Ggra10207.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10207.t1
Unique NameGgra10207.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length193
Homology
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BLAST of Ggra10207.t1 vs. uniprot
Match: A0A2V3IP46 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP46_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 4.250e-33
Identity = 74/165 (44.85%), Postives = 91/165 (55.15%), Query Frame = 0 
Query:   32 CASDFASCGGSVPSPVGELPCCNAAFFCYTHGPYFSQCRPRGEQNA----------ERWYAGRALRGR-RAFLTPRQAARLALAPLRDERKXXXXXXXRDEPMRAVLPRLPRAERRQLVREVGAWRGVCRAALVRGELCVRACSRADTPRVARQLARLRVVAVVY 185
            CA+D+ASCGG VPSP+  +PCC+  FFCYT GPYFSQCRPR E+             RWY   +     R+FLT  QA+R    P+    K         E +RA LPRL R+ER QL+  V AW GVC   +  G L +  C       +ARQL+ L VVA VY
Sbjct:   33 CAADYASCGGGVPSPLSNMPCCSENFFCYTQGPYFSQCRPRKERMRTPAVTFTAPFSRWYRVHSRAAAFRSFLTAVQASRYGATPILAAEKIREIKPTTSE-LRATLPRLSRSERFQLLNHVSAWSGVCATHVQSGVLSISVCPNTLVDLIARQLSELHVVASVY 196
The following BLAST results are available for this feature:
BLAST of Ggra10207.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IP464.250e-3344.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:89353..89931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10207.t1Ggra10207.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 89353..89931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10207.t1 ID=Ggra10207.t1|Name=Ggra10207.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=193bp
MAPKRAAVATCALLALALWLLVAAPRGAAAACASDFASCGGSVPSPVGEL
PCCNAAFFCYTHGPYFSQCRPRGEQNAERWYAGRALRGRRAFLTPRQAAR
LALAPLRDERKLSAAPLRRDEPMRAVLPRLPRAERRQLVREVGAWRGVCR
AALVRGELCVRACSRADTPRVARQLARLRVVAVVYTPLSSSS*
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