Ggra10251.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10251.t1
Unique NameGgra10251.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length519
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10251.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13384HTH_23coord: 140..178
e-value: 1.6E-5
score: 24.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..350
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 130..182
e-value: 7.3E-6
score: 27.6
IPR010921Trp repressor/replication initiatorSUPERFAMILY48295TrpR-likecoord: 140..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:212440..213996 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10251.t1Ggra10251.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 212440..213996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10251.t1 ID=Ggra10251.t1|Name=Ggra10251.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=519bp
MPDVSTAFTASVPTSPPIPSSPPSAVAPPRSDTDNLKSSDTDAPEILKAV
NSDTLRDHDPSPVAAQPPPAAHQSTPDQSTPDQSTPDQCNSAIAPSVVPA
MPQSVSASMDTPSDVPIAPVNLRPRSKNRPGRPPNINENSLMRRLECIMA
VDTGRMAMSEACQHYDISARTFYRWLRNKHRLIELTGFTEEDFRNGPPPA
ERVALSDQIHRMPPATVSDLHSNLPHLPQQPAIAAQSPPNSVSRHPVVFA
QPMALKRRMPRIPHYSYGYNDRGLMQSQIYHRNTTKMPTQTPAAAEEPQR
TCNGRPVARRKSGSTLSPGNDIDVRESNPLYHLPDTDEGPMTPNLETCKR
RKISRSDSVILDDAVDDVLEVHPNQSFVGKCANQGSANGNGNIPNEQSQP
QSSPEDSQTKAANYPDAMGTVNNGVPDSHSRALDLSASQSPMQFVECNQK
HKIEIVSGQKRVNIAWYHGATSADIKEAIARRFSLVPGTPWSLVDTFSDE
IIVSDGMPSGRYHLTVFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR010921Trp_repressor/repl_initiator