Ggra10066.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10066.t1
Unique NameGgra10066.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length328
Homology
BLAST of Ggra10066.t1 vs. uniprot
Match: A0A2V3IMC1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC1_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 3.220e-35
Identity = 100/342 (29.24%), Postives = 166/342 (48.54%), Query Frame = 0
Query:    1 MATITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSIRKHGTRIKLMAITSMLLFVIVEILASSNT----FTTFATESKLQRCNVTEPLLPGAYDATGAEIGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQERVQQSLGGDGIENCSDNGAICVFVRSEGRVLFLS--------EPYRNGSEPNE--FVATQMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRARRAVDDEVTAN-FLQCTENSDGHQIYLTE 327
            M TI L+    SLI+T +S I EV F++AL   N + +C  L + K + +R +  R K++A+ S LLF+ +EI+ S  +       F +E  +   NV     P   +   A+     C  +  +  Y+   N S  DG V C    A+ Y      +           S  G  CVFV  +    + S           R+G+   E  F+ T++ FD +  L  FA +A D+FL  V++  E+RRR+ +GS    C F  +  + T +P  LL   +  W+++++ F +C+  +R+VFFD+ NPLHWA + ++ VD+ V  +  + C    +   +Y++E
Sbjct:    1 MVTIALKAQYVSLIITIISFICEVIFIAALQTVNSIRECQLLKQKKQLRVRNYRHRAKIIALISALLFLGLEIIVSFFSDPVQLELFQSEPCVSVDNVLRLQGPQG-EFREADFIEGKCQTLRGNFNYVRVGNVSLSDGQVRCSKKAAYFYDIVSASETKKLPVSTAEVSCKGETCVFVFEQQNSTYFSGALLPDIVAELRSGAVDTEMAFLKTELLFDSSEMLPVFAGRAVDAFLEQVNDPFELRRRVFLGSAKKNCPFVEEVIDGTSVPRQLLYSLLFAWIVALLFFVLCLVLRRKVFFDVGNPLHWAIQVQKRVDEAVKHDPVVTCATEDEALALYVSE 341          
BLAST of Ggra10066.t1 vs. uniprot
Match: A0A2V3J5B4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5B4_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 1.240e-33
Identity = 104/347 (29.97%), Postives = 169/347 (48.70%), Query Frame = 0
Query:    3 TITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSIRKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRC--NVTEPL---LPGAYD----ATGAEIGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQERVQQSLGGDG-IENCSD----NGAICVFVRSEGRV-LFLSEPYRNGSE---PNEFVATQMSFDPAP-HLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRA--RRAVDDEVTAN-----FLQCTENSDGHQI 323
            TI LRPS+ SL++T  S++ E+  LSAL +FN + +C +L  G  VS+ +H  RIK++ I + L FV +E++ S+N+ T   TES L  C  +VT+     +  ++D      G +    SC+ V   + ++   N+S     V CG    F YV+ E+        G I +C      N   C  V  + +  L +SE +   S      EF  TQ+        L + A++    +   VS+E EVRRR++     + C F ++  E T I      +++ +W M +  F + +  +R VF+DM+N LHWA +   R+  DD  T       F++    +DG  +
Sbjct:    4 TIPLRPSVTSLVITITSLVVELACLSALFIFNAVCECRSLRNGNRVSVARHRLRIKILTILATLTFVGLEVITSANSHTKPVTESTLSPCIRSVTKQNFDNINSSFDDQTVTNGRDNIGISCVNVGGGEVFVKNGNYSLDTLDVQCGAKPIFSYVSAEKEFLPPASPGVITHCEQDEFLNMGTCASVSLQNKTRLLISERFSEESNFEIDAEFRPTQLFMTIGEDQLESIAKQLLTLYTIGVSDEAEVRRRILTDGIRSQCSFDAETHEFTEIKLWAFILTVIIWAMCITFFLVMLFVRRGVFYDMSNALHWAEKTVYRQLEDDTGTEKGQVRMFVELKGKTDGRTL 350          
BLAST of Ggra10066.t1 vs. uniprot
Match: A0A2V3J6F3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F3_9FLOR)

HSP 1 Score: 132 bits (331), Expect = 3.790e-32
Identity = 85/321 (26.48%), Postives = 151/321 (47.04%), Query Frame = 0
Query:    1 MATITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSIRKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPLLPGAYDATG---AEIGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQERVQQSLGGD---GIENCSDNGAICVFVRSEGRVLFLSEPYRNGS-----EPNEFVATQMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRARRAVDDEVTAN 310
            M  I L+    S+IVT +S +AE+  LS L V N LH+C  L RG+SV +R+H  R +L+++  +  F  +E++ S         + ++  C      +  + D+T    A      C +++N     F  N S+    V C     + +   +   + +  D   G  +  + GA CVFV+  G +  +S P+         +    + T++ F P  ++  FA +AT++FL ++     +RR +  G+    C F       T +P  ++     VW +++ +F      +R VFF +++P+HWA R+ RA DD +  N
Sbjct:    1 MVLIRLKAPFVSVIVTVLSTLAELALLSFLFVLNNLHECKQLQRGRSVQVRQHLRRTRLLSVVCLGAFFALEVVFSFYNDPVNNVQIEIHECITASNSVKDSGDSTQFLRASDILVECRRLDNGTITQFGGNFSSRTQQVECSTEAMYTHPLGDETSEEIVADVPFGCVSGGEEGAACVFVQQRGNLSLISAPFFLDELSILPDTLPHIITELHFTPPSNVSLFATRATNAFLQNIQGPSALRRIIYSGASEDQCAFPVVRGSATTVPLAMIVALAAVWAVALAMFASVFALRRGVFFKLDDPMHWATRSVRAADDPLGDN 321          
BLAST of Ggra10066.t1 vs. uniprot
Match: A0A2V3IUG0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG0_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 9.220e-25
Identity = 91/307 (29.64%), Postives = 154/307 (50.16%), Query Frame = 0
Query:    8 PSIFS-LIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSIRKHGTRIKLMAITSMLLFVIVEILASSNTFT---TFATESKLQRC---NVTEPLLP---GAYDATGAEIGFFSCLQVNNSDFYIFPSNHSTPD-GTVACGDSYAFRYVNQ--ERVQQSLGGDGIENCSDNGAICVFVRSEGRVLFLSEPYRNGS---EPNEFVA--TQMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWA 296
            P++++ L+ T ++ I E+G +SA  V  GL +C  L+  + V +  H    +++ + +M+ F+ +E+L S  TFT   T   ESK Q C   N TE  L            E+  +SCL+ N+S+     +   + D G V C   + F+Y N   +  Q S   +  + C++     V +   G  +FLS+P    S   + N+     T ++F+    ++  A K    +   V +EL+VRRR+++ S+   C+F+S   EH+ +P  LL + I +W     LF +    KR VF+D++NP HWA
Sbjct:   21 PTLYTQLMFTAINAITEIGCVSATFVLIGLAECYALTTHRRVRLASHRRYHRVVQVVAMITFIALEVLIS--TFTKPHTHHIESK-QNCTQVNRTENFLALNDSDERRMSEEMVLYSCLRTNSSNIINISTGVKSEDTGAVQCNQEWIFQYENDRTDHEQFSERDEVGKQCNEQFCTLVSLDRSGTRMFLSKPVPRASFDSDNNKIDGKWTNLNFNVQIDVKIMATKVLGLYEQGVFDELDVRRRLLVQSKKQECQFSSDRKEHSVLPFWLLGLIISMWGTCAFLFILTRVLKRGVFYDIDNPSHWA 324          
BLAST of Ggra10066.t1 vs. uniprot
Match: A0A2V3IT05 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 9.650e-24
Identity = 90/349 (25.79%), Postives = 158/349 (45.27%), Query Frame = 0
Query:    1 MATITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSIRKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPL-LPGAY--DATGAEIGFFSCLQVNNSDFYIFPSNHSTPDGT---VACGDSYAFRYVNQERVQQSL------GG---DGIENC----------SDNGAICVFVR-----SEGRV-LFLSEPYRN---GSEPNE-----FVATQMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRARRAVDDEVTAN 310
            M  I L+    SLIVT +S +AE+    AL+ FN   +C  L +G+ VS+R H  R K +A+ +M++F+ +E++ S  +      + +   C   + + L   +  D    +     C+ +    F     N S    T   V CG    + Y N++ +Q +L      GG   D +  C               +C  VR     S G   ++LS   R    G   N+     F+ T + ++ +   R FA +   ++   V++ +E+R+R+ MG     C F  +  + T +P  L+   +  W++S + F   +  +R +F+DM++PLHWA R  R +D+ +  N
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDEDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNEDDLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTNVYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFLTFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVGN 349          
BLAST of Ggra10066.t1 vs. uniprot
Match: A0A2V3J5C2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 101 bits (251), Expect = 1.380e-20
Identity = 96/348 (27.59%), Postives = 151/348 (43.39%), Query Frame = 0
Query:    1 MATITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSIRKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPLL--PGAYD-ATGAEIGFFSCLQVNNSDFYIFPSNHST-----------PDGTVACGDSYAFRYVNQERV-QQSLGGDGIENCSDNGAICVFV-RSEGRVLFLSEPYRNGSEP--NEFVA-----TQMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRARRAVDDEVTANFLQCTENSDGHQIYL 325
            M  I L+    SLIVT +S IAE+  LSA++VFN   +C  L  G  V++R H  R K + + + L FV +E+ +S  +     TE   + C   + L    G  + +T   +    C+ +N++ F+    N S             D    C         N ER   + +  + +  C   G  CVFV RS   V F    +        NE +      T +S++       FA +A D     V++   +RR +  GS  T C F +  S+ TR+    +   +  W +S+  F      +RR+F+DM++PLHWA +  R  D   T N +  T   +G +  L
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVLYTANVERAPDEPVPDEYVVGCV--GTSCVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTTISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNFKT-FSDATRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDNDLSDTDNPVVTTVYENGSRALL 345          
BLAST of Ggra10066.t1 vs. uniprot
Match: A0A2V3IK81 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK81_9FLOR)

HSP 1 Score: 86.7 bits (213), Expect = 2.570e-15
Identity = 84/336 (25.00%), Postives = 138/336 (41.07%), Query Frame = 0
Query:    4 ITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSIRKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRC------NVTEPLLPGAYDATGAEIGFFSCLQVN-NSDFYIFPSNHSTPDGTVACGDSYAFRYVNQERVQQSLGGDGIENCSDNGAICV---FVRSEGRVLFLSEPYRNGSEPNEFVA-------TQMSFDP-APHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQGSEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRARRAVDDEVTANFLQCTENSDGH 321
            I LRP    LI T +  ++E+ F SA++V + L +C  L +GK++S++ +G RI+++ + ++L+FV +E+L S  T  T    +  Q C      NV+             E  FF CL+   N    +   ++S   G V C +     Y +     +   G  +E    +   C    F +           + +     E          T +SF P A  L    +     +   +S E E+RR +    R   C   +    HT +P  +L ++  +  +S+V F      K  VFFDM +P HW+ +A         A  L  TE    H
Sbjct:   17 IPLRPLTTQLIFTVIMAVSEIVFASAVLVLHALAECHVLKKGKALSVKSNGHRIRVINVLALLMFVGLEVLLSVYTVGTDTAVNSEQNCVRLFRRNVSGTEFDILDKWANHESIFFGCLRPGLNQTISVSGGSYSLDSGWVQCNEGTLLSYRHFAVSTEMFTGRELEQKKCDEIRCAGMFFEQGSXXXXXXXXXFSHSLNVTETFQGTVAGRRTNLSFTPSAAELEVMTDMLLTLYRMGISNEHELRRVVFSLVREQRCSMITFLRRHTVLPVWMLTLTALLCALSMVAFAAAQLGKGWVFFDMRDPAHWSRKASSPHARGGIATELDTTELDAAH 352          
The following BLAST results are available for this feature:
BLAST of Ggra10066.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IMC13.220e-3529.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5B41.240e-3329.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6F33.790e-3226.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUG09.220e-2529.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT059.650e-2425.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C21.380e-2027.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK812.570e-1525.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 282..327
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:164848..165831 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10066.t1Ggra10066.t1Gracilaria gracilis GNS1m malemRNAtig00000862_pilon 164848..165831 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10066.t1 ID=Ggra10066.t1|Name=Ggra10066.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=328bp
MATITLRPSIFSLIVTFVSVIAEVGFLSALIVFNGLHQCSNLSRGKSVSI
RKHGTRIKLMAITSMLLFVIVEILASSNTFTTFATESKLQRCNVTEPLLP
GAYDATGAEIGFFSCLQVNNSDFYIFPSNHSTPDGTVACGDSYAFRYVNQ
ERVQQSLGGDGIENCSDNGAICVFVRSEGRVLFLSEPYRNGSEPNEFVAT
QMSFDPAPHLRTFAEKATDSFLHSVSEELEVRRRMIMGSRNTTCRFTSQG
SEHTRIPTPLLAVSICVWVMSVVLFFICVPFKRRVFFDMNNPLHWANRAR
RAVDDEVTANFLQCTENSDGHQIYLTE*
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