Ggra10223.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10223.t1
Unique NameGgra10223.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length369
Homology
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BLAST of Ggra10223.t1 vs. uniprot
Match: A0A2V3IFS3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFS3_9FLOR)

HSP 1 Score: 233 bits (593), Expect = 4.770e-70
Identity = 141/335 (42.09%), Postives = 208/335 (62.09%), Query Frame = 0 
Query:   27 RHIKLTA---LDENRVPVDNQIQAALEDLRCLKHQLTALRSKDIFLRKLREAQSLEQMPSAQEAVGAEMRLQKKKSELRKQKAARASAEKRFESAVMETCLTEKRYNDTYQLAQNRVRRIKSASLTKQLVAKMNNDEWPSVMRLFDDVAEVDKLEGADCEQLSDIFKKERVKLEAEANRTNLEVADLEKRLNRVEQSAGVCEREIEGVKKRFAKKERRDRQFGDVLHEYELQKHLQQILPSIVGVRVAAVQSDGILFDINANLFVPSDGSVDRRQATHSLMVKRGSIGVRGTN--ELILSPADVEVDDLVDQPNNVVLAVVIKEVCARLRNFMER 356
            RH +L A   L++N +PVD QIQA L+DLR LK++L A R+K IFL+ LR+A+ ++ +P+AQ+AV AE++LQK KSELRK KA R++ E+RFE+AV +       +    Q  ++R+   ++ + T  +  ++   +W SV R FDD+ EVD L+   C  L ++ +KE++K EA+++    ++  + + +  +E +  + + +   + +R  K E  D  F  + HEYELQK LQ ILPSI GVRVA V+ +G+ F+INA LFVP      R Q THSL+VK         N  EL L+PADV VDDL  +  N+ L  V++ VCARL  FM R
Sbjct:   23 RHKQLIAGRTLEKNAIPVDIQIQAELDDLRHLKYELNAFRTKRIFLQNLRDARDVQDLPTAQQAVSAEIKLQKMKSELRKTKAERSALERRFENAVRDLGEASADHLHACQSMKHRIHLYRADTYTDNVEKQIKLGDWESVFRSFDDIEEVDSLQVPHCRTLINLLRKEKLKFEAQSDHNKPQLQQIHQHVRHLENNVDMLKEKQHALNQRIHKFEHSDPAFSKLRHEYELQKQLQHILPSITGVRVADVRVNGVCFEINAMLFVPFVDGTKRDQKTHSLIVKVDENCDTANNVVELCLTPADVRVDDLFGRDENMSLRFVVQTVCARLAEFMAR 357
The following BLAST results are available for this feature:
BLAST of Ggra10223.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFS34.770e-7042.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..227
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableCOILSCoilCoilcoord: 94..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:147998..149104 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10223.t1Ggra10223.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 147998..149104 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10223.t1 ID=Ggra10223.t1|Name=Ggra10223.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=369bp
MEDQVAFLQRITNEFQQHPPYAPAHDRHIKLTALDENRVPVDNQIQAALE
DLRCLKHQLTALRSKDIFLRKLREAQSLEQMPSAQEAVGAEMRLQKKKSE
LRKQKAARASAEKRFESAVMETCLTEKRYNDTYQLAQNRVRRIKSASLTK
QLVAKMNNDEWPSVMRLFDDVAEVDKLEGADCEQLSDIFKKERVKLEAEA
NRTNLEVADLEKRLNRVEQSAGVCEREIEGVKKRFAKKERRDRQFGDVLH
EYELQKHLQQILPSIVGVRVAAVQSDGILFDINANLFVPSDGSVDRRQAT
HSLMVKRGSIGVRGTNELILSPADVEVDDLVDQPNNVVLAVVIKEVCARL
RNFMERRQLGTAALKNGR*
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