Ggra10207.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra10207.t1
Unique NameGgra10207.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length193
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:89353..89931 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10207Ggra10207Gracilaria gracilis GNS1m malegenetig00000016_pilon 89353..89931 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10207.t1.stop1Ggra10207.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000016_pilon 89353..89355 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10207.t1.CDS1Ggra10207.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000016_pilon 89353..89931 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10207.t1.exon1Ggra10207.t1.exon1Gracilaria gracilis GNS1m maleexontig00000016_pilon 89353..89931 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10207.t1.start1Ggra10207.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000016_pilon 89929..89931 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra10207.t1Ggra10207.t1Gracilaria gracilis GNS1m malepolypeptidetig00000016_pilon 89353..89931 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra10207.t1 ID=Ggra10207.t1|Name=Ggra10207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=193bp
MAPKRAAVATCALLALALWLLVAAPRGAAAACASDFASCGGSVPSPVGEL
PCCNAAFFCYTHGPYFSQCRPRGEQNAERWYAGRALRGRRAFLTPRQAAR
LALAPLRDERKLSAAPLRRDEPMRAVLPRLPRAERRQLVREVGAWRGVCR
AALVRGELCVRACSRADTPRVARQLARLRVVAVVYTPLSSSS*
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spliced messenger RNA

>Ggra10207.t1 ID=Ggra10207.t1|Name=Ggra10207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=579bp|location=Sequence derived from alignment at tig00000016_pilon:89353..89931- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCCGAAGCGCGCCGCCGTCGCGACGTGCGCGCTGCTGGCGCTAGC
GCTGTGGCTTTTGGTAGCGGCGCCTCGCGGCGCGGCTGCCGCGTGCGCCT
CCGACTTTGCGTCGTGCGGCGGCAGCGTGCCCAGCCCGGTGGGCGAGCTG
CCGTGCTGCAACGCCGCCTTCTTCTGCTACACGCACGGCCCCTACTTCTC
GCAGTGCCGCCCGCGCGGCGAGCAGAACGCCGAGCGTTGGTACGCCGGCC
GCGCGCTGCGCGGCCGCCGCGCCTTCCTCACGCCGCGTCAGGCGGCGCGT
CTCGCGCTCGCGCCGCTGCGCGACGAGCGCAAGCTGAGCGCCGCGCCTTT
GCGCCGCGACGAGCCGATGCGCGCCGTGCTGCCAAGGCTGCCGCGCGCGG
AGAGGCGCCAGCTTGTGCGCGAGGTGGGCGCGTGGCGAGGCGTTTGTCGC
GCCGCGCTTGTGCGGGGGGAGCTTTGTGTGCGCGCGTGTTCGCGCGCAGA
CACGCCGCGCGTCGCGCGCCAGTTGGCGCGATTGCGCGTGGTGGCCGTCG
TCTACACGCCGCTGTCGTCGTCGAGTTGA
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protein sequence of Ggra10207.t1

>Ggra10207.t1 ID=Ggra10207.t1|Name=Ggra10207.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=193bp
MAPKRAAVATCALLALALWLLVAAPRGAAAACASDFASCGGSVPSPVGEL
PCCNAAFFCYTHGPYFSQCRPRGEQNAERWYAGRALRGRRAFLTPRQAAR
LALAPLRDERKLSAAPLRRDEPMRAVLPRLPRAERRQLVREVGAWRGVCR
AALVRGELCVRACSRADTPRVARQLARLRVVAVVYTPLSSSS*
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mRNA from alignment at tig00000016_pilon:89353..89931-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra10207.t1 ID=Ggra10207.t1|Name=Ggra10207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=579bp|location=Sequence derived from alignment at tig00000016_pilon:89353..89931- (Gracilaria gracilis GNS1m male)
ATGGCGCCGAAGCGCGCCGCCGTCGCGACGTGCGCGCTGCTGGCGCTAGC
GCTGTGGCTTTTGGTAGCGGCGCCTCGCGGCGCGGCTGCCGCGTGCGCCT
CCGACTTTGCGTCGTGCGGCGGCAGCGTGCCCAGCCCGGTGGGCGAGCTG
CCGTGCTGCAACGCCGCCTTCTTCTGCTACACGCACGGCCCCTACTTCTC
GCAGTGCCGCCCGCGCGGCGAGCAGAACGCCGAGCGTTGGTACGCCGGCC
GCGCGCTGCGCGGCCGCCGCGCCTTCCTCACGCCGCGTCAGGCGGCGCGT
CTCGCGCTCGCGCCGCTGCGCGACGAGCGCAAGCTGAGCGCCGCGCCTTT
GCGCCGCGACGAGCCGATGCGCGCCGTGCTGCCAAGGCTGCCGCGCGCGG
AGAGGCGCCAGCTTGTGCGCGAGGTGGGCGCGTGGCGAGGCGTTTGTCGC
GCCGCGCTTGTGCGGGGGGAGCTTTGTGTGCGCGCGTGTTCGCGCGCAGA
CACGCCGCGCGTCGCGCGCCAGTTGGCGCGATTGCGCGTGGTGGCCGTCG
TCTACACGCCGCTGTCGTCGTCGAGTTGA
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Coding sequence (CDS) from alignment at tig00000016_pilon:89353..89931-

>Ggra10207.t1 ID=Ggra10207.t1|Name=Ggra10207.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=579bp|location=Sequence derived from alignment at tig00000016_pilon:89353..89931- (Gracilaria gracilis GNS1m male)
ATGGCGCCGAAGCGCGCCGCCGTCGCGACGTGCGCGCTGCTGGCGCTAGC
GCTGTGGCTTTTGGTAGCGGCGCCTCGCGGCGCGGCTGCCGCGTGCGCCT
CCGACTTTGCGTCGTGCGGCGGCAGCGTGCCCAGCCCGGTGGGCGAGCTG
CCGTGCTGCAACGCCGCCTTCTTCTGCTACACGCACGGCCCCTACTTCTC
GCAGTGCCGCCCGCGCGGCGAGCAGAACGCCGAGCGTTGGTACGCCGGCC
GCGCGCTGCGCGGCCGCCGCGCCTTCCTCACGCCGCGTCAGGCGGCGCGT
CTCGCGCTCGCGCCGCTGCGCGACGAGCGCAAGCTGAGCGCCGCGCCTTT
GCGCCGCGACGAGCCGATGCGCGCCGTGCTGCCAAGGCTGCCGCGCGCGG
AGAGGCGCCAGCTTGTGCGCGAGGTGGGCGCGTGGCGAGGCGTTTGTCGC
GCCGCGCTTGTGCGGGGGGAGCTTTGTGTGCGCGCGTGTTCGCGCGCAGA
CACGCCGCGCGTCGCGCGCCAGTTGGCGCGATTGCGCGTGGTGGCCGTCG
TCTACACGCCGCTGTCGTCGTCGAGTTGA
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