Ggra10059.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10059.t1
Unique NameGgra10059.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length371
Homology
BLAST of Ggra10059.t1 vs. uniprot
Match: A0A2V3IQU1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQU1_9FLOR)

HSP 1 Score: 205 bits (522), Expect = 1.470e-58
Identity = 102/212 (48.11%), Postives = 140/212 (66.04%), Query Frame = 0
Query:   87 YWQLHGVTNSRSQAFPIWSHTGSTCGA-SIKDFVEDQRVATGDCNGGRLCRARMVVSKQGTGAIIQVGYNIFYNRGVIAVNSRTKQRVKAVTRAEANNWAKALLKKIGPSVEAVNCKVTVSMISDALMQSKNDAARCPRTDDPLCTQLKTVNSCKVFEYSSETEQEKECREFVESGVSISDFEDLEVKSPCAGVKGDANIVYMTVPLCTTTC 297
            Y + +GV  + S   P  +   S+CG  +++DFV ++R++TGDCNGGRLCRAR++VSK+G    I+ GY IF N+GV  +N  T++ VK VTR EA  WA+ LL KI   ++ V C VT  MI+D +M +K+DAA CPRTD PLC++L  + +C + E S ETEQEK+C EF+ES   ++ FE+L   SPC  V    N + M  P CTTTC
Sbjct:  125 YSKAYGVAKTSSSFLPPVTRADSSCGTGTVEDFVVEKRISTGDCNGGRLCRARVIVSKEGNQVTIKSGYYIFRNKGVTPLNPYTRRNVKKVTRREATIWAQNLLSKIQSDLDKVQCPVTADMIADGIMNTKDDAASCPRTDHPLCSRLFLLKTCTIAEPSGETEQEKKCVEFLESSSPVATFEELSRTSPCEDVSFLYNRIGMKAPFCTTTC 336          
BLAST of Ggra10059.t1 vs. uniprot
Match: A0A2V3IP66 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR)

HSP 1 Score: 198 bits (503), Expect = 1.950e-54
Identity = 120/305 (39.34%), Postives = 172/305 (56.39%), Query Frame = 0
Query:   16 SRVPRGAIILTVLVASVVVFFSNRT----PVALNHSNGFHGLPNPSR--SLLER-ITSLSLPW-NTRDLRRMPNPSQNRYWQLHGVTNSRSQAFPIWSHTGSTCGASIKDFVEDQRVATGDCNGGRLCRARMVVSKQGTGAIIQVGYNIFYNRGVIAVNSRTKQRVKAVTRAEANNWAKALLKKIGPSVEAVNCKVTVSMISDALMQSKNDAARCPRTDDPLCTQLKTVNSCKVFEYSSETEQEKECREFVESGVSISDFEDLEVKSPCAG--VKGDANIVYMTVPLCTTTCAASACEFWEGKFF 310
            SR+ R  + L V V S+V+F   R     P     SNG H +P+P+    LL++  T     W   +  R   N + +    L     S S+   I +    +CG  I D + D+R+ T DC  GR+CRAR+V++K+     I+ GYNIF  R  I V+  TK+RVKA TR EA  WA  LL KI   ++ + C V VSMI+DA+M+SK+D  RCPRTD PLCT L+T+ +C V +   ETE+++ C+EF+++G +    + L   SPCAG   + D+  + ++VP CTTTC  S+C   E   F
Sbjct:   28 SRLSRAGLFLVVAVVSLVLFAVKRVGVHHPFIYGESNGLHSIPSPTNRFGLLDKWTTDRPTRWLGMKSSRISSNFAASSRAGLSTWFGSHSRQDSIATGPDDSCG--IGDVMLDERIGTRDCAVGRICRARLVLNKEEGEVTIRAGYNIFPKRKDIGVDRTTKRRVKATTRKEATKWATVLLSKIQEDMKELGCDVNVSMIADAIMKSKDDVVRCPRTDSPLCTPLETIKTCTVLDERFETEEQRACQEFMKTGTTDISLDYLSTGSPCAGNFQQWDSPCLSVSVPFCTTTCQNSSCPKQERVMF 330          
BLAST of Ggra10059.t1 vs. uniprot
Match: A0A2V3ITP9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITP9_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 3.960e-30
Identity = 91/284 (32.04%), Postives = 138/284 (48.59%), Query Frame = 0
Query:   45 NHSNGFHGLPNPSRSLLERITS---------------LSLP-WNTRDLRRMPNPSQNR------YWQLHGVTNSRSQAFPIWS--------HTGSTCGASIKDFVEDQRVATGDCNGGRLCRARMVVSKQGTGAIIQVGYNIFYNRG-VIAVNSRTKQRVKAVTRAEANNWAKALLKKIGPSVEAVNCKVTVSMISDALMQSKNDAARCPRTDDPLCTQLKTVNSCKVFEYSSETEQEKECREFVESGVSISDFEDLEVKSPCAGVKGDANIVYMTVPLCTTTC 297
            N +NG    P+  R LL  +T                L LP ++  + R +P  S +R      +  +H    S  + F  W         H+         D V  + V T DC+ G  CRAR+VV+K   G  +Q GY I+  R   + + ++TK+RVKAVT  EA  WA+ LL+++G  +  V+C V+VSMI+DA+M++K+  A C  TDD LC++L T+  C       E+  E+ C  F+ S   +  F DL+    C   K   N + + +P C+ TC
Sbjct:   30 NQANGRFSFPSVGRKLLSLLTIAAALVAVIFLVNNYVLELPRFSYHESRLVPRLSTSRNSNPFHFDAVHSHLYS-DRKFSHWKARSSVSLLHSAIRSNICEVDSVTQEAVPTRDCSVGLWCRARLVVTKNDAGITVQAGYYIYTKRSKTMPITAQTKKRVKAVTPNEATKWAETLLEQLGTKLGEVDCNVSVSMIADAIMETKDVVASCSNTDDSLCSELVTLRECSC---QVESVIEQSCYGFLTSDAQVGSFADLQ--GGCPEAKFMYNRIGVPLPYCSFTC 307          
The following BLAST results are available for this feature:
BLAST of Ggra10059.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IQU11.470e-5848.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP661.950e-5439.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ITP93.960e-3032.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..370
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000862_piloncontigtig00000862_pilon:36058..37358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10059.t1Ggra10059.t1Gracilaria gracilis GNS1m malemRNAtig00000862_pilon 36058..37358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10059.t1 ID=Ggra10059.t1|Name=Ggra10059.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=371bp
MQGFHDLRRVLPMFTSRVPRGAIILTVLVASVVVFFSNRTPVALNHSNGF
HGLPNPSRSLLERITSLSLPWNTRDLRRMPNPSQNRYWQLHGVTNSRSQA
FPIWSHTGSTCGASIKDFVEDQRVATGDCNGGRLCRARMVVSKQGTGAII
QVGYNIFYNRGVIAVNSRTKQRVKAVTRAEANNWAKALLKKIGPSVEAVN
CKVTVSMISDALMQSKNDAARCPRTDDPLCTQLKTVNSCKVFEYSSETEQ
EKECREFVESGVSISDFEDLEVKSPCAGVKGDANIVYMTVPLCTTTCAAS
ACEFWEGKFFDFAVEYLVAYRTAHEEYPYIIPKHLQDIAAENYGGFIYDL
RYELLELPADHIESQCSLVG*
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