Ggra10082.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10082.t1
Unique NameGgra10082.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length495
Homology
BLAST of Ggra10082.t1 vs. uniprot
Match: A0A2V3IME3 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 224 bits (571), Expect = 1.610e-64
Identity = 131/316 (41.46%), Postives = 189/316 (59.81%), Query Frame = 0
Query:  180 STKPRLDAAKRELSSFVRQLDGSAHVGVAVFGGEDAFDETGMRILSPTKKNIQAAFDALENIPTFPDGPRTTLTALRSVQDFSQQLFPRQRRKIVVLIGDTPGREPGCSDQTDRIGVSRYLFPDDIIYTVYYGISVIPVSLGEPGLDAALPPIPSCSNRNAAEEPQPVAAGQASKIAEETKGEVVTSVSASGIFEAVDKVRRKALIIFQYAPGARISISTNSIKFPAYYYYYNN-VEPALSGCDDKLIVNMTGISSFVSEPAQITGKVKLELPAGICQSGPFRCKIRIKDSVQGQETLSHWVYPPTYYKDIDVRAC 494
            ST+P L A K ELSSFVRQL+GSA VGVAV+G E+++DE+G+ +LS     +  A +ALE+IP   DG RTT+TAL+++      L  R  ++I+VLIGD PGREP C     R G +R +        V    ++I VSLG  GL++ALP   +C N  +  +P P+A GQA  I   T GEVV  V+A+ +  AVD VRR+ +  +   PG+ I +S  S  FP Y   Y   V+   +GC +K+ +  +G+ +F+S PA++T  V + LP G+C  GPF C+IR+ +  +G E  S W  P  +++ I +  C
Sbjct:  126 STRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITALKTLSSSVAGLNLRGNKRIIVLIGDRPGREPDC-----RNGYNRDM--------VLPSSTMISVSLGSDGLNSALPAPSACMN-GSYYDPSPIAVGQARDIVNRTNGEVVEIVTAASLLWAVDTVRRRPVYWYNRPPGSNIRVS--SASFPLYRGPYTPPVQRYSNGCGNKVYLRTSGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIRRGGEYPSSWSIPFEHFEVIKIHGC 425          
BLAST of Ggra10082.t1 vs. uniprot
Match: A0A2V3IEV7 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 185 bits (470), Expect = 1.030e-50
Identity = 111/323 (34.37%), Postives = 179/323 (55.42%), Query Frame = 0
Query:  179 ESTKPRLDAAKRELSSFVRQLDGSAHVGVAVFGGEDAFDETGMRILSPTKKNIQAAFDALENIPTFPDGPRTTLTALRSVQDFSQQLFPR---QRRKIVVLIGDTPGREPGCSD--QTDRIGVSRYLFPDDIIYTVYYGISVIPVSLGEPGLDAALPPIPSCSNRNAAEEPQPVAAGQASKIAEETKGEVVTSVSASGIFEAVDKVRRKALIIFQYAPGARISISTNSIKFPAYYYYYNNVEPALS--GCDDKLIVNMTGISSFVSEPAQITGKVKLELPAGICQSGPFRCKIRIKDSVQGQETLSHWVYPPTYYKDIDVRAC 494
            +ST+ +L+  K +L SFVR L    +V VA +GGE    ETG  +      ++  A +AL+NIP   DGPRT++TA+ S+        P      R+I+VL+GDTPGREP C    ++DR+  S                 V+ V+L  PGL+AALP   +C    +A  P+    GQ +++A+ ++GE+++ V++S + E++ K+R  A     +  G+ IS+ + +  +  Y    +     ++  GCDD++I+  + I  F   P Q+TGK+ L LPAGICQ GPF C++ +K+ ++ + + SHW  P  +   I V+AC
Sbjct:   36 QSTRAKLNNVKEQLKSFVRTLGDVGNVSVAFYGGESDMGETGYSVALKATSDVNRAAEALDNIPIVADGPRTSITAMWSIMQHQDGTIPLGLFANRRIIVLVGDTPGREPECRHGIKSDRMSFSSQRT------------RVMVVNLASPGLNAALPAPAACGYITSAAIPE----GQGTRLADTSEGELISQVTSSKLRESILKLRMNAANGL-HGKGSHISVLSKTYTYTEYTCPSSFCARTITTKGCDDRVIIRKSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKERLE-RFSYSHWSLPQRHTHLIGVKAC 340          
BLAST of Ggra10082.t1 vs. uniprot
Match: A0A2V3IGI2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI2_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 3.270e-27
Identity = 98/293 (33.45%), Postives = 142/293 (48.46%), Query Frame = 0
Query:  180 STKPRLDAAKRELSSFVRQLDGSA-HVGVAVFGGEDAFDETGMRILSPTKKNIQAA---FDALENIPTFPDGPRTTLTALRSVQDFSQQLFPRQRRKIVVLIGDTPGREPGCS-DQTDRIGVSRYLFPDDIIYTVYYGISVIPVSLGEPGLDAALPPIPSCSNRNAAEEPQPVAAGQASKIAEETKGEVVTSVSASGIFEAVDKVRRKALIIFQYAPGARISISTNSIKFPAYYYYYNNVEPALSGCDDKLIVNMT-GISSFVSEPAQITGKVKLELPAGICQSGPFRCKIRI 466
            ST+ R+ A K ++ SF+RQL+  A ++ ++V G E++FD+ G  +L  T  N   A    D  E +P  PDGPR +L  L  +   +  +  R  ++IVVL+GDT GREP C  D+ DR       FP       +   SV+ VS+G+PGL+A LP    C+      E   V A QAS IA  T+G  V    A  + + V  V R A   F    G  IS+      F           P  S CD ++  N T G   F++ P + T ++ + L    C  GPF+C + +
Sbjct:  124 STRERIIALKPQIVSFIRQLEDVAENIHISVSGTEESFDQRGTSVLQRTTNNFAEAVQSLDEFERLPPIPDGPRASLRFL--LPSITNTVGFRSEQQIVVLVGDTSGREPTCVFDRFDRTS-----FPSRFSGGQF---SVVAVSIGDPGLNAPLPTQAPCTRFTPFVEA--VTANQASTIANLTQGAFVEGFDADTLLQTVMNVSRNAPGNFGQPTGFDISVPQPFSNFR---------RPFPSVCDGRVQFNSTMGNRFFLAGPLETTVQLSISLANSGCMDGPFQCPVTV 395          
BLAST of Ggra10082.t1 vs. uniprot
Match: A0A2V3IDQ9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDQ9_9FLOR)

HSP 1 Score: 92.4 bits (228), Expect = 1.530e-16
Identity = 81/284 (28.52%), Postives = 126/284 (44.37%), Query Frame = 0
Query:  202 SAHVGVAVFGGEDAFDETGMRIL--SPTKKNIQAAFDALENIPTFP--DGPRTTLTALRSVQDFSQQLFPR--QRRKIVVLIGDTPGREPGCSDQTDRIGVSRYLFPDDIIYTVYYGISVIPVSLGEPGLDAALPPIPSCSNRNAA----------EEPQPVAAGQASKIAEETKGEVVTSVSASGIFEAVDKVRRKALIIFQYAPGARISISTNSIKFPAYYYYYNNVEPALSGCDDKLIVNMTGISSFVSEPAQITGKVKLELPAGICQSGPFRCKIRIKDS 469
            SA + VAV+ GE +F   G   L       N+ A  +AL+ IP+      PRT L A+   + ++Q +  R    R+IVV+ GDTPGR+P C+        +R+      I+  +   ++I  S+G+PGLD AL  +P C    +           +E + VAAGQ S +   TKG ++T V AS +F A  +V          +PG R       +       Y    E     C +++++    +   V   +  T    + L    C  GPF C + I +S
Sbjct:  140 SAIIAVAVYAGEASFSRYGPPYLPLQSMTSNVSAVRNALQFIPSLQMKTVPRTLLNAIDKAR-YAQTIGWRGTNARRIVVVAGDTPGRDPTCTKSDYEPARTRFS-----IFNEFSETALIAASVGQPGLDGALAKLPQCPFSPSCSPVYCTPLPPDEGEQVAAGQLSALVNATKGLLLTGVDASALFRAALRVVN--------SPGRRFKAIDGVL-------YRLTAEYGYDTCGNRIVIQSPSLPLRVPALSVTTVDFSVALSENGCDGGPFVCHLGIGES 402          
The following BLAST results are available for this feature:
BLAST of Ggra10082.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IME31.610e-6441.46VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV71.030e-5034.37VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGI23.270e-2733.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IDQ91.530e-1628.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..57
NoneNo IPR availableCDDcd00198vWFAcoord: 181..340
e-value: 1.5949E-4
score: 40.2418
IPR002035von Willebrand factor, type APFAMPF13519VWA_2coord: 177..279
e-value: 6.0E-7
score: 30.1
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 170..381
e-value: 6.7E-10
score: 41.4
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 180..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000066_piloncontigtig00000066_pilon:70838..80749 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10082.t1Ggra10082.t1Gracilaria gracilis GNS1m malemRNAtig00000066_pilon 70838..80749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10082.t1 ID=Ggra10082.t1|Name=Ggra10082.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=495bp
MRVRHAEPPDELATTVQNAIDKLDVSVSAALDQVEVTAEDEENTAEDYDA
SEDGCSSEEGDFDATFFPCENTDGGNVQMTTTPVDTASNQDAPASSATED
TSLVAQAGTQGNEVSTIPPQQATRTLTRVRRSARIATQGNSRQPVAGDRI
EVYWPLDKQYDPGKVLRYGARSKKYSVRESTKPRLDAAKRELSSFVRQLD
GSAHVGVAVFGGEDAFDETGMRILSPTKKNIQAAFDALENIPTFPDGPRT
TLTALRSVQDFSQQLFPRQRRKIVVLIGDTPGREPGCSDQTDRIGVSRYL
FPDDIIYTVYYGISVIPVSLGEPGLDAALPPIPSCSNRNAAEEPQPVAAG
QASKIAEETKGEVVTSVSASGIFEAVDKVRRKALIIFQYAPGARISISTN
SIKFPAYYYYYNNVEPALSGCDDKLIVNMTGISSFVSEPAQITGKVKLEL
PAGICQSGPFRCKIRIKDSVQGQETLSHWVYPPTYYKDIDVRAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf