGSXXXXXXERGIPIIERYLNNEDNSIKER 182
            L S+D  +R+R +N+   LD    I   LV IA +D N +VRY A+S ++      L ++  +  L   R  L+ND E   +A AAD + GL+L+D FDD+V  + STS+W+++FSI A LGE+GDP+ F+ L+  L     D  LL  A IG+         +P +  Y+++ D  ++ R
Sbjct:   12 LSSNDFGERLRAVNQFRSLDR--GIAFDLVQIAVKDSNARVRYAAVSHMA-----HLGDQNPQLSLEILRDCLLNDDEMDVRAAAADALGGLKLTDAFDDIVQLYESTSEWLVQFSILAALGELGDPRGFEVLIRALSS---DQNLLRLAAIGALGDLGNADAVPYLAPYVDDPDWHVRYR 182          
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A0C1Y1T1 (Phycocyanin alpha phycocyanobilin lyase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1Y1T1_9CYAN)

HSP 1 Score: 113 bits (282), Expect = 1.070e-27
Identity = 55/141 (39.01%), Postives = 91/141 (64.54%), Query Frame = 0
Query:    1 MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKE 141
            ++ SSD  DR+RG+N+  ELD        L+  A+ D+N +VRY A+S+L      +L ++ ++E     R +L+ND E+  Q+ AAD + GL+L++ F++L + +++T +W+LKFSI A LGE+GDP++FD L   L  +
Sbjct:   11 LIESSDLGDRLRGVNQARELDPADGY--RLIMQASHDENARVRYAAVSQLD-----TLGDQNRQETAKLLRHLLLNDPETDVQSAAADALGGLKLTEAFEELQSVYHATDEWLLKFSIVAALGELGDPRSFDLLAEALASD 144          
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A8J8CGG0 (HEAT repeat domain-containing protein n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J8CGG0_9CYAN)

HSP 1 Score: 110 bits (276), Expect = 7.570e-27
Identity = 73/186 (39.25%), Postives = 113/186 (60.75%), Query Frame = 0
Query:    1 MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKEPGDNFLLVSAVIGSXXXXXXERGIPIIERYLNNEDNSIKERAVIA 186
            +L S++  DR+RG+N   +LD    I   L+  +  D+N +VRY AIS+L++L   +LSE      LT  +  L +D E   QA AAD I GL L++ ++DL   +  T++W+++FSI A LGE+G+ + +D L   L     D+ L+V+A IGSXXXXXX+R +P++  Y ++ D  I+ R   A
Sbjct:   10 LLESNNFGDRLRGVNHLRQLDPA--IAYELIKPSVIDENVRVRYAAISQLASLGGQNLSES-----LTMLKSAL-HDPEPDVQAAAADSIGGLHLTEAYEDLKQLYQKTTEWLVRFSIVAALGELGEARGYDLLAEALTS---DSDLVVTAAIGSXXXXXXDRAVPLLVSYASHPDWQIRYRVAQA 184          
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A6I5P832 (HEAT repeat domain-containing protein n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5P832_9CYAN)

HSP 1 Score: 109 bits (272), Expect = 3.280e-26
Identity = 55/141 (39.01%), Postives = 89/141 (63.12%), Query Frame = 0
Query:    1 MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKE 141
            ++ SS+  +R+RG+N+  ELD  S     L+  A +D N +VRY A+S+L      +L  +++ + +   R IL ND E   Q+ AAD + GL++++ F DL + +++T +W+LKFSI A LGE+GDP+ FD LV  L+ +
Sbjct:   11 LIESSNLGERLRGVNQARELDPASSY--PLIVQACKDDNSRVRYAAVSQLD-----TLGNQDRPQTVGLLRDILFNDPEPDVQSAAADALGGLKVTEAFTDLQSAYDTTDEWLLKFSIVAALGELGDPRGFDLLVKALESD 144          
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A0M1JTD2 (Phycocyanin alpha phycocyanobilin lyase n=2 Tax=Planktothricoides TaxID=132607 RepID=A0A0M1JTD2_9CYAN)

HSP 1 Score: 108 bits (271), Expect = 4.730e-26
Identity = 59/137 (43.07%), Postives = 86/137 (62.77%), Query Frame = 0
Query:    2 LVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVL 138
            L S +  DR+R +N    LD    I   L+  A +DQ+ +VRY A+S++     TSL E+++E  LT  R  L ND+E+  QA AAD +A L+L++ FDDL   + +T +W++KFSI A LGEMGDP++F+ L   L
Sbjct:   12 LQSENVGDRLRAVNDLRHLDPA--IAFQLIQTAIKDQSARVRYAAVSQM-----TSLGEQDRETALTVLRDRLHNDSEADVQAAAADALAALKLTEAFDDLRQQYETTKEWLVKFSIVAALGEMGDPRSFEVLEDAL 141          
BLAST of Ggra10256.t1 vs. uniprot
Match: A0A6G3Z3U8 (HEAT repeat domain-containing protein n=1 Tax=Leptolyngbya sp. SIO1D8 TaxID=2607807 RepID=A0A6G3Z3U8_9CYAN)

HSP 1 Score: 108 bits (270), Expect = 6.500e-26
Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 0
Query:    1 MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRLSALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFDDLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKE 141
            +L SSD  DR+R +N+  ELD    I   LV  A  D + +VRY AIS++      +L +++ ++ L   R  L  D E   Q+ AAD + GL++ + FDDL + +  T +W++KFSI A LGE GDP+AF+ LVS LD +
Sbjct:   11 LLASSDVGDRLRAVNQMRELDPA--IAFELVQPACTDSSSRVRYAAISQMD-----TLGQQDLQKALDILRQALKTDPEPDVQSAAADALGGLKILEAFDDLRSVYEDTGEWLVKFSIVAALGEFGDPRAFELLVSALDSD 144          
The following BLAST results are available for this feature:
BLAST of Ggra10256.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJX87.560e-8368.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
uncharacterized protein LOC123544650 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6BCB2.910e-5247.89uncharacterized protein LOC123544650 n=1 Tax=Merce... [more]
A0A7S2ZH452.130e-2938.80Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4ZAR75.180e-2837.37Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
B8HNS47.590e-2836.46PBS lyase HEAT domain protein repeat-containing pr... [more]
A0A0C1Y1T11.070e-2739.01Phycocyanin alpha phycocyanobilin lyase n=3 Tax=Cy... [more]
A0A8J8CGG07.570e-2739.25HEAT repeat domain-containing protein n=1 Tax=Myxa... [more]
A0A6I5P8323.280e-2639.01HEAT repeat domain-containing protein n=1 Tax=Lept... [more]
A0A0M1JTD24.730e-2643.07Phycocyanin alpha phycocyanobilin lyase n=2 Tax=Pl... [more]
A0A6G3Z3U86.500e-2641.13HEAT repeat domain-containing protein n=1 Tax=Lept... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004155PBS lyase HEAT-like repeatSMARTSM00567EZ_HEATcoord: 146..175
e-value: 26.0
score: 13.3
coord: 112..141
e-value: 1.2
score: 18.1
NoneNo IPR availablePFAMPF13646HEAT_2coord: 102..186
e-value: 3.2E-8
score: 33.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 14..195
e-value: 1.6E-16
score: 62.4
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:227807..228400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10256.t1Ggra10256.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 227807..228400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10256.t1 ID=Ggra10256.t1|Name=Ggra10256.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=198bp
MLVSSDALDRIRGINRTAELDSISEIVSALVSIATQDQNQQVRYVAISRL
SALEPTSLSEEEKEELLTAARFILVNDTESSCQAGAADMIAGLRLSDGFD
DLVATFNSTSDWMLKFSIAAGLGEMGDPKAFDFLVSVLDKEPGDNFLLVS
AVIGSLGELGDERGIPIIERYLNNEDNSIKERAVIAHDMLVKDKDSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004155PBS_lyase_HEAT
IPR011989ARM-like
IPR016024ARM-type_fold