Ggra10217.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra10217.t1
Unique Name	Ggra10217.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	436

Homology

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BLAST of Ggra10217.t1 vs. uniprot
Match: A0A2V3IWN9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWN9_9FLOR)

HSP 1 Score: 113 bits (282), Expect = 2.470e-24
Identity = 81/258 (31.40%), Postives = 123/258 (47.67%), Query Frame = 0

Query:  113 CGQEPSGEEYMRWEQPSWGSCMLLAVAQ--RAGIPMSNIEVVPHG-EVKSACHT-----AVVEFPPRFRSLSYEVGKRPRLDWGRAKQYLEREKV-------DSTLYAMQKDVFRAYK--VKTKEQKADKVNVLLYDRRDRRPYPLKRKWASAQALESRLRRDKRVSVTYVSELPKSLAAQAVLFHSADILVAPHGAAMANTVFMKRHSHVFEIWKCCKDEVREKPEEAHRWTGWHAGRMGLKLYYLQCHRPNEALSV 353
            CG++    +Y   ++P WG C+   +AQ   A +      + PH      ACH+      ++      R     V    +L W      ++   V       DS   +   ++  A     + K  ++D +NVL+YDR D R    +RKW  AQ +  +L  DKR+ V  + ++P S   Q  LF  ADI ++PHGAA+ANT+FM+  S V EI K C  + ++       WTGWHA  +GL L YL+C    +A +V
Sbjct:    2 CGEDA---DYASPQRPPWGICLAFILAQWHSAQLHFEKTRIWPHQVTAPGACHSKQIWMGILPASALSRDTGVRVSHFRKLSWFGRNCEVQYPCVSGLAHLPDSWQTSALSNIVSAVLDYTEVKYARSDVINVLIYDRNDTR----RRKWMGAQEVFEKLGSDKRLHVKLLHQMPMSFFKQVKLFAWADIFLSPHGAAIANTIFMQSESDVLEIMKNCDADSKQARFAPWDWTGWHAHLLGLNLVYLECTTLQQASAV 252

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BLAST of Ggra10217.t1 vs. uniprot
Match: A0A1X6P8T0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8T0_PORUM)

HSP 1 Score: 89.7 bits (221), Expect = 1.870e-15
Identity = 55/131 (41.98%), Postives = 72/131 (54.96%), Query Frame = 0

Query:  226 VNVLLYDRRDRRPYPLKRKWASAQALESRLRRDKRVSVTYVSEL-PKSLAAQAVLFHSADILVAPHGAAMANTVFMKRHSHVFEIWKCCKDE-VREKPEEAHRWTGWHAGRMGLKLYYLQCHRPNEALSVR 354
            V VLLY R D       R+W S  +L + LR ++ V+V  V  L P S AAQA  F +AD+LVAPHGAA AN +F+     V E+W+CC D  V  +P     W+G  A  +GL L Y+ C      L+ R
Sbjct:  647 VRVLLYTRGDM----TSRQWLSTGSLVAALRAERAVTVDVVHRLVPSSFAAQAATFAAADVLVAPHGAAAANALFLPPDGAVVEVWRCCWDAGVARRPTAPRPWSGALAAALGLDLIYVPCIEVRAPLARR 773

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BLAST of Ggra10217.t1 vs. uniprot
Match: A0A1X6PBV5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBV5_PORUM)

HSP 1 Score: 65.1 bits (157), Expect = 1.040e-7
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0

Query:  243 RKWASAQALESRLRRDKRVSVTYVSEL-PKSLAAQAVLFHSADILVAPHGAAMANTVFMKRHSHVFEIWKCCKD 315
            R+W     L + LR    V++T    L P S AAQA  F +AD++VAPHGAA+ N +FM     V E+W+CC D
Sbjct:  287 RQWVHTDTLVAALRALPGVALTVAERLTPSSFAAQAATFAAADVVVAPHGAAVVNALFMPPDGAVVEVWRCCWD 360

The following BLAST results are available for this feature:

BLAST of Ggra10217.t1 vs. uniprot

BLAST of Ggra10217.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2V3IWN9	2.470e-24	31.40	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A1X6P8T0	1.870e-15	41.98	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0A1X6PBV5	1.040e-7	44.59	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007657	Glycosyltransferase 61	PFAM	PF04577	Glyco_transf_61	coord: 202..306 e-value: 2.0E-12 score: 47.4
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 427..435
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..403
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 404..426
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	TMHMM	TMhelix		coord: 404..426

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000016_pilon	contig	tig00000016_pilon:119952..121259 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra10217.t1	Ggra10217.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000016_pilon 119952..121259 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra10217.t1 ID=Ggra10217.t1|Name=Ggra10217.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=436bp
MVRFWFGFPVILLILVQCSSSQARLDRCNFESRIRVSRRYTHADCNDPQA
NRSKSLLIDIPRIHGNPYHALYEVAWAVSYYLQNCLGRPHWQFGASNTFL
RIRVNFQMNLTRCGQEPSGEEYMRWEQPSWGSCMLLAVAQRAGIPMSNIE
VVPHGEVKSACHTAVVEFPPRFRSLSYEVGKRPRLDWGRAKQYLEREKVD
STLYAMQKDVFRAYKVKTKEQKADKVNVLLYDRRDRRPYPLKRKWASAQA
LESRLRRDKRVSVTYVSELPKSLAAQAVLFHSADILVAPHGAAMANTVFM
KRHSHVFEIWKCCKDEVREKPEEAHRWTGWHAGRMGLKLYYLQCHRPNEA
LSVRQLKRLSEQDGQHSDQWCGLPWVEVEMEHTYRQVRRAVAEQWKRKAL
RKPLVAADLSVGLELVGVAVVLTALFGRKASRRLR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007657	Glycosyltransferase_61