Ggra1013.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1013.t1
Unique NameGgra1013.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length599
Homology
BLAST of Ggra1013.t1 vs. uniprot
Match: A0A2V3J3A2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3A2_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 3.800e-48
Identity = 168/597 (28.14%), Postives = 281/597 (47.07%), Query Frame = 0
Query:    3 PSRQKSLE-KARALEEKVLLNNDVDAMIELARMLLEDDVSHHA----RARQMLERAVKQAQNPEAMYVLAVSLMEEEDESQQRRAFSLLERSLRIQEHSAVLLCMARCYSQGLGVKRDCKLMRQLCERSLRLKQDPYAMAFLASNLLLYPEMCSQTKRALQLFREAIRLSSDHELMNNLAVLYHEGRGNLRPCPKRXXXXXXXXXXXXXXXXXXXXXXCLLLEND-PSDKNVIQAIGMLEDALQCDHGKSEYIFISLADAYLEHGN--NAQRAFQLYEVAAIRFNSSEAQSRIINSLLDGTDAVFDDYARILQLFWQVYKTHDSFNALMT--FAEMLWTGAKRVPMNRKKAIEVLHSLQWNCHYCFSLMLRHDLSNYPRGKKRARTLLQQLDEKIDRCDFGGSECIVL-SESKCDSDKLLALQKLRAQTEKKRST-IAWLVPHLRVGRHILPFDGHPDWVTDVMRRFTLFKSIDSLNLASLVLEIEGEQQEAVTVL---EGLMSSDLRLIAMLNLSYILMNDVQGVTKEVTRGMKLLEDAVKETNEVSARAMLANALSRGPDSDAGDVERGWKLWQSVEEDVNDDEELRKVRRLISA 584
            PS + S E +ARA EE +   ND  A+++LA +LL D     A    R  Q+LERA+KQ  +  A+  L+      +  S                 +   L+ +A+  +       D +   Q+ +R  R  +    MA LA   L  P +    + AL+LF++AI++S+   LM  L  LY  G   L                            C L   +    +   +A  + E+AL  D    E   ++LAD Y+++      +R   LYE  A ++NS +A+  +I  L  G   +  D  R+L +  + Y++  +   L+T   A +LW+GA  +   RK A+++  + +W   Y  SLMLR+     P  +  A+   +Q+  K    D   S  I   S+ + D  + + +       + +  T   WL  +LR+ +   P+ GH    T  ++RF     I  LN+ASL+LE     + + T++   E LM ++L  +A LNLSY+L   V  V ++  R + LLE  V+E N++SAR +L + L+   +++  +++R   LW++VEE+ ++DEEL+K+ RL+SA
Sbjct:    2 PSTELSWEDEARAYEEAIKNGNDEYALVDLAVLLLTDKDDEPAPDRSRGIQLLERAIKQFASQGALVELSYQYRFSDSRSXXXXXXXXXXXXXXXXPNMVSLVGLAKALADPELPMYDLERAVQIFKRCSRNGRASLVMADLAELQLRQPSLRVDRRSALRLFKDAIKVSNSPSLMTKLGHLYSTGTALLPRSYDDMIKWYQRAIDDGKYSPAKYYLACALTSTEWDQPRKPFRASQLFEEAL--DQNPCEGYALALADLYVDYLELQKTERGILLYEATAKKYNSRKAKCALIYILAHGLFDIPIDCKRVLTIL-KPYRSSSARCRLITETVASVLWSGAIGIKPRRKFAVDIARTTRWPNDYTLSLMLRYGAPGLPVNRHAAKKRYRQVKNKA-AYDIAHSLFISEPSDPEYDPGRAIRIIPSIVTLDSEYVTAFGWLPLYLRMSKIRFPYHGHEQCFTYSVKRFAGLHDILILNMASLLLEEPSSSETSNTIICMFEDLMGTELHDVATLNLSYVLWKGVGVVPQDKARAIGLLEGLVEERNDISARVLLTSILAE--ETNENNIQRCLSLWRTVEEETDEDEELKKLSRLLSA 592          
BLAST of Ggra1013.t1 vs. uniprot
Match: A0A2V3IEM1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM1_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 1.150e-44
Identity = 164/592 (27.70%), Postives = 262/592 (44.26%), Query Frame = 0
Query:    8 SLEKARALEEKVLLNNDVDAMIELARMLLEDDVSH--------HARARQMLERAVKQAQNPEAMYVLAVSLMEEEDESQQRRAFSLLERSLRIQEHSAVLLCMARCYSQGLGVKRDCKLMRQLCERSLRLKQDPYAMAFLASNLLLYPEMCSQTKRALQLFREAIRLSSDHELMNNLAVLYHEGRGNLRPCPKRXXXXXXXXXXXXXXXXXXXXXXCLLLENDPSD-KNVIQAIGMLEDALQCDHGKSEYIFISLADAYLEHGN--NAQRAFQLYEVAAIRFNSSEAQSRIINSLLDGTDAVFDDYAR-ILQLFWQVYKTHDSFNALMTFAEMLWTGAKRVPMNRKKAIEVLHSLQWNCHYCFSLMLRHDLSNYPRGKKRARTLLQQLDEKIDRCDFGGSECIVLSESKCDSDKLLALQKLRAQTEKKRSTIAWLVPHLRVGRHILPFDGHPDWVTDVMRRFTLFKSIDSLNLASLVLEIEGEQQE----AVTVLEGLMSSDLRLIAMLNLSYILMNDVQGVTKEVTRGMKLLEDAVKETNEVSARAMLANALSRGPDSDAGDVERGWKLWQSVEEDVNDDEELRKVRRLIS 583
            +++ A+  E  +   NDVDAMI+L  MLL    S         H R  Q+LERAVKQA NP A  +LA+   +  ++ Q+RR  SLLE + R       L  +A+    G   ++D                                                   S++ ++M+ LA LYHEG  NL P  +                        LLLE    + ++  +A  +LEDAL   +  +E   I LA+ Y  H    N  RA  L E A   F S+ A   ++N    G      D+ R IL     +  T+     +M  A +LW+G+  V ++R++AI+V   ++ +    F+LMLR+D  + P  +K A +           C           + + DS +   + +L          + W+  ++R     LP+ G     T  + RF    +I SLNLASL+L+   +  E    A+T+LE LM ++LR IA +NL Y+L   V G+ ++  R +K+L   + ET +VSAR +LA+ L+   +    ++E       ++  +++D+EEL+K+ RL+S
Sbjct:    8 AVQLAKRYERAIKRFNDVDAMIQLGHMLLSGRHSSGAVGYKIDHCRGVQLLERAVKQADNPRAKALLALHFRDFGNKKQRRRVVSLLEDAFRQMGDPVSLHVLAKVLYDGDCGEKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNESDIMHRLARLYHEGTVNLEPSFENAVKWYQRSIDVGEHCDSKYYLARLLLETPVGEYRDPTRAALLLEDALTQSY--TERSLICLANVYTVHRQVANIPRAAYLLERAVCDFGSTAATVHLLNFCAFGFQGFPLDHQRAILICERHLSCTNPHRTVMMIMASILWSGSVSVRVDRERAIQVARQIENDHGIMFALMLRYDAPSRPADRKLAASYFTN----FRHCYVNALLTSEQEDPRFDSVQAEQMFRLARGNLLGTDYLGWIPLYIRKSTLGLPYHGDERCFTKNVMRFCSVANITSLNLASLLLDRTSKSPEQCAEAITILECLMETELRDIAAVNLCYVLWYGVGGIAQDQPRALKMLVRFIGETRDVSARVLLASTLAERANESNWNLESSSWTLSAIRAEISDEEELQKLARLLS 593          
BLAST of Ggra1013.t1 vs. uniprot
Match: A0A2V3ITQ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITQ7_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 4.190e-39
Identity = 159/577 (27.56%), Postives = 258/577 (44.71%), Query Frame = 0
Query:   28 MIELARMLL-EDDVSHHARARQMLERAVKQAQNPEAMYVLAVSLMEEEDESQQRRAFSLLERSLRIQEHSAVLLCMARCYSQGLGVKRDCKLMRQLCERSLRLKQDPYAMAFLASNLLLYPEMCSQTKRALQLFREAIRLSSDHELMNNLAVLYHEGRGNLRPCPKRXXXXXXXXXXXXXXXXXXXXXXCLLLE-NDPSDKNVIQAIGMLEDALQCDHGKSEYIFISLADAYLEHGN--NAQRAFQLYEVAAIRFNSSEAQSRIINSLLDGTDAVFDDYARILQLFWQVYKTHDSFNALMTFAEMLWTGAKRVPMNRKKAIEVLHSLQWNC---HYCFSLMLRHDLSNYPRGKKRARTLLQQLDEKIDRCDFGGS-ECIVLSES--KCDSDKLLALQKLRAQTEKKRSTI--AWLVPHLRVGRHILPFDGHPDWVTDVMRRFTLFKSIDSLNLASLVLEIEG----EQQEAVTVLEGLMSSDLRLIAMLNLSYILMNDVQGVTKEVTRGMKLLEDAVKETNEVSARAMLANALSRGPDSDAGDVERGWKLWQSVEEDVNDDEELRKVRRLISAGCEE 588
            MI LA +L+  +D     R  QMLERA+KQA +P AMY LA   ++    SQ  +A +LLERSL   E  AVL  ++   + GLGV+R+                                                          N L V++ +G  +  P  +R                       +L + +D    +  +A  +LE+ ++ + GK   I + LA+ Y    +  N  RA  L   A   FNS  A+  +   L  G + V    A  L LF + Y+      +++  +EMLW+G + +P + ++++ +   L       +Y  + MLR+     PR  K+A T+ ++  EK D   F      I+LSE     DSD   A++  RA +      +   WL   LR     LP  G+   +T+ ++R+     I  LNLASL++E       + +EAV +LE L+ + +  +A LNL Y+L N+V G+ ++  R   L E A +E N +  + +LANALS G D +  D ++  +LW+SVE+    + E+ ++  ++S   +E
Sbjct:    1 MIALANLLMYSEDYRDEERGIQMLERAIKQAGSPLAMYRLARYYLDFGSRSQYHKAVALLERSLHQSEDPAVLHLLSFAVASGLGVRRNIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALGVVFADGAPHFPPNARRAVKWFNRAIEVGNLPSAKHNLAVILTQTHDKVMPDPSRAALLLEEVVE-ETGKQGAI-LQLAELYSNWLSVLNYPRAVTLLTRAVHEFNSYPARFSLARMLAFG-EGVPAQRATALGLFERHYEKVHDIGSMLNLSEMLWSGTEELPADMERSVSLCKQLCRKTDIGNYVLASMLRYGAPTLPRNLKQAITICER--EKADDDHFIMLVHAILLSEDPESNDSDISHAIELFRALSVDTPLQMWWVWLPLSLRTSSVDLPIHGNEHCITESVKRYEEVNVIAKLNLASLLVEDRSPTLQDSEEAVQLLESLIDTRIGDLAALNLGYLLWNEVGGIPQDKERARALFERATEEDNNLVGKVLLANALSEGIDEEVSDADQVAELWRSVEDANKTNAEVSRLSSMLSDQAKE 572          
The following BLAST results are available for this feature:
BLAST of Ggra1013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3A23.800e-4828.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEM11.150e-4427.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITQ74.190e-3927.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 208..243
e-value: 170.0
score: 2.9
coord: 496..532
e-value: 35.0
score: 8.9
coord: 170..206
e-value: 27.0
score: 9.9
coord: 25..58
e-value: 80.0
score: 5.8
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 173..203
e-value: 1.1
score: 10.0
coord: 96..115
e-value: 5.3
score: 7.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 4..388
e-value: 7.4E-37
score: 128.9
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 131..348
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 131..348
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 154..321
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 5..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:463444..465240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1013.t1Ggra1013.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 463444..465240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1013.t1 ID=Ggra1013.t1|Name=Ggra1013.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=599bp
MDPSRQKSLEKARALEEKVLLNNDVDAMIELARMLLEDDVSHHARARQML
ERAVKQAQNPEAMYVLAVSLMEEEDESQQRRAFSLLERSLRIQEHSAVLL
CMARCYSQGLGVKRDCKLMRQLCERSLRLKQDPYAMAFLASNLLLYPEMC
SQTKRALQLFREAIRLSSDHELMNNLAVLYHEGRGNLRPCPKRASKWYLR
AIRASKQPLTMNNLACLLLENDPSDKNVIQAIGMLEDALQCDHGKSEYIF
ISLADAYLEHGNNAQRAFQLYEVAAIRFNSSEAQSRIINSLLDGTDAVFD
DYARILQLFWQVYKTHDSFNALMTFAEMLWTGAKRVPMNRKKAIEVLHSL
QWNCHYCFSLMLRHDLSNYPRGKKRARTLLQQLDEKIDRCDFGGSECIVL
SESKCDSDKLLALQKLRAQTEKKRSTIAWLVPHLRVGRHILPFDGHPDWV
TDVMRRFTLFKSIDSLNLASLVLEIEGEQQEAVTVLEGLMSSDLRLIAML
NLSYILMNDVQGVTKEVTRGMKLLEDAVKETNEVSARAMLANALSRGPDS
DAGDVERGWKLWQSVEEDVNDDEELRKVRRLISAGCEENWAARGFGKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf