Ggra1006.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1006.t1
Unique NameGgra1006.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length99
Homology
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BLAST of Ggra1006.t1 vs. uniprot
Match: A0A2V3IQ92 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ92_9FLOR)

HSP 1 Score: 81.3 bits (199), Expect = 7.190e-16
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0 
Query:    2 AVNETRRLQVDRELVGLRIKGETTKLVDEALKEYTCGDSNTSQNVETMTVLIPCLVFVVPPLVLSILVLTFW 73
            AV+E RR+QVDRELVGLRI G++ KLVD  L EYTC + N    +    +LIPCL+FV+PPL  S+LVL  W
Sbjct:  430 AVSEERRMQVDRELVGLRIDGQSRKLVDSYLDEYTC-EENIVLTIGPTIILIPCLIFVLPPLACSVLVLVLW 500
The following BLAST results are available for this feature:
BLAST of Ggra1006.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ927.190e-1658.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 51..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:145792..146088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1006.t1Ggra1006.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 145792..146088 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1006.t1 ID=Ggra1006.t1|Name=Ggra1006.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=99bp
MAVNETRRLQVDRELVGLRIKGETTKLVDEALKEYTCGDSNTSQNVETMT
VLIPCLVFVVPPLVLSILVLTFWDYCISHKKKWHVSKAALGATRPQIP*
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