Ggra10124.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10124.t1
Unique NameGgra10124.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length921
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10124.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 765..785
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..525
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 814..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 824..840
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 702..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 841..855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 728..749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 700..785
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 605..678
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 77..144
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 417..481
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 415..447
e-value: 20.0
score: 11.0
coord: 79..111
e-value: 190.0
score: 2.5
coord: 114..149
e-value: 84.0
score: 5.6
coord: 450..485
e-value: 29.0
score: 9.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 69..182
e-value: 3.5E-5
score: 25.0
coord: 405..505
e-value: 4.3E-6
score: 27.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000113_piloncontigtig00000113_pilon:246036..248921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10124.t1Ggra10124.t1Gracilaria gracilis GNS1m malemRNAtig00000113_pilon 246036..248921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10124.t1 ID=Ggra10124.t1|Name=Ggra10124.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=921bp
MAGTDFICVCCKATLQEGEAVRFIEECQHFCHVTCQPPARCPFDDQHLDL
HAASNAPSLPFSLECGSRFERLREKRSHAASCRNIAWILLHERNKSEKAL
LWLNKATKKTPPSANALLDLADWYERGFAVIRDTSHARDLRKKAQILLDD
LNERNEHFINNVEQGQVQSDQAQEDPVHENYQADDGHRVFSPLQDSKPRD
QQRSPQALHKLKDSPAQGLRRGALLDQASHANTAYPSEFSSGENINQNLL
THAHEPEGCESNSDASSAGDGHLHVEDGAFHPQNVDQSAPVSNSAATDSV
NHETYISCNITSPKRQLDQFTTADVTVPSEIDYEYNRTSPDFACVSCKSP
LNPGDSVFVLQECQHFRHATCSLSSKCPVDDQLLDLRAASKTAPVPFAFC
CGTRFERLMDTRLSGNSCRNIAWIFANEKVNSKKAVTWLNKAVKKSPLCL
TALIDLADRHETGDGVDQSLKEAKKLRKRAAPLLVELKQGNELFLKKESV
QDEPEMEVDPLPGTSPPLSNEKSGDVVNLNECSSRAETPEPQDIRDCIPS
VEEGHASLCRENPNDDCTAKDEAHPVKAVDANITPEKPVEVTLIVSTVAA
NEGISESEANQYKPDVSPRDDGFAPRTSVGKQQRMPYEGFDSPPSLSLLQ
NPKSSDREGVEWISHFTAGQGSDSAADPIKDASFSQRTPTWPMNEYRELS
ESFSSEQNEEHHFARPSTEEKPEEVSEPLNTTARTEMQSSWTFVRGRASQ
SGETIEDYECPLIPDRNNQANNSRPDISSSTDEKHVSPGVHLVAESRAGE
SPRLRTLGDLLKDARMTEDSPPSHSLRLAFSRSESEYAQDSNDYASDRHH
HSTGTASLVDESYSLPSGSARSDGARASASTTCVKFVLPAVRKFRGAFGR
IPEVGQETVSTLRLQNDCKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf