Ggra10247.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10247.t1
Unique NameGgra10247.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length381
Homology
BLAST of Ggra10247.t1 vs. uniprot
Match: A0A2V3IFU1 (Myb-related protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFU1_9FLOR)

HSP 1 Score: 236 bits (603), Expect = 2.890e-70
Identity = 159/243 (65.43%), Postives = 179/243 (73.66%), Query Frame = 0
Query:  149 QSLLHV--PLTPLPIAAQM----VGAPLLSQPPPRRVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISQLSTHARCPPAAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXAAHQSRACGSVSEVASPVSQHDGVRGESR--CKRKREA---DGSPSALQPVPQRAKSMAALS 380
            Q LLH+  P  PLP+  Q+      AP  +  PPR++KGPWRPEED ILT+LVN+ GARRWTLIASHI GRTGKQARERWLNQL+PHLTKR WT EEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQIS+LS HAR    A+A XXXXXXXXXXXXXXXXXXXXX     AA             SP+ +H   RG+    CKRKR++     +P +LQP+ QR K+M A S
Sbjct:  233 QPLLHLRLPAQPLPLPTQLSVPNAAAPAPTVTPPRKIKGPWRPEEDTILTDLVNRFGARRWTLIASHIPGRTGKQARERWLNQLSPHLTKRPWTPEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISELSNHARAERGASAXXXXXXXXXXXXXXXXXXXXXXVPPQSAA-------------SPLPEHRVQRGKRSNCCKRKRQSGTLSSAPPSLQPLAQRPKTMTAAS 462          
BLAST of Ggra10247.t1 vs. uniprot
Match: Q7XZ94 (Transforming protein myb (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ94_GRIJA)

HSP 1 Score: 195 bits (496), Expect = 1.080e-57
Identity = 113/203 (55.67%), Postives = 130/203 (64.04%), Query Frame = 0
Query:  177 RRVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISQLST-HARCPPAAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXAAHQSRACGSVSEVASPVSQHDGVRGESRCKRKREADGSPSALQPVPQRAKSMAA 378
            R+VKGPWRPEED ILT+LV KLG RRWT+IASHI GRTGKQARERWLNQL+P L KR WT EEDR+VM AHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQIS+L+  +AR      A                            A      G + E +      D   G+ R   KR+ DGS S+ +P+ QR K++ A
Sbjct:    6 RKVKGPWRPEEDAILTQLVAKLGPRRWTVIASHIPGRTGKQARERWLNQLSPDLAKRPWTPEEDRVVMQAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISELAAGNARADSVGGASSVVDSGAPTEMG--------------VASAGEGGGGLVEASVMGLSCD---GDDRRNAKRKRDGSHSSHEPMSQRTKTLTA 191          
BLAST of Ggra10247.t1 vs. uniprot
Match: R7Q471 (MYB-related protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q471_CHOCR)

HSP 1 Score: 200 bits (508), Expect = 1.810e-57
Identity = 96/113 (84.96%), Postives = 105/113 (92.92%), Query Frame = 0
Query:  177 RRVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISQLSTHAR 289
            R+VKGPWRPEED+ILT+LV K+GARRWT+IASHI GRTGKQARERWLNQL+P LTKR WT EED+IVM+AHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQIS+L   AR
Sbjct:  161 RKVKGPWRPEEDRILTDLVGKMGARRWTVIASHIVGRTGKQARERWLNQLSPDLTKRGWTAEEDQIVMEAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISELGEQAR 273          
BLAST of Ggra10247.t1 vs. uniprot
Match: A0A7S0ZEF3 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEF3_9RHOD)

HSP 1 Score: 173 bits (439), Expect = 2.630e-46
Identity = 83/116 (71.55%), Postives = 96/116 (82.76%), Query Frame = 0
Query:  178 RVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISQLSTHARCPPA 293
            +VKGPWRPEED++L+ LV K GA+ WT+IAS I GRTGKQARERWLNQL P L KR WT EED I+M+ HAR+GNRWSEIAK LKGRTDN+ KNRFNTTIRRQIS+ ++  R  PA
Sbjct:  305 KVKGPWRPEEDRLLSSLVEKYGAKGWTVIASRIPGRTGKQARERWLNQLNPDLAKRTWTKEEDMIIMEMHARMGNRWSEIAKALKGRTDNSVKNRFNTTIRRQISEYTSMVRNNPA 420          
BLAST of Ggra10247.t1 vs. uniprot
Match: A0A7S0BN60 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BN60_9RHOD)

HSP 1 Score: 160 bits (406), Expect = 9.100e-45
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0
Query:  178 RVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQ 280
            RVKGPW P ED++L ELV K GARRWT IA+HI GRTGKQARERWLNQL P LTK  W+  EDR++ +AHA+LGNRW+EIAKLL GRTDNA KNRFNT++RR+
Sbjct:   21 RVKGPWSPSEDRLLVELVQKYGARRWTEIATHIHGRTGKQARERWLNQLNPQLTKTTWSESEDRVITEAHAKLGNRWAEIAKLLPGRTDNAVKNRFNTSLRRR 123          
BLAST of Ggra10247.t1 vs. uniprot
Match: A0A5J4Z7G3 (Myb-related protein A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G3_PORPP)

HSP 1 Score: 159 bits (402), Expect = 2.080e-43
Identity = 72/103 (69.90%), Postives = 89/103 (86.41%), Query Frame = 0
Query:  177 RRVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRR 279
            +++KGPWRPEED++L  LV K+G RRW+L+A+ I GRTGKQ+RERWLNQL+P L K  WT EED I+MDAH+RLGNRWSEIAKLL GRTDN+ KNRFN+TI++
Sbjct:  100 KKIKGPWRPEEDELLRSLVAKMGPRRWSLVAAQIPGRTGKQSRERWLNQLSPSLAKAPWTEEEDMIIMDAHSRLGNRWSEIAKLLNGRTDNSVKNRFNSTIKK 202          
BLAST of Ggra10247.t1 vs. uniprot
Match: A0A7S0ZEJ7 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEJ7_9RHOD)

HSP 1 Score: 159 bits (403), Expect = 2.800e-43
Identity = 74/105 (70.48%), Postives = 89/105 (84.76%), Query Frame = 0
Query:  178 RVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQIS 282
            R+KGPWR +ED++L  LV K+G RRW+LIA HI GRTGKQARERWLNQL+P L K  WT  ED I+++ HARLGN+WSEIAKLLKGR+DNA KNRFN+TIR+Q+S
Sbjct:  104 RIKGPWRSDEDEVLKSLVEKMGPRRWSLIALHIPGRTGKQARERWLNQLSPALNKIPWTAAEDLIIVEGHARLGNKWSEIAKLLKGRSDNAVKNRFNSTIRKQLS 208          
BLAST of Ggra10247.t1 vs. uniprot
Match: M1VAJ5 (MYB-related protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VAJ5_CYAM1)

HSP 1 Score: 165 bits (417), Expect = 3.060e-43
Identity = 77/113 (68.14%), Postives = 94/113 (83.19%), Query Frame = 0
Query:  177 RRVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQISQLSTHAR 289
            + VKGPWRPEED++L  LV K+G RRW+LIA HI GRTGKQARERWLNQL+P + KR WT EEDRI++ AHARLGNRWSEIA++L+GRTDNA KNRFN+ IRR  ++ +  A+
Sbjct:  261 KEVKGPWRPEEDELLRSLVEKMGPRRWSLIAEHIPGRTGKQARERWLNQLSPQICKRPWTPEEDRIIISAHARLGNRWSEIARMLQGRTDNAVKNRFNSFIRRAQAERNQAAK 373          
BLAST of Ggra10247.t1 vs. uniprot
Match: A0A7S1TIW2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIW2_9RHOD)

HSP 1 Score: 159 bits (402), Expect = 9.090e-43
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0
Query:  178 RVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQI 281
            +VKGPWRP+ED++L  LV K GA+RWTLIA+ I GR+GKQARERWLNQL+P L KR WT  ED I++  HARLGN+WSEIAK L+GRTDNA KNRFNTTIRRQ+
Sbjct:  150 KVKGPWRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQL 253          
BLAST of Ggra10247.t1 vs. uniprot
Match: A0A7S1XHT6 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHT6_9RHOD)

HSP 1 Score: 159 bits (402), Expect = 8.010e-42
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 0
Query:  178 RVKGPWRPEEDKILTELVNKLGARRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARLGNRWSEIAKLLKGRTDNATKNRFNTTIRRQI 281
            +VKGPWRP+ED++L  LV K GA+RWTLIA+ I GR+GKQARERWLNQL+P L KR WT  ED I++  HARLGN+WSEIAK L+GRTDNA KNRFNTTIRRQ+
Sbjct:  236 KVKGPWRPQEDELLQRLVEKYGAKRWTLIANSIPGRSGKQARERWLNQLSPGLAKRPWTQAEDLIIVQEHARLGNKWSEIAKKLEGRTDNAVKNRFNTTIRRQL 339          
The following BLAST results are available for this feature:
BLAST of Ggra10247.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFU12.890e-7065.43Myb-related protein A n=1 Tax=Gracilariopsis chord... [more]
Q7XZ941.080e-5755.67Transforming protein myb (Fragment) n=1 Tax=Griffi... [more]
R7Q4711.810e-5784.96MYB-related protein n=1 Tax=Chondrus crispus TaxID... [more]
A0A7S0ZEF32.630e-4671.55Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0BN609.100e-4572.82Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z7G32.080e-4369.90Myb-related protein A n=1 Tax=Porphyridium purpure... [more]
A0A7S0ZEJ72.800e-4370.48Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M1VAJ53.060e-4368.14MYB-related protein n=1 Tax=Cyanidioschyzon merola... [more]
A0A7S1TIW29.090e-4372.12Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XHT68.010e-4272.12Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 231..279
e-value: 4.1E-12
score: 56.2
coord: 179..228
e-value: 2.7E-13
score: 60.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 227..277
score: 9.88356
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 175..226
score: 11.42801
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 182..224
e-value: 1.10113E-13
score: 62.9782
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 234..277
e-value: 1.65464E-10
score: 53.7334
NoneNo IPR availableGENE3D1.10.10.60coord: 233..302
e-value: 3.0E-18
score: 67.6
NoneNo IPR availableGENE3D1.10.10.60coord: 179..231
e-value: 6.7E-20
score: 72.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..361
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 176..288
NoneNo IPR availablePANTHERPTHR45614:SF5TRANSCRIPTIONAL ACTIVATOR MYBcoord: 176..288
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 232..275
e-value: 7.0E-12
score: 45.4
coord: 180..226
e-value: 3.2E-14
score: 52.9
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 232..281
score: 20.947346
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 176..230
score: 23.39135
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 176..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:194574..195716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10247.t1Ggra10247.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 194574..195716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10247.t1 ID=Ggra10247.t1|Name=Ggra10247.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=381bp
MLQHKRSSPPPSARLGSPVTPSPAPSSPDDALHLLCLAASHNRPSHLHAS
RAHAVHNVPLSAPMVARYAAPPPHFADSHLPPQPLALYSHYAPSAPLLPL
PFAPPPPPPPASVMPAEFGAAAAAAAAAAALHHAHSAVTYAPSLLAQRQS
LLHVPLTPLPIAAQMVGAPLLSQPPPRRVKGPWRPEEDKILTELVNKLGA
RRWTLIASHIAGRTGKQARERWLNQLAPHLTKRAWTLEEDRIVMDAHARL
GNRWSEIAKLLKGRTDNATKNRFNTTIRRQISQLSTHARCPPAAAAERST
AAVAAAAASESAEAAAAAAAAATAAHQSRACGSVSEVASPVSQHDGVRGE
SRCKRKREADGSPSALQPVPQRAKSMAALS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf