Ggra10193.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10193.t1
Unique NameGgra10193.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length83
Homology
BLAST of Ggra10193.t1 vs. uniprot
Match: A0A2V3ILI1 (Diphthamide biosynthesis protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILI1_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 1.460e-40
Identity = 60/82 (73.17%), Postives = 69/82 (84.15%), Query Frame = 0
Query:    1 MPVYDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSDGDGDHDALRVRCLAEEH 82
            MPVYDDVDLEDMQWD  L+AYVYQCPCGDVFQITPAEL AG+EIARCPSC+LV+RVIYD D+L     +    R+RC+AE+H
Sbjct:    1 MPVYDDVDLEDMQWDATLLAYVYQCPCGDVFQITPAELAAGDEIARCPSCTLVIRVIYDPDDLPSDASELSLARIRCVAEQH 82          
BLAST of Ggra10193.t1 vs. uniprot
Match: C1EHZ8 (DPH-type MB domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EHZ8_MICCC)

HSP 1 Score: 103 bits (257), Expect = 2.620e-27
Identity = 42/62 (67.74%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    4 YDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSD 65
            YD++DLEDM W+  L A+ YQCPCGD+FQITP ELRAGEE+  CPSCSLV+ V+YD DEL +
Sbjct:    5 YDEIDLEDMDWNSELGAFTYQCPCGDLFQITPEELRAGEEVGHCPSCSLVITVVYDPDELKE 66          
BLAST of Ggra10193.t1 vs. uniprot
Match: A0A383VPL6 (DPH-type MB domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VPL6_TETOB)

HSP 1 Score: 100 bits (249), Expect = 4.100e-26
Identity = 42/64 (65.62%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    4 YDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSDGD 67
            YD+V++EDM+WD  L AY Y CPCGDVFQIT  +L+AGEEIARCPSCSL + VIYD D+  D +
Sbjct:    3 YDEVEIEDMKWDEQLQAYTYSCPCGDVFQITLEQLKAGEEIARCPSCSLYITVIYDQDDFLDAE 66          
BLAST of Ggra10193.t1 vs. uniprot
Match: A0A218XGB5 (diphthamide biosynthesis protein 3-like n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218XGB5_PUNGR)

HSP 1 Score: 100 bits (249), Expect = 4.210e-26
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 0
Query:    4 YDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSDGDGDHDALR 74
            YDDV++EDM+W+  L AY Y CPCGD+FQIT  ELR GEEIARCPSCSL + VIY+ ++ +DG   + +L+
Sbjct:    3 YDDVEIEDMEWNEELQAYTYPCPCGDLFQITKDELRLGEEIARCPSCSLYITVIYNAEDFADGSDKNKSLQ 73          
BLAST of Ggra10193.t1 vs. uniprot
Match: C1N688 (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N688_MICPC)

HSP 1 Score: 99.4 bits (246), Expect = 8.670e-26
Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    1 MPVYDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDEL 63
            M  YD+VDLEDM+W+  L A+ YQCPCGD+FQI+P ELRAGEEI  CPSCSLV+ V+Y+ ++L
Sbjct:    1 MSSYDEVDLEDMEWNAELGAFTYQCPCGDLFQISPEELRAGEEIGHCPSCSLVITVVYEPEDL 63          
BLAST of Ggra10193.t1 vs. uniprot
Match: diphthamide biosynthesis protein 3-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F7FF12 (diphthamide biosynthesis protein 3-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F7FF12)

HSP 1 Score: 99.4 bits (246), Expect = 1.170e-25
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    4 YDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSDGDGD 69
            YDDV++EDMQW+  L AY Y CPCGD+FQIT  +LR GEEIARCPSCSL + VIY+LD+    D +
Sbjct:    3 YDDVEIEDMQWNQELQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNLDDFIASDSN 68          
BLAST of Ggra10193.t1 vs. uniprot
Match: A0A2J7ZNU5 (Diphthamide biosynthesis protein 3 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZNU5_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 1.280e-25
Identity = 41/62 (66.13%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    4 YDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSD 65
            YD+V++EDM+WD  L AY Y CPCGD+FQIT  ELR+GEEIARCPSCSL + V+YD ++ SD
Sbjct:    3 YDEVEIEDMKWDEKLQAYTYTCPCGDLFQITLEELRSGEEIARCPSCSLYITVVYDPEDFSD 64          
BLAST of Ggra10193.t1 vs. uniprot
Match: A0A067LCR6 (DPH-type MB domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LCR6_JATCU)

HSP 1 Score: 99.4 bits (246), Expect = 1.280e-25
Identity = 40/62 (64.52%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    4 YDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSD 65
            YDDV++EDM+W+ GL AY Y CPCGD+FQIT  +LR GEEIARCPSCSL + VIY++++  D
Sbjct:    3 YDDVEIEDMEWNEGLQAYTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNIEDFLD 64          
BLAST of Ggra10193.t1 vs. uniprot
Match: A0A5J4YJD4 (DPH3-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJD4_PORPP)

HSP 1 Score: 100 bits (248), Expect = 2.800e-25
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    3 VYDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDELSDGDGD 69
            VYD+V++EDM+WD  L A+ Y CPCGDVF+IT  ELRAGEEI  CPSCSL +RVIYD DE      D
Sbjct:   61 VYDEVEIEDMEWDDALNAFTYPCPCGDVFRITKDELRAGEEIGTCPSCSLTIRVIYDQDEFEQVSPD 127          
BLAST of Ggra10193.t1 vs. uniprot
Match: A0A2N9EDR5 (DPH-type MB domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EDR5_FAGSY)

HSP 1 Score: 99.4 bits (246), Expect = 2.980e-25
Identity = 44/68 (64.71%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    4 YDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSCSLVVRVIYDLDE-LSDGDGDH 70
            YDDV++EDM+W+  L AY Y CPCGD+FQIT  ELR GEEIARCPSCSL + VIY+LD+ LSD + ++
Sbjct:   34 YDDVEIEDMEWNEELKAYTYPCPCGDLFQITKDELRIGEEIARCPSCSLYITVIYNLDDFLSDSNSNN 101          
The following BLAST results are available for this feature:
BLAST of Ggra10193.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILI11.460e-4073.17Diphthamide biosynthesis protein 3 n=1 Tax=Gracila... [more]
C1EHZ82.620e-2767.74DPH-type MB domain-containing protein n=1 Tax=Micr... [more]
A0A383VPL64.100e-2665.63DPH-type MB domain-containing protein n=1 Tax=Tetr... [more]
A0A218XGB54.210e-2659.15diphthamide biosynthesis protein 3-like n=1 Tax=Pu... [more]
C1N6888.670e-2665.08Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
diphthamide biosynthesis protein 3-like n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=UPI0018F7FF121.170e-2563.64diphthamide biosynthesis protein 3-like n=1 Tax=Tr... [more]
A0A2J7ZNU51.280e-2566.13Diphthamide biosynthesis protein 3 n=1 Tax=Tetraba... [more]
A0A067LCR61.280e-2564.52DPH-type MB domain-containing protein n=1 Tax=Jatr... [more]
A0A5J4YJD42.800e-2564.18DPH3-like n=1 Tax=Porphyridium purpureum TaxID=356... [more]
A0A2N9EDR52.980e-2564.71DPH-type MB domain-containing protein n=1 Tax=Fagu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007872DPH-type metal-binding domainPFAMPF05207zf-CSLcoord: 5..59
e-value: 4.9E-19
score: 67.8
IPR007872DPH-type metal-binding domainPROSITEPS51074DPH_MBcoord: 3..59
score: 21.266264
IPR036671DPH-type metal-binding domain superfamilyGENE3D3.10.660.10DPH Zinc fingercoord: 1..78
e-value: 1.2E-25
score: 90.8
IPR036671DPH-type metal-binding domain superfamilySUPERFAMILY144217CSL zinc fingercoord: 2..71
NoneNo IPR availablePANTHERPTHR21454:SF2DPH3 HOMOLOGcoord: 1..66
IPR044248Diphthamide biosynthesis protein 3/4-likePANTHERPTHR21454DPH3 HOMOLOG-RELATEDcoord: 1..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:59003..59395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10193.t1Ggra10193.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 59003..59395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10193.t1 ID=Ggra10193.t1|Name=Ggra10193.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=83bp
MPVYDDVDLEDMQWDGGLMAYVYQCPCGDVFQITPAELRAGEEIARCPSC
SLVVRVIYDLDELSDGDGDHDALRVRCLAEEH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007872DHP_MB_dom
IPR036671DHP_MB_sf
IPR044248DPH3/4-like