Ggra10246.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10246.t1
Unique NameGgra10246.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length195
Homology
BLAST of Ggra10246.t1 vs. uniprot
Match: A0A5J6RLB9 (Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A5J6RLB9_GRALE)

HSP 1 Score: 278 bits (712), Expect = 2.210e-92
Identity = 124/182 (68.13%), Postives = 146/182 (80.22%), Query Frame = 0
Query:    1 MDNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVNDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVFEVASRLDHLVPDEDSV 182
            M++PQFWAH+HVCFRPL + FLG YS YCESAYD+NLGAPYKTSVV I NDG  HLELASYK++ P E+WMGAYEPQLL+ LT D L+ L +ACNT + W    ++Y A SRPGKGCRI+R  KE+ETYLDS I L++  Y+AWDVGRD +TDE VWG  AGPF F+V SRLDHLVPDE S+
Sbjct:   59 MEDPQFWAHVHVCFRPLRWHFLGGYSFYCESAYDYNLGAPYKTSVVRIENDGHGHLELASYKIKQPDEYWMGAYEPQLLEQLTTDQLLRLPEACNTAFVWDESKRMYTASSRPGKGCRIQRRAKEKETYLDSKITLTDHSYSAWDVGRDPETDELVWGAAAGPFDFQVVSRLDHLVPDEQSL 240          
BLAST of Ggra10246.t1 vs. uniprot
Match: R7Q5L5 (Phycocyanobilin:Cys-153 beta-phycocyanin lyase, CpcT n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5L5_CHOCR)

HSP 1 Score: 265 bits (676), Expect = 7.020e-87
Identity = 119/185 (64.32%), Postives = 146/185 (78.92%), Query Frame = 0
Query:    2 DNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVNDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVFEVASRLDHLVPDEDSVMAAS 186
            +NP FWAHI VCFRPLP+  L +Y+LYCESAYDFNLGAPYK+SVV +V++G  HLEL SYKL+ P+EFWM A+EP+LL+ LT D L+ + +ACNT YEW      Y A SRPGKGCRI RGGKE+ETYLDS I+L+E  Y AWD+G D +TDERVWGT AGPFVF   + LD+LVP+E + +A+S
Sbjct:   62 ENPVFWAHIRVCFRPLPWSLLDSYTLYCESAYDFNLGAPYKSSVVQVVHNGAGHLELVSYKLKDPEEFWMAAHEPELLEPLTADQLLQMPEACNTVYEWSPAKNAYAAYSRPGKGCRICRGGKEKETYLDSKIMLTEAQYVAWDLGLDPETDERVWGTAAGPFVFSPLANLDYLVPEEPASVASS 246          
BLAST of Ggra10246.t1 vs. uniprot
Match: A0A1X6NL70 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL70_PORUM)

HSP 1 Score: 192 bits (487), Expect = 6.780e-58
Identity = 96/179 (53.63%), Postives = 117/179 (65.36%), Query Frame = 0
Query:    1 MDNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVN--DGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVFEVASRLDHLVP 177
            ++NP FWAHIHV FRPLP+  L   S Y ESAYD+ LG PYKTSVV +V   DG+  LE  +YK++   EFW+G +EP+LLD LT D LI +   CNT Y W    ++YRA +RPGK C I R G    TYLDS  +LS + Y+ WD+GRD +TDERVWG  AGPF F    R    VP
Sbjct:   93 LENPPFWAHIHVVFRPLPWSLLDGISFYAESAYDYMLGNPYKTSVVKVVPTPDGRA-LEFENYKIKEADEFWLGGHEPELLDGLTADRLIKMPACCNTVYTWDPAERVYRAATRPGKECIIVRQGAT--TYLDSTAVLSAEGYSPWDLGRDPETDERVWGGAAGPFDFVPEKRFADDVP 268          
BLAST of Ggra10246.t1 vs. uniprot
Match: A0A5J4Z5S5 (Chromophore lyase CpcT/CpeT n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5S5_PORPP)

HSP 1 Score: 153 bits (387), Expect = 7.420e-43
Identity = 82/185 (44.32%), Postives = 104/185 (56.22%), Query Frame = 0
Query:    2 DNPQFWAHIHVCFRPLPFDFLGAY------SLYCESAYDFNLGAPYKTSVVSIVNDGQQH--LELASYKLRA-PQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVFEVASRLDHLVP 177
            +NP  WAHIHVCFRPLP  F  +       S Y ESAYD+ +  PYK SVV I    + +  LEL SYK+   P+  + G+ +  LLD  T D L  L + CN  YEW +  ++YR  +RPGK C++ +GG     YL S   L+ED Y +WD GRD DTDE +WG   G F F       H VP
Sbjct:   90 ENPPLWAHIHVCFRPLPKTFFASQGIPECISFYTESAYDYMISRPYKNSVVRIAPGTKANGTLELFSYKITENPELLFYGSRDRSLLDDFTCDHLAQLPEGCNLVYEWDAVERMYRGYTRPGKQCKMPKGG-----YLCSEATLTEDHYTSWDTGRDFDTDEILWGAAGGAFDFYPEESFAHEVP 269          
BLAST of Ggra10246.t1 vs. uniprot
Match: M2YA83 (CpcT/CpeT protein family member n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2YA83_GALSU)

HSP 1 Score: 152 bits (383), Expect = 1.680e-42
Identity = 76/178 (42.70%), Postives = 107/178 (60.11%), Query Frame = 0
Query:    1 MDNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIV--NDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVFEVASRLDHLV 176
            ++NP FW+H+ V +RPLPF+ L  +SLY ES Y   L  PY+T V  I+  NDG+  LEL  YK+   +EF+ G+   + L SLTRD L+ L + CNT   W    Q++   + PGK C + R GKE  TYL +++ +S++   +WD GR   TD+ +WG  AGPF F   +R  H V
Sbjct:   76 IENPPFWSHMRVSYRPLPFELLEGFSLYSESCYQAFLKQPYRTGVYRILARNDGKLELEL--YKIEGEEEFYQGSRNIEKLRSLTRDRLVKLPNCCNTILSWDESKQMFSGETVPGKQCIVSRKGKE--TYLHNSVTVSKEKLTSWDTGRCPKTDKLLWGAIAGPFEFYPVARFSHEV 249          
BLAST of Ggra10246.t1 vs. uniprot
Match: A9BKE0 (CpeT-like protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BKE0_HEMAN)

HSP 1 Score: 144 bits (363), Expect = 7.450e-40
Identity = 68/163 (41.72%), Postives = 102/163 (62.58%), Query Frame = 0
Query:    4 PQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVNDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVF 166
            P  W+HI + F PL    L  YS Y ESA +F+L  PYK+ V  +   G+  +E+ S+ ++ P++FW G YEP LL +LT+D L+   D CN  +++ +  +L+   ++ GK C I R G    TYLDS  +L E+ Y++ D+GR+++ DE+VWG  AGPFVF
Sbjct:   52 PTDWSHIQLGFYPLDQSLLNGYSFYTESANEFSLDEPYKSGVTLLEKKGEI-IEVKSFSIKGPEDFWYGTYEPSLLANLTKDRLVNDKDGCNLEFKYDAKKKLFLGKTKSGKQCIIPREGNP--TYLDSTAVLKENEYSSLDIGRNIENDEKVWGPSAGPFVF 211          
BLAST of Ggra10246.t1 vs. uniprot
Match: chromophore lyase CpcT/CpeT n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F99ECB (chromophore lyase CpcT/CpeT n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F99ECB)

HSP 1 Score: 132 bits (333), Expect = 1.200e-35
Identity = 71/176 (40.34%), Postives = 103/176 (58.52%), Query Frame = 0
Query:    2 DNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVNDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVFEVASRLDHLVP 177
            +NP F+AH+ VC RPLP++ L   SL+ E AYD+ L  PY++ VV ++ +  + +E+ +Y L  P+++  G+ EP+ L SL  + L  L D CN    W  ++  +     PGK C I R GK   TYLDS+  + E  + + D G D+DTDE+VWG+ AGPF F       H VP
Sbjct:   26 ENPPFFAHVRVCMRPLPWELLDGVSLFVEQAYDYMLHRPYRSRVVKLIENNNR-IEIENYVLNDPEKYLGGSREPERLSSLQAEEL-QLLDGCNMLVSWTGNS--FEGNVEPGKKCAIVRKGKT--TYLDSSFEIDERKFISHDRGFDMDTDEQVWGSVAGPFHFLRWQSFAHEVP 195          
BLAST of Ggra10246.t1 vs. uniprot
Match: A0A2T1GI76 (Chromophore lyase CpcT/CpeT n=1 Tax=Chamaesiphon polymorphus CCALA 037 TaxID=2107692 RepID=A0A2T1GI76_9CYAN)

HSP 1 Score: 132 bits (332), Expect = 2.060e-35
Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = 0
Query:    1 MDNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVS--IVNDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVF 166
            ++NP F+AHI VC RPLP++     SL+ E AYDF L  PY+  V++  I+ND    +E+  Y +    EF+  A +P++   LT D LI ++  C    EW      ++    PGKGC++ R GKE  TYLD++  +S     + D GRD++TDE +WG+ AGPF F
Sbjct:   25 IENPPFFAHIRVCMRPLPYELFDGVSLFLEQAYDFMLQNPYRLRVLNFVIIND---RIEIEHYTIDPEAEFYGAARKPEMFQQLTHDKLIKMS-GCTMITEWTGST--FKGYVEPGKGCKVTRNGKE--TYLDNSFEISPGHLISLDRGRDIETDEHIWGSIAGPFEF 184          
BLAST of Ggra10246.t1 vs. uniprot
Match: A0A7S6RH19 (Chromophore lyase CpcT/CpeT n=1 Tax=Anabaenopsis elenkinii CCIBt3563 TaxID=2779889 RepID=A0A7S6RH19_9CYAN)

HSP 1 Score: 131 bits (330), Expect = 3.300e-35
Identity = 65/165 (39.39%), Postives = 102/165 (61.82%), Query Frame = 0
Query:    2 DNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVNDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVF 166
            +NP F+AHI VC RPLP + L   SL+ E AYD+ L  PY+  V+ ++N G + +E+ +Y +++ + F+  + +   L +LT+D L  L   CN   EW  ++  ++    PGKGC + R G++  TYLDS   + E+ + + D GRD+DT+E +WG+ AGPF F
Sbjct:   26 ENPPFFAHIRVCMRPLPVELLSGVSLFVEQAYDYMLNDPYRVRVLKLLNAGDR-IEIENYTVKSEENFYGASRDLPRLQTLTKDCLEKLP-GCNMIVEWSGNS--FKGKVEPGKGCIVFRKGQK--TYLDSEFEIDEEKFISLDRGRDLDTNEHIWGSVAGPFYF 184          
BLAST of Ggra10246.t1 vs. uniprot
Match: A0A351KZ47 (Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A351KZ47_9CYAN)

HSP 1 Score: 131 bits (330), Expect = 3.390e-35
Identity = 70/175 (40.00%), Postives = 103/175 (58.86%), Query Frame = 0
Query:    2 DNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVNDGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEWQSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDVDTDERVWGTPAGPFVFEVASRLDHLV 176
            +NP F+AHI VC RPLP +FL   SLY E AYDF L  PY+  V+  V  G + +E+ +YK++  ++F+  + + + L +L  + L  +   C    EW  ++  ++A   PGKGC + R  K++ TYLDS   + E+   + D GRDV+TDE VWG+ AGPF F   +   H V
Sbjct:   26 ENPPFFAHIRVCMRPLPLEFLRGVSLYLEQAYDFALNQPYRVRVLKFVEVGSR-IEIENYKIKQEEQFYGASRDLERLQTLQTEQLEKMP-GCTFITEWTGNS--FKARVEPGKGCIVVR--KDKTTYLDSEFEIDENKLISLDRGRDVETDEHVWGSIAGPFEFVRKASFAHEV 194          
The following BLAST results are available for this feature:
BLAST of Ggra10246.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J6RLB92.210e-9268.13Phycocyanobilin lyase n=2 Tax=Gracilariopsis TaxID... [more]
R7Q5L57.020e-8764.32Phycocyanobilin:Cys-153 beta-phycocyanin lyase, Cp... [more]
A0A1X6NL706.780e-5853.63Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z5S57.420e-4344.32Chromophore lyase CpcT/CpeT n=1 Tax=Porphyridium p... [more]
M2YA831.680e-4242.70CpcT/CpeT protein family member n=1 Tax=Galdieria ... [more]
A9BKE07.450e-4041.72CpeT-like protein n=1 Tax=Hemiselmis andersenii Ta... [more]
chromophore lyase CpcT/CpeT n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F99ECB1.200e-3540.34chromophore lyase CpcT/CpeT n=1 Tax=Geitlerinema s... [more]
A0A2T1GI762.060e-3540.48Chromophore lyase CpcT/CpeT n=1 Tax=Chamaesiphon p... [more]
A0A7S6RH193.300e-3539.39Chromophore lyase CpcT/CpeT n=1 Tax=Anabaenopsis e... [more]
A0A351KZ473.390e-3540.00Chromophore lyase CpcT/CpeT n=3 Tax=Cyanobacteria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010404Chromophore lyase CpcT/CpeTPFAMPF06206CpeTcoord: 2..167
e-value: 1.9E-35
score: 122.4
IPR010404Chromophore lyase CpcT/CpeTPANTHERPTHR35137CHROMOPHORE LYASE CRL, CHLOROPLASTICcoord: 2..171
IPR010404Chromophore lyase CpcT/CpeTHAMAPMF_01460Chrphore_lyase_CpxTcoord: 1..172
score: 20.182476
IPR010404Chromophore lyase CpcT/CpeTCDDcd16338CpcTcoord: 1..167
e-value: 5.5843E-46
score: 147.846
IPR038672Chromophore lyase CpcT/CpeT superfamilyGENE3D2.40.128.590CpcT/CpeT domaincoord: 1..179
e-value: 1.4E-39
score: 137.9
NoneNo IPR availablePANTHERPTHR35137:SF1CHROMOPHORE LYASE CRL, CHLOROPLASTICcoord: 2..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:193315..193899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10246.t1Ggra10246.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 193315..193899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10246.t1 ID=Ggra10246.t1|Name=Ggra10246.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=195bp
MDNPQFWAHIHVCFRPLPFDFLGAYSLYCESAYDFNLGAPYKTSVVSIVN
DGQQHLELASYKLRAPQEFWMGAYEPQLLDSLTRDMLIPLADACNTRYEW
QSDNQLYRAMSRPGKGCRIRRGGKERETYLDSNILLSEDCYAAWDVGRDV
DTDERVWGTPAGPFVFEVASRLDHLVPDEDSVMAASGASQRRRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010404CpcT/CpeT
IPR038672CpcT/CpeT_sf