Ggra10218.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10218.t1
Unique NameGgra10218.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length487
Homology
BLAST of Ggra10218.t1 vs. uniprot
Match: A0A2V3ILG7 (Putative ATP-dependent RNA helicase ddx52 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG7_9FLOR)

HSP 1 Score: 476 bits (1224), Expect = 1.850e-161
Identity = 269/483 (55.69%), Postives = 334/483 (69.15%), Query Frame = 0
Query:    1 MQHDPLRALLRGCSVPSASRASIRPPSSTTTPKSSHLDFFNQKRSANDSASPKLSSSFQKLVPNEKIQAALVKLEITSPTPVQ-----------------------------------QRQQRVKQP--HALILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAAAEEIRFSA--PSYLVLDEADELFDERFLPQLDQVLHVCGA------RAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRLGERVRRDEVKRLEKRPPKRGRVGGPNRASL 438
            M HDPLRAL+RGC      RA  +P                          P  + +F +L+P+ +IQ+AL  L++ +PT +Q                                   Q  QR + P  H++ILAPT EL  QI+RVL R+L+L H +AHVR L ++ ++AAW +AP AV+F+IATP+RL+AAA+ ++ S+  P ++VLDEADEL  ++FLPQ+D  LHVCG             RMH+FSAT+ P VA LA  LM D+KRVTVGAS +GGSFAVDEAV HI+QRFVFVGGR EQGKVMAVRNL+RNG++ PVL+FVQ+K+RAA LFREL++DGVHVDAIH+DRT AAR +AV RFR G  WVLIATDVL+RGLDFLAV+TVINYD+PSS AAYVHRIGR GRNG+ G A++LFTEED K++G VVRVA ASGA VP+WLLR G RVR DEV+RLE+RPPKR  VGGPN AS+
Sbjct:    1 MLHDPLRALMRGC-----RRAPKQPAXXXXXXXXXXXXXXXXXXXXXXXPPP--APTFAELLPDARIQSALHALQVRAPTAIQAAVIPHFHTNDVLAVAPTGSGKTLCYVLPLLTHHLQLAQRQQPPRCHSVILAPTHELVNQIARVLERVLKLTHTRAHVRALNSKQALAAWNSAPNAVNFVIATPQRLVAAAQLLKSSSSTPDFIVLDEADELLSDKFLPQVDDALHVCGVVNKANNHKHGSQRMHMFSATMAPAVAHLARCLMNDMKRVTVGASAYGGSFAVDEAVKHIEQRFVFVGGRAEQGKVMAVRNLLRNGVQAPVLLFVQSKERAAQLFRELLYDGVHVDAIHSDRTVAARETAVQRFREGNTWVLIATDVLSRGLDFLAVRTVINYDVPSSAAAYVHRIGRCGRNGRHGVALSLFTEEDLKLIGAVVRVARASGALVPEWLLRAGGRVRADEVRRLERRPPKRAAVGGPNMASV 476          
BLAST of Ggra10218.t1 vs. uniprot
Match: R7QFR3 (DEAD (Asp-Glu-Ala-Asp) box polypeptide n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFR3_CHOCR)

HSP 1 Score: 404 bits (1038), Expect = 1.370e-132
Identity = 249/526 (47.34%), Postives = 319/526 (60.65%), Query Frame = 0
Query:    1 MQHDPLRALLRGC-----------SVPSASRASIRPPSSTTTPKSSHLDFF---NQKRSAND---SASP---------KLSSSFQKLVPNEKIQAALVKLEITSPTPVQQRQ--------------------------------------QRVKQPHALILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAA--AEEIRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRLGERVRRDEVKRLEKRPPKRGRVGGPNRASLKHGGSKKRRTAPRDEQHKSEAD 460
            M  DPLRALLRGC           S  SA    IR PSS     S  LDFF   +++    D   S+SP           S+     V +  ++AAL  + I SPT VQ+R                                       Q    PHAL+LAPTRELAEQI RV TRL     V A ++ + ++A+ A  KAA   +  +IATP RL+A   A  I     +++VLDEADELF   FL Q+D VL  CG++  D  R+H+FSAT PP +  LA  L+K  K++ +    +GGS AV    + I+Q+F+FVGGRGEQGKVMAVR L++ G++ P+L+FVQTKDRAA+L+RELV+DGV V+AIHADR+  AR  AV RFR G++WVLIATDVLARGLDFLAV++V+NYDMPSS +AYVHRIGRT        A+TLFTEEDR ++G V++VA  SGADVP+W L+L + VR+D V+R+EKRPP R R+GGPNR S+     K++R   R    K EAD
Sbjct:    1 MVDDPLRALLRGCHGAAVASWKSKSAASARAELIRTPSSAAL--SRELDFFGTSSKRLEVTDKAQSSSPGRNNVKSVAPTSADMSAAVASPTLEAALAHMGIVSPTAVQRRAIPAMRAGNDVVAVAPTGSGKTLAYAVPLLSELLSGSRAQHRSAPHALVLAPTRELAEQIGRVFTRLSSEARVNARIKIVCSKAAAAGLKAADGLIDIVIATPMRLVATHQAGAINLGRVAHVVLDEADELFAGNFLEQVDDVLASCGSQLKDGTRVHMFSATFPPAIETLAQGLLKKQKKIVIDGGAYGGSAAVGGVAARIEQKFMFVGGRGEQGKVMAVRGLLKEGLRAPILLFVQTKDRAAELYRELVYDGVKVEAIHADRSQQARMRAVERFRTGEVWVLIATDVLARGLDFLAVESVVNYDMPSSASAYVHRIGRTXXXXXXXTAVTLFTEEDRVLLGPVLKVAKVSGADVPEWALKL-KGVRKDVVRRMEKRPPTRKRIGGPNRGSIGKRHKKEKRLESRSRTEKGEAD 523          
BLAST of Ggra10218.t1 vs. uniprot
Match: A0A7S3A9B4 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9B4_9RHOD)

HSP 1 Score: 294 bits (753), Expect = 5.690e-90
Identity = 170/352 (48.30%), Postives = 230/352 (65.34%), Query Frame = 0
Query:   95 LILAPTRELAEQISRVLTRLLQLCHV-----------KAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAA--AEEIRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRL--GERVRRDEVKRLEKRPPKRGRVG 431
            LIL PT+ELAEQ++RV  R L    V           KAHV  L    S        K  + I+ATP RL+ A  +  +  S    L+LDEAD+LF++ F+ QLD+VL   G +   K R+HLFSAT+PP V E+A ++MK   ++ VG   +GG  A  +A S + QRF+F  G+GE GKV A R L+  G+ PP LVFVQ++DRA+ LF+ELVFDGV++DAIHA+RTAA R++AV  FR+G++W+LIATD++ARG+DF  + TV+NYD+P+S  AYVHRIGR         AIT FTE+D+ ++  +V VA ASGA+VP W+L +  GERV+       EKR P+R R+G
Sbjct:  176 LILVPTKELAEQVARVTQRFLDAAKVDDQIKLKLVVSKAHVSGLAGGGS--------KRANIIVATPMRLIHAIRSRAVELSRVRDLILDEADKLFEDGFMDQLDEVLTATGGK---KTRVHLFSATLPPKVEEIARTVMKTPVKIIVGGQSYGGGTAAVDA-STVKQRFMFADGQGEAGKVAAFRRLLTEGLMPPTLVFVQSQDRASQLFKELVFDGVNIDAIHANRTAAQRSTAVENFRSGRVWILIATDLMARGIDFRTINTVVNYDLPASPIAYVHRIGRXXXXXXXXQAITFFTEDDKPLLRKIVNVAVASGAEVPKWMLDIKPGERVK---ASLQEKRQPRRDRIG 512          
BLAST of Ggra10218.t1 vs. uniprot
Match: A0A6T6PCA6 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6PCA6_9RHOD)

HSP 1 Score: 258 bits (658), Expect = 1.950e-79
Identity = 144/289 (49.83%), Postives = 195/289 (67.47%), Query Frame = 0
Query:   95 LILAPTRELAEQISRVLTRLLQLCHV-----------KAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAA--AEEIRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNG 370
            LIL PT+ELAEQ++RV  R L    V           KAHV  L    S        K  + ++ATP RL+ A  ++ +  S    L+LDEAD+LF++ F+ QLD++L   G +   K R+HLFSAT+PP V E+A ++MK   +V VG   +GG  A  +A S + QRF+F  G+GE GK+ A R L+  G+ PP LVFVQ++DRA+ LF+ELVFDGV++DAIHA RTAA R++AVA FR+G++W+LIATD++ARG+DF  + TV+NYD+P S +AYVHRIGRTGR G
Sbjct:    3 LILVPTKELAEQVARVTQRFLNAAQVDDQIKLKLVVSKAHVSGLAGGGS--------KRANILVATPMRLVHAIRSQAVELSRVRDLILDEADKLFEDGFMDQLDEILTATGGK---KTRIHLFSATLPPKVEEVARTVMKTPVKVVVGGRSYGGGTAAVDA-STVKQRFMFADGQGEAGKIAAFRRLLVEGLMPPTLVFVQSQDRASQLFKELVFDGVNIDAIHASRTAAQRSTAVANFRSGRVWILIATDLMARGIDFRTINTVVNYDLPVSPSAYVHRIGRTGRAG 279          
BLAST of Ggra10218.t1 vs. uniprot
Match: L1J3V1 (RNA helicase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J3V1_GUITC)

HSP 1 Score: 264 bits (674), Expect = 2.050e-79
Identity = 157/337 (46.59%), Postives = 220/337 (65.28%), Query Frame = 0
Query:   95 LILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHF--IIATPRRLLAAAEE--IRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRLGERVRRDEVKRLEKRPPKR 427
            LI++PTRELA QI      L     ++  + T  T ASVAA +  P+A +   +++TP RL++  ++  +  S+   L++DEAD+LF+E F+ QLD++L  C  R   K    LFSATIPP + ELA S+M     VTVG S  G       A S I Q+ VFVG   E+GK++A+R LI+ G+KPPVL+FVQ+ DRA  LFRELV+DG++VD +HA+RT A R + +++FR+G IWVLI TD++ARG+DF  V  VINYD P S  +Y+HRIGRTGR G+ G A+T FT ED   +  +  V   SG DV DW+L+L ++  + + K L+K+ P+R
Sbjct:  110 LIVSPTRELATQIFNQCKLLKAFSKLQVKLLTKATAASVAALQMDPQARNHDVVVSTPARLVSLLQQKSLDLSSVELLIVDEADKLFEEGFITQLDEILAACSNRKLQKS---LFSATIPPQIEELARSIMPHPTFVTVG-SKVG-------ANSKIKQKLVFVGS--EEGKLIAIRQLIQTGLKPPVLMFVQSIDRAKQLFRELVYDGINVDVMHAERTQAQRDNIISQFRSGAIWVLICTDLMARGIDFKGVNLVINYDFPQSTISYIHRIGRTGRGGREGEAVTFFTGEDVLYLRSIANVMKQSGCDVADWMLQL-KKPGKKKAKMLKKKAPER 432          
BLAST of Ggra10218.t1 vs. uniprot
Match: I1BTN3 (RNA helicase n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BTN3_RHIO9)

HSP 1 Score: 256 bits (654), Expect = 1.560e-75
Identity = 154/335 (45.97%), Postives = 207/335 (61.79%), Query Frame = 0
Query:   94 ALILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAAAEE--IRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRLGERVRR--DEVKRLEKRP 424
            ALI+APTRELA+QI+R  T L Q   ++ +V +  T A  +    + +    ++ TP RL+ A +E  +  SA  +LVLDEAD+L D+ FL Q D++   C +    K    LFSAT    V ELA S+MKD  R+ +GA         + A   I Q  +F G   E GK +A+R LI+ G+KPPVL+FVQ+ DRA +LF ELVFDG++V+ IH+DRT A R   +  FR GKIWVLIATD++ARGLDF  V  VINYD P + A+Y+HRIGRTG     G A+T +T++D   +  VV V   SG DVPDW+L +    ++   E+KR  KRP
Sbjct:  213 ALIIAPTRELAQQIAREATILAQDTKLRINVLSKATAADKSQTPESRQKFDILVTTPLRLVYAIKEKEVDLSAVRHLVLDEADKLLDQGFLDQTDEIFAACSSTTIQKS---LFSATFSSHVEELAKSVMKDPIRIVIGAK--------NAATDTIKQELLFTGT--EAGKRIALRQLIQKGLKPPVLIFVQSIDRAKELFHELVFDGINVEVIHSDRTKAQRDKIIDSFRVGKIWVLIATDLMARGLDFKGVNLVINYDFPQTVASYIHRIGRTGXXXXXGEAVTYYTQDDFPYMKSVVNVMKESGCDVPDWMLNMKNPTQKLKKELKRGIKRP 534          
BLAST of Ggra10218.t1 vs. uniprot
Match: A0A2P6TXM3 (RNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TXM3_CHLSO)

HSP 1 Score: 259 bits (663), Expect = 2.740e-75
Identity = 154/327 (47.09%), Postives = 207/327 (63.30%), Query Frame = 0
Query:   94 ALILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAAAEE--IRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRLGERVRRDEVK 418
            A++++PT+EL+ Q +RVL  LL    ++  V T  T A     K     V  ++A P RL A AEE  I  S    LVLDEAD+LFD  F  Q+D V+  C  RA  +    LFSAT+P  V  LA S++KD  R+TVG          + A   + QR +FVG   E+GK++A+R LI  G++PPVLVFV TK+RA +L REL+FDGV VD+IHAD++ AAR +AV  FR G  W+L+ATD++ RG+DFL V TVIN+D P S   Y+HR+GRTGR  + GHAIT FTE+D   + G+  V  A+G +VPDW+L+L +  R  + K
Sbjct:  300 AVVVSPTKELSVQTARVLKLLLPGLRIRCSVLTKATGAGTDFSK-----VDVLLAQPLRLGALAEEGRIDLSHVRMLVLDEADKLFDMGFTEQIDSVIAACKHRACVRA---LFSATLPEAVEGLARSVLKDPLRITVGER--------NTAAKTVKQRLLFVGR--EEGKLLALRQLIAEGLRPPVLVFVATKERAKELHRELLFDGVRVDSIHADQSTAARQAAVDNFRVGHTWMLVATDLIGRGMDFLGVNTVINFDCPRSTTDYIHRVGRTGRAXREGHAITCFTEDDAGQLRGIAHVIKAAGGEVPDWMLQLPKERRHRKAK 608          
BLAST of Ggra10218.t1 vs. uniprot
Match: A0A250XAM3 (RNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XAM3_9CHLO)

HSP 1 Score: 255 bits (651), Expect = 3.910e-75
Identity = 156/357 (43.70%), Postives = 223/357 (62.46%), Query Frame = 0
Query:   94 ALILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAAAEE--IRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRLGERVRRDEVKRLEKRPPK----RGRVGGPNRASLKHGGSK 444
            A++L+PT ELA Q +R L  LL    ++  + + +T A     K     V  ++A P RLL+  +E  I  S   YLVLDEAD+LF+  F+ Q+D V+  C      +    LFSAT+P  V ELA S+++   RVTVG          + A S ++QR +FVG   E GK+MA+R LI+ G+KPP LVFV +KDRA  L REL++DGVHVD+IH++++AAARA+AV  FR G+ W+LIATD++ RG+DF+ V+TV+NYD P S A Y+HRIGRTGR  + G A+T FTEED   +  V  +   +G +VPDW++++    +RD  K+  + PP+       +GG +   +K+  SK
Sbjct:  201 AVVLSPTHELAAQQARCLKLLLPGSGLRGCLLSKSTAAGSDFSK-----VDILLANPLRLLSLIKEGKIELSQARYLVLDEADKLFELGFMEQVDGVIAACTHTTIVRA---LFSATLPEKVEELARSVLQQPLRVTVGVR--------NSAASSVNQRLLFVGR--EAGKLMALRQLIKEGVKPPTLVFVGSKDRAKSLHRELMYDGVHVDSIHSEQSAAARAAAVDNFRLGRTWILIATDLIGRGMDFVGVKTVVNYDFPHSTADYIHRIGRTGRADQQGEAVTFFTEEDSGQLRSVANLVREAGGEVPDWMVQM----KRDRDKKRHRLPPQVTPSAHHIGGKHANKMKYKKSK 535          
BLAST of Ggra10218.t1 vs. uniprot
Match: A0A6S8LCF8 (RNA helicase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A6S8LCF8_DUNTE)

HSP 1 Score: 252 bits (643), Expect = 6.630e-74
Identity = 148/330 (44.85%), Postives = 216/330 (65.45%), Query Frame = 0
Query:   94 ALILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAAAEE--IRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRLGERVRRDEVKRLE 421
            A+IL+P+ EL  Q  RVL +LL   ++KA + T +T A     K     V  ++A P RL   A+E  I  S   +LVLDEAD+LF+  F+ Q+D VL  C  ++  +    LFSAT+P  V +LA +++ +  RVTVGA         + AV+ +DQR +FVG   E GK++A+R L+  G+KPPVLVFV TKDRA  L +EL++DGV  D++ A ++ AAR +AV  FR+G+ WVL++TD++ RG+DF+ V TVINYDMP++   Y+HRIGRTGR G +G A+T FTEED+ V+  V  +   SG +VPDW+ ++ ++VR  + K+++
Sbjct:  194 AVILSPSHELTAQQGRVLKQLLPGSNLKASILTRSTAAGTNFSK-----VDILLANPLRLATLADEGKIDLSHVRFLVLDEADKLFEMGFVEQIDAVLSACKHKSIVRA---LFSATLPEKVEDLARTVLVEPLRVTVGAR--------NTAVNTVDQRLLFVGR--ENGKLLALRQLLTEGLKPPVLVFVATKDRARALHKELMYDGVRADSLSASQSMAARTAAVDNFRSGRTWVLVSTDLIGRGMDFIGVNTVINYDMPATTTDYIHRIGRTGRAGHTGTAVTFFTEEDKPVLRPVANLIRESGGNVPDWMTKM-KKVRTKDRKKMK 504          
BLAST of Ggra10218.t1 vs. uniprot
Match: A0A8H7R7B7 (RNA helicase n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7R7B7_9FUNG)

HSP 1 Score: 252 bits (644), Expect = 1.030e-73
Identity = 143/317 (45.11%), Postives = 202/317 (63.72%), Query Frame = 0
Query:   94 ALILAPTRELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATPRRLLAAAE--EIRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKPRMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQRFVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGVHVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINYDMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGADVPDWLLRL 408
            ALI+APTREL +QI+R +  L Q   ++ +V T  T A       + +    +I TP RL+ A +  E+  SA  +LVLDEAD+L D+ FL Q D++   C   +  K    LFSAT    V ELA ++MK+  R+ +GA         + A   I Q  +F G   E GK++A+R L++ GIKPPVL+FVQ+ +RA +LF EL+FDG++V+ IH+DRT A R + + +FR GKIWVLIAT+++ARGLDF  V  VINYD P + A+Y+HRIGRTG   + G A+T +T++D + + GVV V   SG DVP+W+L +
Sbjct:  207 ALIIAPTRELVQQIAREVKHLSQGTKLRVNVLTKATAADKLQTPESRQKFDILITTPLRLVYAIKDKEVDLSAVRHLVLDEADKLLDQGFLEQTDEIFAACSGNSIQKS---LFSATFSSHVEELANTVMKNPIRIVIGAK--------NAATDTIKQELLFTGT--EAGKMIALRQLVQKGIKPPVLIFVQSIERAKELFHELIFDGINVEVIHSDRTKAQRDNIIDQFRVGKIWVLIATELMARGLDFKGVNLVINYDFPQTVASYIHRIGRTGXXXRQGEAVTYYTQDDLQYMKGVVNVMKESGCDVPEWMLNM 510          
The following BLAST results are available for this feature:
BLAST of Ggra10218.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILG71.850e-16155.69Putative ATP-dependent RNA helicase ddx52 n=1 Tax=... [more]
R7QFR31.370e-13247.34DEAD (Asp-Glu-Ala-Asp) box polypeptide n=1 Tax=Cho... [more]
A0A7S3A9B45.690e-9048.30Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A6T6PCA61.950e-7949.83Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
L1J3V12.050e-7946.59RNA helicase n=2 Tax=Guillardia theta TaxID=55529 ... [more]
I1BTN31.560e-7545.97RNA helicase n=1 Tax=Rhizopus delemar (strain RA 9... [more]
A0A2P6TXM32.740e-7547.09RNA helicase n=1 Tax=Chlorella sorokiniana TaxID=3... [more]
A0A250XAM33.910e-7543.70RNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=... [more]
A0A6S8LCF86.630e-7444.85RNA helicase n=1 Tax=Dunaliella tertiolecta TaxID=... [more]
A0A8H7R7B71.030e-7345.11RNA helicase n=1 Tax=Mucor saturninus TaxID=64648 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 456..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..486
NoneNo IPR availablePANTHERPTHR24031:SF594ATP-DEPENDENT RNA HELICASE DDX52-RELATEDcoord: 91..454
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 91..454
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 247..379
e-value: 5.90324E-39
score: 136.098
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 59..250
e-value: 8.3E-12
score: 55.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 76..227
score: 18.97821
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 286..370
e-value: 8.9E-29
score: 111.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 265..370
e-value: 5.4E-26
score: 91.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 268..409
score: 20.666904
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 87..215
e-value: 7.5E-20
score: 71.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 84..230
e-value: 4.5E-31
score: 110.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 237..411
e-value: 2.4E-47
score: 162.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 91..385
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 169..177
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 56..84
score: 8.570082

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:122220..123782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10218.t1Ggra10218.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 122220..123782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10218.t1 ID=Ggra10218.t1|Name=Ggra10218.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=487bp
MQHDPLRALLRGCSVPSASRASIRPPSSTTTPKSSHLDFFNQKRSANDSA
SPKLSSSFQKLVPNEKIQAALVKLEITSPTPVQQRQQRVKQPHALILAPT
RELAEQISRVLTRLLQLCHVKAHVRTLTTRASVAAWKAAPKAVHFIIATP
RRLLAAAEEIRFSAPSYLVLDEADELFDERFLPQLDQVLHVCGARAADKP
RMHLFSATIPPVVAELAASLMKDVKRVTVGASGFGGSFAVDEAVSHIDQR
FVFVGGRGEQGKVMAVRNLIRNGIKPPVLVFVQTKDRAADLFRELVFDGV
HVDAIHADRTAAARASAVARFRAGKIWVLIATDVLARGLDFLAVQTVINY
DMPSSGAAYVHRIGRTGRNGKSGHAITLFTEEDRKVVGGVVRVASASGAD
VPDWLLRLGERVRRDEVKRLEKRPPKRGRVGGPNRASLKHGGSKKRRTAP
RDEQHKSEADEEADEEADEEADEEADEEADDDGRAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif