Ggra10225.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10225.t1
Unique NameGgra10225.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length351
Homology
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A2V3ILH3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILH3_9FLOR)

HSP 1 Score: 408 bits (1049), Expect = 2.430e-140
Identity = 208/247 (84.21%), Postives = 225/247 (91.09%), Query Frame = 0
Query:    8 DASAQIRRPVPMPSLSALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMALTLAPTDSLPLNTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGVFSI 254
            DAS Q  R   +PSLSALKAGMPGAAAAACQ ASFMWLSTTAAFQYRSG T  QAL+ LYAQGGV RFYSG+ PTVLH+TLCRFGDTTANN+ALTLAP DSLPLNTLCASFA  AWRA+LLPLET+RSNMQVRGP GF LV+DRFR++GF GLYRGSAASFSAG+VGHFPFFFTVNVVSQAVPL+EDAS LA +GRNGGMGFLAAMSAD+FTNGFKV+A NKQTCDKGLSYYEVARKI++RDGVFSI
Sbjct:   10 DASVQPLRSRVLPSLSALKAGMPGAAAAACQAASFMWLSTTAAFQYRSGFTTLQALRTLYAQGGVARFYSGVLPTVLHITLCRFGDTTANNVALTLAPFDSLPLNTLCASFAGGAWRASLLPLETLRSNMQVRGPAGFMLVLDRFRSSGFRGLYRGSAASFSAGVVGHFPFFFTVNVVSQAVPLTEDASILAKIGRNGGMGFLAAMSADVFTNGFKVVATNKQTCDKGLSYYEVARKIMRRDGVFSI 256          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A5A8BYU3 (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BYU3_CAFRO)

HSP 1 Score: 190 bits (483), Expect = 1.110e-54
Identity = 108/237 (45.57%), Postives = 145/237 (61.18%), Query Frame = 0
Query:   24 ALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMALTLAP----TDSLPL--NTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGVFSI 254
            AL  G+PGAAA   Q  S MWL TT  +QYR G T RQAL+ LYA+GGVRRFY GLAP +    L RFGDT AN   L L      T SLP+   T  AS AAA WR  L+P++T+++ +QV G  G +++  + R +G   LY G+  +F+A  VGHFP+FFT N +  +  LS   S  A + RN G+GF A+  +D  +N  +VL   +QT +  +SY E AR I+ +DG+F +
Sbjct:   25 ALGGGLPGAAAMGVQVLSLMWLRTTMNYQYRHGTTTRQALRKLYAEGGVRRFYRGLAPALFQGPLSRFGDTAANAGMLALLDHYDSTRSLPVAAKTAAASTAAALWRICLMPIDTLKTTLQVEGARGMTILASKMRTSGPVVLYYGAMGAFAATWVGHFPWFFTYNFLDAS--LSVPDSLAAKLARNAGIGFAASCVSDTSSNSIRVLKTYRQTAEVKVSYVEAARSIIAKDGLFGL 259          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A553NZG9 (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NZG9_TIGCA)

HSP 1 Score: 177 bits (448), Expect = 1.180e-49
Identity = 96/245 (39.18%), Postives = 143/245 (58.37%), Query Frame = 0
Query:   16 PVPMPSLSALK----AGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMALTLAPTDSLP--LNTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGVFSI 254
            P+P P  +AL+     G  GA A   Q  + MW+ TT  +QYR G T  QA++ LY QGG+RRFY GLAP +    + RFGDT AN           LP  L T CAS AA  WR  ++P++ +++ +QV G DG +L+  + +  G   L+ G+ A+ SA  VGHFP+F T N + + +PL+E  S +   GRN G+GF +++ +D  +N  +V+   +QT  + ++Y EV R ++K DGV  +
Sbjct:   12 PLPTPLRAALEKAVQGGKSGAMAMTIQCCTMMWIRTTMNYQYRYGTTTTQAMRTLYQQGGIRRFYRGLAPALFQGPISRFGDTAANAGVNAYLKDSDLPVALRTFCASTAAGGWRIMIMPIDCLKTTLQVEGRDGVALLGKKIKARGPFVLWHGALAAASATAVGHFPWFVTFNYLQETIPLAE--STVGNFGRNAGIGFCSSVVSDTISNSLRVIKTTRQTYSEAVTYPEVVRHVIKEDGVLGL 254          
BLAST of Ggra10225.t1 vs. uniprot
Match: R1DMQ3 (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DMQ3_EMIHU)

HSP 1 Score: 177 bits (449), Expect = 1.570e-49
Identity = 99/233 (42.49%), Postives = 142/233 (60.94%), Query Frame = 0
Query:   24 ALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMALTLAPTDS----LP--LNTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDG 250
            AL  G+ GA A A Q  + MW+ TT  FQYR G+T R+A++ LYAQGGVRRFY G+AP ++   L RFGDT AN   ++L  ++     LP  + TL ++ AAA WR  L+PL+TV+S MQV GPDG S +  + R  G A L+ G     S+  +GH+ ++ T N +   VP  +  +   T+GRN  +GF+A+  AD  TN  +V+   +QT  + ++Y E AR +V+ DG
Sbjct:   43 ALGGGIAGAGAMAFQVTTLMWIRTTITFQYRYGSTTREAMRTLYAQGGVRRFYQGVAPALVQAPLSRFGDTAANAGVISLLNSNESSAWLPTGVKTLASASAAAGWRVILMPLDTVKSMMQVEGPDGLSKLRAKLRTGGLAVLFHGGGGLVSSAFLGHYLWYGTFNHLDTVVPKQQGLA--PTLGRNAAVGFVASAVADTATNSLRVVKTFRQTSLESVTYAEAARLVVQSDG 273          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A5E8CHG8 (Mitochondrial carrier protein n=1 Tax=seawater metagenome TaxID=1561972 RepID=A0A5E8CHG8_9ZZZZ)

HSP 1 Score: 171 bits (434), Expect = 1.160e-47
Identity = 94/234 (40.17%), Postives = 139/234 (59.40%), Query Frame = 0
Query:   24 ALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTAN---NMALTLAP-TDSLPL--NTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGV 251
            A+ +G+ GA+A A Q  S MWL TT  +QYR G T   AL+ LY +GG+ RFY G  P +L   + RFGDT AN   N  L   P T  LP+   TL AS  A  WR  L+P++T ++ MQV G +G  ++  + +  G   LY G+  ++SA +VGHFP+F+T N++  ++P   D + +  + RNGG+GF A++ +D  +N  +V+   KQT D  +SY +    I+K DG+
Sbjct:   15 AVNSGISGASAMAIQVTSLMWLRTTMNYQYRYGTTTTNALKSLYKEGGILRFYRGYLPALLQAPISRFGDTAANMGMNTYLNSNPNTKDLPIAAKTLMASMTAGIWRIFLMPIDTTKTIMQVEGKNGLGMLGSKIKKGGPGVLYHGALGAYSATVVGHFPWFYTYNILDDSLP-KYDTTIMKFI-RNGGIGFTASVVSDCSSNSLRVIKTTKQTFDTPISYKDTVNHIIKNDGI 246          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A7S3V5E4 (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E4_9STRA)

HSP 1 Score: 170 bits (430), Expect = 5.680e-47
Identity = 98/235 (41.70%), Postives = 141/235 (60.00%), Query Frame = 0
Query:   23 SALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMALTLAPT-DS-----LPLNTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGV 251
            SAL+ G  GA A     A  MW+ TT  +QYR+G T   AL+ LYA GG+ RFY G+ P +    L RFGDT AN   LTL  + DS     + + T+CAS AAAAWR  L+P++TV++ MQV G   FS VV++ + +G   LY GS AS SA  VGH+P+FFT N +S+ +P  +D   L  +GR   +GF ++  +D  +N  +++   KQ+  + +SY +V + ++   GV
Sbjct:   22 SALRGGTAGACAMGANVACLMWMRTTVNYQYRNGTTFPVALKTLYADGGIPRFYRGVLPALAQGPLSRFGDTAANTGVLTLLNSFDSTKDMGVGVKTVCASAAAAAWRICLMPIDTVKTTMQVTG--SFSNVVNKIKASGPTVLYHGSLASASATFVGHYPWFFTYNYLSEKIPKQDDQ--LRELGRRAILGFCSSAISDTCSNSIRIVKVYKQSSTEAISYPQVVKNVIAESGV 252          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A6V1RVG8 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RVG8_HETAK)

HSP 1 Score: 170 bits (431), Expect = 5.890e-47
Identity = 98/245 (40.00%), Postives = 145/245 (59.18%), Query Frame = 0
Query:   13 IRRPVPMPSLSALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMAL----TLAPTDSLPL--NTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGV 251
            +  P+  P   AL  G  GA A A    + MW+ TT  FQYR G +  QA++ LY +GG+RRFYSG +  + H  L RFGDT AN   L    TL  T SLP+   ++CAS AAA +R  ++P++TV+S +QV G  G S+++++ R +G   LY GS A+ SA  +GH+P+F T N +  ++P  +  +    + R+  +GF ++  AD+ +N  +VL   KQT    +SYYE  R IV +DG+
Sbjct:   25 VAAPIQAPLAQALSHGFAGAGAMAVNVTTLMWVRTTTYFQYRHGLSTSQAIRALYKEGGIRRFYSGYSLALFHGPLSRFGDTAANAGVLCALDTLDSTRSLPIAFKSVCASAAAAGFRILIMPIDTVKSVLQVEGKSGISILMNKVRTSGPKTLYHGSLAAASATFLGHYPWFATFNYLDASLPQYDSTT--GKLFRSAVIGFTSSAMADLCSNSVRVLKTFKQTNGTSISYYEAGRCIVAQDGM 267          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A2K3CTE6 (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CTE6_CHLRE)

HSP 1 Score: 168 bits (426), Expect = 1.040e-45
Identity = 104/264 (39.39%), Postives = 147/264 (55.68%), Query Frame = 0
Query:    7 ADASAQIRRPVPMPSL----------SALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMALTLAP----TDSLPLN--TLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGVFSI 254
            A+++A   RP P P             AL  G+PG AA A Q  S MWL TT  +QYR G     AL+ LY +GGVRRFY GL P ++   L RFGDT AN   L+L      T  LP+   TL AS AA  +R  L+P++TV++ MQV G D  + +  +    G   LY G+ AS +A  VGH+P+F T N ++  +P +      A +GR+  MGF ++  +D  +N  +V+   KQT  + +SY +VAR I+++DGV  +
Sbjct:   12 AESTATTTRPAPSPKPLGQVLADAGNKALGGGLPGMAAMATQVLSLMWLRTTINYQYRYGTDTTTALRTLYKEGGVRRFYRGLLPAMVQGPLSRFGDTAANAGTLSLLDAYPSTAGLPVGVKTLVASTAAGCFRVLLMPVDTVKTIMQVEGKDAVAALWRKVATGGPGVLYHGALASAAATFVGHYPWFATYNYLNAVLPKAPADDLKAKLGRSAIMGFCSSFVSDCCSNSIRVIKTTKQTTREPMSYPQVARMIIEKDGVLGL 275          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A0L0FNE2 (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNE2_9EUKA)

HSP 1 Score: 167 bits (422), Expect = 1.140e-45
Identity = 91/237 (38.40%), Postives = 136/237 (57.38%), Query Frame = 0
Query:   24 ALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMALTLAP----TDSLPLN--TLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGVFSI 254
            A+  G+PGA A      S MWL TT  +QYR G +  +A + LY +GG+RRFY G  P +    L RFGDT AN   L L      T +LP+   T+ AS AAA WR  L+P++T+++ MQV G  G S +  +  + G   LY G+ A+  A  VGH+P+FF  N++ + +P +E    L  +GRN  +GF A++ +D  +N  +V+   KQT    +SY E  + ++K+DG+  +
Sbjct:   29 AIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGL 265          
BLAST of Ggra10225.t1 vs. uniprot
Match: A0A382CHY1 (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382CHY1_9ZZZZ)

HSP 1 Score: 166 bits (420), Expect = 1.420e-45
Identity = 93/237 (39.24%), Postives = 140/237 (59.07%), Query Frame = 0
Query:   24 ALKAGMPGAAAAACQTASFMWLSTTAAFQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANN---MALTLAPTD---SLPLNTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVDRFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLATVGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDGVFSI 254
            AL  G+ G+ A   Q  S MW+ TT  +QYR+G T   AL+ LY +GG+RRFY GLAP ++   L RFGDT AN     AL   P     S+   T CAS AAA WR  L+P++ V++NMQV G  G   +  + + +G   LY GS A++SA  VGH+P+F T N ++  +P S+D   L  + RN  +GF +++ +D  +N  +V+   KQ+    +SY E  ++++++DG+  +
Sbjct:   17 ALGGGVSGSLAMVTQVCSLMWVRTTMNYQYRNGHTTSVALKNLYREGGIRRFYRGLAPALVQGPLARFGDTAANAGVIYALNENPNTKNLSISTKTFCASSAAALWRICLMPIDAVKTNMQVHGKVGVEQLFSKVKTSGPRVLYHGSLAAYSATFVGHYPWFVTYNYLNAYLPKSDD--MLQNLARNATIGFSSSVCSDSCSNSIRVVKTYKQSSKIPVSYPESVKQVIQKDGIMGL 251          
The following BLAST results are available for this feature:
BLAST of Ggra10225.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILH32.430e-14084.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5A8BYU31.110e-5445.57Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A553NZG91.180e-4939.18Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
R1DMQ31.570e-4942.49Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A5E8CHG81.160e-4740.17Mitochondrial carrier protein n=1 Tax=seawater met... [more]
A0A7S3V5E45.680e-4741.70Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6V1RVG85.890e-4740.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2K3CTE61.040e-4539.39Uncharacterized protein n=3 Tax=Chlamydomonas TaxI... [more]
A0A0L0FNE21.140e-4538.40Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A382CHY11.420e-4539.24Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10Mitochondrial carrier domaincoord: 18..255
e-value: 1.9E-18
score: 68.3
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 17..142
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 111..253
NoneNo IPR availablePANTHERPTHR47567MITOCHONDRIAL SUBSTRATE/SOLUTE CARRIERcoord: 23..251
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 107..188
score: 10.156025

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:154430..155676 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10225.t1Ggra10225.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 154430..155676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10225.t1 ID=Ggra10225.t1|Name=Ggra10225.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=351bp
MYSSAGADASAQIRRPVPMPSLSALKAGMPGAAAAACQTASFMWLSTTAA
FQYRSGATLRQALQLLYAQGGVRRFYSGLAPTVLHVTLCRFGDTTANNMA
LTLAPTDSLPLNTLCASFAAAAWRATLLPLETVRSNMQVRGPDGFSLVVD
RFRNAGFAGLYRGSAASFSAGLVGHFPFFFTVNVVSQAVPLSEDASFLAT
VGRNGGMGFLAAMSADIFTNGFKVLANNKQTCDKGLSYYEVARKIVKRDG
VFSISPVSCEQDSVRLTNPDLHFAPISPACVESTVILNNARLAFSAYSRI
GFRGMSHTFLLCHLQSLSSIVCCLCAGSVDLGQAQVCIVPHNNTRTRLAH
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier