Ggra10238.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10238.t1
Unique NameGgra10238.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length151
Homology
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A2V3IFT2 (Ubiquitin domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFT2_9FLOR)

HSP 1 Score: 222 bits (565), Expect = 3.680e-72
Identity = 105/150 (70.00%), Postives = 124/150 (82.67%), Query Frame = 0
Query:    1 MGCASSKDAHRRGGAALAEWDGYIRAPKPWKVEPAISSQHLTRLRNEFWETRIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNLDEQPVHEQFKGAAKAVTDYVNAHDKSRRLARSL 150
            MGCASSK + R       +WDG+IR  + WK+E  IS++HL RLRNEFWETR+EGR EMW ALRFAAE++SDELR+ET+KAAG+RPANRR TMQ+MFDE GALY IPMYAL+DP+NLDEQP +E+FK AA+AV DYV AHDKSRR  RSL
Sbjct:    1 MGCASSKQSRRSSERESPQWDGHIRPVRAWKLERPISTEHLARLRNEFWETRVEGRPEMWQALRFAAESQSDELRDETLKAAGMRPANRRYTMQTMFDERGALYAIPMYALVDPTNLDEQPSYEEFKDAARAVADYVEAHDKSRRTPRSL 150          
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A5J4Z2P8 (Ubiquitin domain-containing protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2P8_PORPP)

HSP 1 Score: 161 bits (407), Expect = 5.030e-48
Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 0
Query:    2 GCASSKDAH-----RRGGAA-----LAEWDGYIRAPKPWKVEPAISSQHLTRLRNEFWETRIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNLDEQPVHEQFKGAAKAVTDYVNAHDKSR 144
            GCASS +A      R  GAA     +  WDG++R+  PW+VEPA++   L RLRNEFWETR+EGR EMW ALR AAE ++D+LR+E VKAAG+RPA    T+   +DE GALY++P+Y L DP NLD +P   +FK AA+AV +Y     +SR
Sbjct:    3 GCASSLNAESGKGKRNSGAAGRVAGVGAWDGHVRSVAPWRVEPAVTRAQLERLRNEFWETRVEGREEMWQALRAAAEADTDDLRDEIVKAAGIRPAAANATLLVAYDERGALYEVPIYCLRDPDNLDGEPACPEFKDAARAVQEYCERMKQSR 155          
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A7S1XEH7 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEH7_9RHOD)

HSP 1 Score: 152 bits (383), Expect = 1.730e-44
Identity = 75/139 (53.96%), Postives = 97/139 (69.78%), Query Frame = 0
Query:    1 MGCASSKDAHRRGGAALA---EWDGYIRAPKPWKVEPAISSQHLTRLRNEFWETRIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNLDEQPVHEQFKGAAKAVTDY 136
            MGC  S+     GG   A   +WDG +R    WK+E A++ +HL RLR EFWETR+EG+ EMW ALR AAE   D LR+E ++A+GLRPA+RR T+ +M+DELGALY +P+Y + DPSNL E+P  E+FK AA AV  Y
Sbjct:    1 MGCVGSRARDDDGGGTHAYDFQWDGRVRDVGDWKLELALTPEHLQRLRAEFWETRVEGKPEMWQALRAAAEALDDTLRDEIIRASGLRPASRRGTLLAMYDELGALYLVPIYCVRDPSNLGEKPAFEEFKDAAHAVKVY 139          
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A7S2ZBU4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBU4_9RHOD)

HSP 1 Score: 144 bits (362), Expect = 2.590e-41
Identity = 68/140 (48.57%), Postives = 97/140 (69.29%), Query Frame = 0
Query:    1 MGCASSKDAHRRGGAALAEWDGYIRAPKPWKVEPAISSQHLTRLRNEFWETRIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNLDEQPVHEQFKGAAKAVTDYVNAH 140
            MGC SSK+   R   AL+ WDG ++ PK W++E AI ++HL R+R EFWETR+EGR EMW AL  AAE +SDELR + V AAG++PA +R T++ ++DE GA+Y++P+Y L  P+N+D +   E+ K A   +  Y  +H
Sbjct:    1 MGCGSSKEDGGRAAEALS-WDGVVKNPKTWELERAIQTEHLQRMRAEFWETRVEGREEMWVALMAAAEADSDELRFQIVDAAGIQPALKRKTLELVYDERGAIYEVPIYCLSAPANIDGEDACEEMKDARFYLQGYYESH 139          
BLAST of Ggra10238.t1 vs. uniprot
Match: M2WA60 (F6I1.3 protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WA60_GALSU)

HSP 1 Score: 129 bits (323), Expect = 3.280e-35
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 0
Query:   14 GAALAEWDGYIRAPKPWKVEPA---ISSQHLTRLRNEFWETRIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNL 117
            G+  + W+G ++ PKPWK EP    ++   L R+R EFW+TR EGR EMW AL+ AAET  D LRNE VKAAGL PANR  T++S +DELG  Y++P+Y L DP NL
Sbjct:   35 GSTGSTWNGIVQLPKPWKAEPPFGPLTETELKRMREEFWDTRTEGRQEMWQALKAAAETTEDTLRNEIVKAAGLTPANREATLESCYDELGNYYEVPVYCLRDPDNL 141          
BLAST of Ggra10238.t1 vs. uniprot
Match: ubiquitin domain-containing protein 2-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F85170 (ubiquitin domain-containing protein 2-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F85170)

HSP 1 Score: 77.8 bits (190), Expect = 8.780e-16
Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 0
Query:   13 GGAALAEWDGY---IRAPKPWKVEPAISSQHLTRLRNEFWET--RIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNL 117
            GG++LA+ DG    I+ PKPWK    I+   L ++R+EFW+T     GR+E+W ALR AAE + D L    V +AG+   +   T+   +DE GA Y++P Y L +P+NL
Sbjct:    4 GGSSLADGDGSPKKIQKPKPWKHPQPITRTQLMKMRDEFWDTAPHYGGRTEIWDALRAAAEADLD-LAQAIVDSAGVIVRSDDLTL--CYDERGAKYELPKYVLSEPTNL 110          
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A8H7PN98 (UBD domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PN98_MORIS)

HSP 1 Score: 72.4 bits (176), Expect = 2.100e-12
Identity = 52/158 (32.91%), Postives = 70/158 (44.30%), Query Frame = 0
Query:    1 MGCASSKDAHRRGGAALAEWDGYIRAPKP-------WKVEPAISSQHLTRLRNEFWETR--IEGRSEMWHALRFAAETESD-ELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNLDEQPVHEQFKGAAKAVTDYVNAHDKSRRLAR 148
            MGC SS +A+   G   +   G+    KP       W   P I+   L + R+ FW+T    EGR E+W AL+ AA TE D  L    + AAG+            +DELG  Y +P+Y L+DP+NL   P        A     Y N    S  L +
Sbjct:    1 MGCCSSSEANSDEGGYASRNRGFRAGNKPFKRKGIKWTANPPITEDQLQQQRDTFWDTAPSYEGRPEIWQALK-AATTEMDVSLAQSILDAAGITMPTGN-PADGCYDELGNEYTVPIYCLVDPTNLLPAPTVSSGTHMASTSQAYCNQETYSPPLQK 156          
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A2U1QJT6 (Ubiquitin domain-containing protein 1 n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QJT6_ARTAN)

HSP 1 Score: 68.6 bits (166), Expect = 4.140e-12
Identity = 40/98 (40.82%), Postives = 58/98 (59.18%), Query Frame = 0
Query:   24 IRAPKPWKVEPAISSQHLTRLRNEFWET--RIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDE--LGALYDIPMYALIDPSNL 117
            IR P+PW    AI+   L  LR EFW+T     G+ E+W AL+ AAE+E  +L    V +AG+   N   T+   +DE   GA+Y++P+Y L +P+NL
Sbjct:   21 IRKPEPWSHTEAITRVQLNALREEFWDTAPHYGGKQEIWDALKAAAESEI-QLAQAIVSSAGIIVQNPDLTL--CYDERVTGAMYELPLYVLSEPTNL 115          
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A0V0R5Y3 (Ubiquitin-like domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R5Y3_PSEPJ)

HSP 1 Score: 70.1 bits (170), Expect = 1.080e-11
Identity = 36/102 (35.29%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   24 IRAPKPWKVEPAISSQHLTRLRNEFWETRIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNLDEQPVHEQ 125
            I+    +KV+  ++ + L R R EFWETR+EG+ + W AL+ A E++ ++L    + AAG++  NR  ++Q  +D+ G  YDIP++ + DP + + +P  E+
Sbjct:   60 IKRTHSYKVK--VTKEQLERKRQEFWETRVEGKQQTWQALKSAVESD-EKLAIGLLAAAGIKLVNR--SIQISYDDTGHKYDIPVFCINDPYSCEAEPPTEK 156          
BLAST of Ggra10238.t1 vs. uniprot
Match: A0A118JT92 (UBD domain-containing protein n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JT92_CYNCS)

HSP 1 Score: 67.8 bits (164), Expect = 1.460e-11
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   24 IRAPKPWKVEPAISSQHLTRLRNEFWET--RIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDELGALYDIPMYALIDPSNLD 118
            +R P+PW+    I+ + LT +RN FW       GR E+W ALR AAE++    +   +   G+R  N   T+   +DE GA Y++P+Y L +P+NL+
Sbjct:   29 LRKPRPWRHNRPITGEQLTNMRNMFWHNAPHFGGRQEIWSALRAAAESDLPYAQ-AIIDNNGIRVENPYMTV--CYDEGGARYELPLYVLAEPTNLE 122          
The following BLAST results are available for this feature:
BLAST of Ggra10238.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFT23.680e-7270.00Ubiquitin domain-containing protein 1 n=1 Tax=Grac... [more]
A0A5J4Z2P85.030e-4852.29Ubiquitin domain-containing protein 2 n=1 Tax=Porp... [more]
A0A7S1XEH71.730e-4453.96Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZBU42.590e-4148.57Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2WA603.280e-3555.14F6I1.3 protein n=2 Tax=Galdieria sulphuraria TaxID... [more]
ubiquitin domain-containing protein 2-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F851708.780e-1641.82ubiquitin domain-containing protein 2-like n=1 Tax... [more]
A0A8H7PN982.100e-1232.91UBD domain-containing protein n=1 Tax=Mortierella ... [more]
A0A2U1QJT64.140e-1240.82Ubiquitin domain-containing protein 1 n=2 Tax=Arte... [more]
A0A0V0R5Y31.080e-1135.29Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A118JT921.460e-1137.11UBD domain-containing protein n=2 Tax=Cynara cardu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032752DC-UbP/UBTD2, N-terminal domainPFAMPF16455UBDcoord: 24..119
e-value: 5.2E-19
score: 68.3
IPR038169DC-UbP/UBTD2, N-terminal domain superfamilyGENE3D1.20.225.20coord: 37..111
e-value: 6.5E-16
score: 60.3
IPR039869Ubiquitin domain-containing protein 1/2PANTHERPTHR13609UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATEDcoord: 20..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:181647..182200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10238.t1Ggra10238.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 181647..182200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10238.t1 ID=Ggra10238.t1|Name=Ggra10238.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=151bp
MGCASSKDAHRRGGAALAEWDGYIRAPKPWKVEPAISSQHLTRLRNEFWE
TRIEGRSEMWHALRFAAETESDELRNETVKAAGLRPANRRCTMQSMFDEL
GALYDIPMYALIDPSNLDEQPVHEQFKGAAKAVTDYVNAHDKSRRLARSL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032752DC-UbP/UBTD2_N
IPR038169DC-UbP/UBTD2_N_sf
IPR039869UBTD1/2