Ggra10065.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10065.t1
Unique NameGgra10065.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10065.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldGENE3D2.40.50.120coord: 20..175
e-value: 4.9E-7
score: 31.6
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 20..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:152262..152894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10065.t1Ggra10065.t1Gracilaria gracilis GNS1m malemRNAtig00000862_pilon 152262..152894 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10065.t1 ID=Ggra10065.t1|Name=Ggra10065.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MKLFFTTVALISLCNVASACSCIYQSLQDVFYSDGIDWVIKGTVISSTRI
PFKQPSVRTLTAPLSRQQDGLLSAPATTASPPAFGFGIAFPIGPTRVEHQ
VRVEQVFKGCDVPEVIKVFTLSGTSCSLQLFTGVTYLLTLARDTGMGSGV
FQCAYNRRFESVSGHVNFLERAGNCCGDDCPTPSPRPFPGSIGIAGLARS
ASRTSSWYVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold