Ggra10213.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10213.t1
Unique NameGgra10213.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length224
Homology
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A2V3ILF4 (Protein disulfide-isomerase tigA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILF4_9FLOR)

HSP 1 Score: 261 bits (667), Expect = 1.500e-85
Identity = 136/213 (63.85%), Postives = 168/213 (78.87%), Query Frame = 0
Query:   13 LLLSSLLAAADAHSSS--TRVLELELLSLDHLITTSSKPLLLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTASGQKLTAINGPLSPYWRLVHLLFRFVHFLQVEFNQYRLNGGNVPLLLMAVMTGVLSAFVVVIYLITLPPKPLPSRSRWDVAATHDHHD 223
            LL++ L +   AH     + VLEL  L LDH+++T++KPLLLQFYSPTC HCVRFAPAYEQ+A  L ++A VARVDGI HRALRLRF VMAFPSFFLIHAGSVFEFVGS SS++L+ FV+S+G  SG+KL+++ GPLSPYW+LVHLLFRFV+FLQ   + Y+ NGGN+  L++AV+ GVLSAFVV+I+LIT PPKP P R+R        HHD
Sbjct:    7 LLVACLCSVVAAHPPQHHSAVLELSHLQLDHIVSTATKPLLLQFYSPTCIHCVRFAPAYEQLASDLTSDAFVARVDGINHRALRLRFHVMAFPSFFLIHAGSVFEFVGSASSEQLLNFVRSHGAISGKKLSSLAGPLSPYWKLVHLLFRFVYFLQRHVHMYQRNGGNMAFLVLAVVIGVLSAFVVIIHLITRPPKPYPQRTRL-------HHD 212          
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A485LKZ5 (Aste57867_20954 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKZ5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 6.220e-13
Identity = 39/118 (33.05%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   26 SSSTRVLELELLSLDHLITTSSKPL----LLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTASGQK 139
            ++++ V++L   S +HL   S+       L++FY+P C HC   AP +E++A  L  + NVA+VD  A+ AL  RF +  FP+    H G+++E+  +R+  +L+++ +  G  SG K
Sbjct:   16 AAASNVIDLTTDSFEHLTQASTGATTGDWLVEFYAPWCGHCKSLAPVFEEVADELKGDVNVAKVDVPANTALGQRFNIKGFPTILFFHKGAMYEYESTRTKGDLIEYARK-GYESGAK 132          
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A485LG90 (Aste57867_20959 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG90_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.800e-11
Identity = 37/123 (30.08%), Postives = 66/123 (53.66%), Query Frame = 0
Query:   13 LLLSSLLAAADAHSSSTRVLELELLSLDHLITTSSKPLLLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTA 135
            LL+   +AA+  HS +    +     +  L T+ +    + FYSP+C +    APA++ +A+++     + +VDG AHR L+LRFRV   P+F   H G ++ +   R++  + +F+ S   A
Sbjct:   13 LLVGGAVAASVVHSLTPETFD----DVTQLSTSGTGDWFVMFYSPSCPYYQDVAPAFDAVAKQVEGRVRLGKVDGKAHRELKLRFRVTRSPTFLFFHQGRMYAYKDERTTAAMAEFITSGFAA 131          
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A3M6VFL7 (Thioredoxin domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFL7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.290e-10
Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 0
Query:   51 LLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSN-GTASGQKLTAINGPLS-PYWRLVHLLFRFVHFLQVEFN 169
            L++FY+P C HC + AP YEQ+A  L    NVA+VD   +  L  RF +  FP+  L   G  ++F G R+ +E + F +      +G+ +TA  G L     +++H+   F+  L  + N
Sbjct:   48 LVEFYAPWCGHCKKLAPIYEQVADELKGQVNVAKVDVTDNAELGKRFGIRGFPTVLLFSHGKSYKFGGKRTLEEFLVFARGGFKNVAGEVVTASPGLLDFAIEQMLHVKSDFMTLLATKKN 168          
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A7J6QNY0 (Thioredoxin domain-containing protein (Fragment) n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QNY0_PEROL)

HSP 1 Score: 68.9 bits (167), Expect = 1.500e-10
Identity = 45/152 (29.61%), Postives = 72/152 (47.37%), Query Frame = 0
Query:   23 DAHS----SSTRVLELELLSLDHLITTSSK--PLLLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTASGQKLTAINGPLSPYWRLVHLLFRFVHFLQVEF 168
            +AH     S  R+L  E    D   +T S   P  + FY+P C HC +  P +E +A  ++   NVA VD  A+  +  RF +   P+ +LI+ G V+ + G R+ + L++F  S    + +    ++ P  P   L H   R    LQ +F
Sbjct:    5 EAHEFRQDSKLRILTDETFEHDTQASTGSTTGPWFVMFYAPWCGHCRKLLPTWEDLADEMYGQVNVAAVDVTANTEVGSRFTIKRLPTLYLINHGKVYRYAGQRTMEALIEFASSPEVYTAKAAETMDVPQPPSG-LKHAWARVEKLLQSKF 155          
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A7J6SER8 (Thioredoxin domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SER8_PEROL)

HSP 1 Score: 65.9 bits (159), Expect = 3.690e-10
Identity = 29/105 (27.62%), Postives = 55/105 (52.38%), Query Frame = 0
Query:   45 TSSKPLLLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTASGQKLTAINGPLSP 149
            +++ P  + FY+P C HC +  P +E +A  ++   NVA VD  A+  +  RF +   P+ ++I+ G V+ + G R+ + L +F  S    + +    ++ P  P
Sbjct:   20 STTGPWFVMFYAPWCGHCRKLLPTWEDLADEMYGQVNVAAVDVTANTEVGSRFTIKRLPTLYMINHGKVYRYAGQRTLEALTEFASSPEVYTAKAAETLDVPAPP 124          
BLAST of Ggra10213.t1 vs. uniprot
Match: C5KAH2 (Protein disulfide isomerase, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KAH2_PERM5)

HSP 1 Score: 67.4 bits (163), Expect = 6.450e-10
Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 0
Query:   22 ADAHS----SSTRVLELELLSLDHLITTSSK--PLLLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTASGQKLTAINGPLSP 149
            A+AH     S  R+L  E    D   +T S   P  + FY+P C HC R  P +E +A  ++   NVA VD  A+  +  RF +   P+ ++I+ G V+ + G R+ + L +F  S      Q    ++ P  P
Sbjct:   20 AEAHEFRQGSKLRILTDETFEHDTQASTGSTTGPWFVMFYAPWCGHCQRLLPTWEDLADEMYGQVNVAAVDITANTEVGSRFTIKRLPTLYMINDGKVYRYGGQRTLEALSEFASSPEVYIAQAAETMDVPQPP 153          
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A7S3HIB1 (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIB1_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.200e-9
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   27 SSTRVLELELLSLDHLITTSSKPL----LLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPS 104
            SS  V++L + + +HL   S+       L++FY+P C HC +  P YE++A+ LH   NVARVD  A+R L  RF V  FP+
Sbjct:   19 SSAEVVQLTVKNFEHLTQASTGATTGDWLIKFYAPWCGHCRKMEPTYERVAELLHGEVNVARVDVPANRELGTRFDVKGFPT 100          
BLAST of Ggra10213.t1 vs. uniprot
Match: A0A7J6TEC4 (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6TEC4_PEROL)

HSP 1 Score: 65.9 bits (159), Expect = 1.220e-9
Identity = 43/152 (28.29%), Postives = 72/152 (47.37%), Query Frame = 0
Query:   23 DAHS----SSTRVLELELLSLDHLITTSSK--PLLLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTASGQKLTAINGPLSPYWRLVHLLFRFVHFLQVEF 168
            +AH     S  R+L  E    D   +T S   P  + FY+P C HC +  P +E +A  ++   NVA VD  A+  +  RF +   P+ ++I+ G V+ + G R+ + L +F  S    + +    ++ P +P   L H   +    LQ +F
Sbjct:   24 EAHEFRQDSKLRILTDETFEHDTQASTGSTTGPWFVMFYAPWCGHCRKLLPTWEDLADEMYGQVNVAAVDVTANTEVGSRFTIKRLPTLYMINHGKVYRYAGQRTLEALTEFASSPEVYTAKAAETLDVP-APSSGLKHAWAQVEKLLQSKF 174          
BLAST of Ggra10213.t1 vs. uniprot
Match: M4BCW7 (Thioredoxin domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCW7_HYAAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.340e-9
Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 0
Query:   51 LLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVMAFPSFFLIHAGSVFEFVGSRSSDELVKFVQSN-GTASGQKLTAING 145
            L++FY+P C HC +  P YEQ+A  L    NVA+VD   H  L  RF +  FP+      G  ++F   R+ DEL+ F +       GQ + A  G
Sbjct:   52 LVEFYAPWCGHCKKLVPIYEQVADELKGEVNVAKVDVTEHPELGQRFGIRGFPTILHFSHGKSYKFGSQRTLDELLLFARGGFEQVDGQVVAAAPG 147          
The following BLAST results are available for this feature:
BLAST of Ggra10213.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILF41.500e-8563.85Protein disulfide-isomerase tigA n=1 Tax=Gracilari... [more]
A0A485LKZ56.220e-1333.05Aste57867_20954 protein n=1 Tax=Aphanomyces stella... [more]
A0A485LG908.800e-1130.08Aste57867_20959 protein n=1 Tax=Aphanomyces stella... [more]
A0A3M6VFL71.290e-1033.06Thioredoxin domain-containing protein n=1 Tax=Pero... [more]
A0A7J6QNY01.500e-1029.61Thioredoxin domain-containing protein (Fragment) n... [more]
A0A7J6SER83.690e-1027.62Thioredoxin domain-containing protein n=1 Tax=Perk... [more]
C5KAH26.450e-1030.60Protein disulfide isomerase, putative n=1 Tax=Perk... [more]
A0A7S3HIB11.200e-941.46Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7J6TEC41.220e-928.29Thioredoxin domain-containing protein (Fragment) n... [more]
M4BCW71.340e-936.46Thioredoxin domain-containing protein n=1 Tax=Hyal... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 20..141
e-value: 6.0E-23
score: 83.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..223
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..179
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..202
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 43..129
e-value: 3.6265E-22
score: 84.9697
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 39..130
e-value: 2.2E-16
score: 59.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 13..134
score: 11.482576
IPR044569Protein disulfide-isomerase A6-likePANTHERPTHR45815PROTEIN DISULFIDE-ISOMERASE A6coord: 11..132
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 28..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:107064..107824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10213.t1Ggra10213.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 107064..107824 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10213.t1 ID=Ggra10213.t1|Name=Ggra10213.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=224bp
MAAGRILLSVSLLLLSSLLAAADAHSSSTRVLELELLSLDHLITTSSKPL
LLQFYSPTCYHCVRFAPAYEQIAQRLHTNANVARVDGIAHRALRLRFRVM
AFPSFFLIHAGSVFEFVGSRSSDELVKFVQSNGTASGQKLTAINGPLSPY
WRLVHLLFRFVHFLQVEFNQYRLNGGNVPLLLMAVMTGVLSAFVVVIYLI
TLPPKPLPSRSRWDVAATHDHHD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR044569PDIA6-like
IPR036249Thioredoxin-like_sf