Ggra10036.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10036.t1
Unique NameGgra10036.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length900
Homology
BLAST of Ggra10036.t1 vs. uniprot
Match: A0A2V3IHG1 (Exosome component 10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG1_9FLOR)

HSP 1 Score: 859 bits (2220), Expect = 8.820e-300
Identity = 504/936 (53.85%), Postives = 622/936 (66.45%), Query Frame = 0
Query:    1 MDGSNSKQVCAEVLKALERAIRYSQPLPRRDELQLIRVTSPELKEQGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLPLRDSMFDQTAETTDEALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPFVAPYAKDH-------YSDPATPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKGLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAKIDGATDDRCGGVGHSEELPVQTEDDLKEKSVSIKARRVAEGQHKGFVGSSSQSSVVPKTGASLT-SLGTSEIYKLTKKQIVCKKETKLFSGGPKLKVTGTSKSALLDSDPDS------------------DSVDHVECSNAEHSDQSIAPNGRK---GVEYTHTGELHLKDVYECEGQGSKAVRKVGSPECINETDECR--EGKGKGEVESLQPFQGISEEAMDK---HSVEDKIASAKAEIAKDQAQRQASLNFCVDTDGIERKDYKKKITRDVQSVEERTDM-TEEVISLREEAKRAEISGSKKRXXXXXXXXXXXXXXXXXAFDYENAISREEQKRAT---RRPDQYDPMWKLRGEREPDVKRRVKKRRRGRGRSMSFKA 898
            M  + S+Q C ++LKALE+A+R SQ LP RDELQLIRVTSP LK+  N+L  Q+LSEIKS+ASRYAV I SSD+DS SS S+ S+  RDS+FD   ETTDEALQHFN ALD AR I NAVVPPQGAL P  S  ++G  NLGRS+G  LD+EKPQ+HFPDYPIDNS APF+ PY+ +H         +   PH++ R     +V+TYL+ELYK NSN +  QRHPYE EI+S+ QEM+ K F +E+  V+K M+ TPC FV++EEELFN+ ERLKK +AIAVDIENHSVRSFQGFTCLIQISTR ED +ID L+LRG+IHRALAPIFTDET VKVLHGAD+DVQWLERDFG+YVVNMFDTGQA+RLLKLPSASLAFLL+HFCDV   SKKKFQLADWRQRP+P +MF YARSDTHYLLYI+DRLR EL+KKGLL KAWERSA ++RKRH+KA+F+PGIAKHLAARH LG D HQ+RLLEELCKWRDTTAREEDES PYV+PLKV+FG+VRARDKARSVEGLLK+GFPGG++PPL+Y+NA+KLTELI DALDAKID    DR      + +   Q   D K  ++ I               SSS+ S   +  + L  S G + +    KK  + + E   F+   KL+VT  S+S LLDSD +S                    +   +C+   ++ Q  A   R    G   T    + ++  +   G+    V      E +  T   R         V  L  F    +E   K    ++ED++AS + E+A + ++R  S  F V+TD +E  + K   T  V    E  +  TEEV+SL E A+R+      KR                  FDY+ AI+ EE KR +   R+P  ++PM KL  + + D K+  KKRRRGRGRSMSFKA
Sbjct:    1 MCSTTSEQQCGQLLKALEKALRCSQSLPFRDELQLIRVTSPTLKQHTNQLVTQLLSEIKSLASRYAVCIQSSDTDSTSSQSTASISARDSLFDLVTETTDEALQHFNTALDAARNIQNAVVPPQGALNPNASNVKIGTANLGRSYGGFLDLEKPQLHFPDYPIDNSHAPFIPPYSAEHGNQNNVFIQETGDPHSSSR-----HVDTYLQELYKNNSNSESKQRHPYETEILSAQQEMAKKPFAVEETIVFKPMKSTPCAFVTSEEELFNVAERLKKVTAIAVDIENHSVRSFQGFTCLIQISTREEDIIIDTLKLRGAIHRALAPIFTDETIVKVLHGADKDVQWLERDFGVYVVNMFDTGQASRLLKLPSASLAFLLTHFCDVAAISKKKFQLADWRQRPMPHDMFNYARSDTHYLLYIYDRLRAELAKKGLLEKAWERSASIARKRHKKAQFQPGIAKHLAARHSLGLDEHQIRLLEELCKWRDTTAREEDESLPYVSPLKVIFGVVRARDKARSVEGLLKYGFPGGLVPPLIYKNAEKLTELIRDALDAKID----DRAQAKSAAGQDKRQ---DTKIVNIVIDDSS-----------SSSEDSHTERASSGLDESKGAARLQSAEKKVELPRIE---FNPDIKLRVTKLSRSTLLDSDLESXXXXXXXSPRLVPNGSMAQEIRDDDCAGERNTSQHCAEGDRPASIGARQTDRA-MGVEVQFPYSGKHDDYVANTRELE-VGNTQMMRLDTRTASKSVFELSDFSDAEDEPRSKTKAQTIEDRVASVRTELAAENSRRVVSTTFHVETDKLEMSEEKTPPTDQVAKFAELEETKTEEVVSLIEAARRSGADRPAKRRKKGNPPSLHEEIKPMEPFDYDKAIADEEIKRNSSEKRKPKVFNPMQKLNNDWKLDSKKLAKKRRRGRGRSMSFKA 908          
BLAST of Ggra10036.t1 vs. uniprot
Match: R7Q3D8 (Exosome component 10 Rrp6 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3D8_CHOCR)

HSP 1 Score: 568 bits (1465), Expect = 1.130e-185
Identity = 308/594 (51.85%), Postives = 409/594 (68.86%), Query Frame = 0
Query:    6 SKQVCAEVLKALERAIRYSQPLPRRDELQLIRVTSPELKEQGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLPLRDSMFDQTAETTDEALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPFVAPYAKDHYSDPATPHANKRKTPSQNVETYLRELYKKNSNP---DIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKGLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAKIDGATDDRCGGVGHSEELPVQTE---DDLKE--KSVSIKARRVAEGQHKG 591
            SK  C  VLK+L R    S PLP+ D+L+L+    PE      + T +V + + + A+ Y  +  ++D +S SS S+ S+   +++FD+  E TDEAL+ FN ALDRAR I +A     GA+ P T   R+G G       + +++EKPQ+ FPD+P+DNSD  FV P                      +V+ YL+ELY+ NS     +++ +HPYE EI ++ +EM+ + FK E   VY+SM+ TPCTF+ TEE+LF +  RLK+   +A+DIENHSVRSFQGFTCLIQ+STR ED V+DAL LRGS+HRALAPIF DE+ VKVLHGAD+DVQWLERDFG++VVNMFDTGQAARLLK PSA+L++L + FCDV G+SKKKFQL+DWRQRPLP +MF+YARSDTHYLLYI+DRL+ EL+ K L  KAW+RSA+V+RKR++K R++ GI +HL A++ LGFD HQ+RLLEEL  WRD   REEDES  YVAPL  LFGIVRARD+ R+VEGL+K+GFP   +PP++  NA ++  LI D+LDAK+ G  + +C     +   P+Q+    D  KE  K V++  +   EG   G
Sbjct:   19 SKAHCVRVLKSLRRTAVESDPLPQGDDLELLHAVCPETSASLRRATRRVRAAVSAAAACYVPA--ATDPESESSDSAPSVAA-EALFDRVHEATDEALEQFNAALDRARGIQDAEPLETGAVGPET---RLGSGR--HRECAWVEMEKPQMAFPDWPVDNSDTAFVPPGVAG--------------AKGADVDVYLQELYQANSKASGGEMEGKHPYEEEIRAAEEEMAARVFKKEDTVVYRSMKSTPCTFIKTEEKLFEVANRLKRVGEVAIDIENHSVRSFQGFTCLIQMSTRREDVVVDALALRGSVHRALAPIFADESIVKVLHGADKDVQWLERDFGVFVVNMFDTGQAARLLKFPSAALSYLQARFCDVTGTSKKKFQLSDWRQRPLPDDMFQYARSDTHYLLYIYDRLKTELADKELTAKAWKRSAVVARKRYKKTRYDGGIPRHLCAKYGLGFDAHQIRLLEELYGWRDRKGREEDESLNYVAPLGSLFGIVRARDRVRTVEGLMKYGFPSKSVPPMIKANADEIVRLIVDSLDAKL-GDLEKKCA----ARPAPIQSSGAGDGAKEVPKGVAMHRKEAKEGLPSG 585          
BLAST of Ggra10036.t1 vs. uniprot
Match: A0A7S2ZEH5 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZEH5_9RHOD)

HSP 1 Score: 307 bits (787), Expect = 5.670e-88
Identity = 201/551 (36.48%), Postives = 296/551 (53.72%), Query Frame = 0
Query:    1 MDGSNSKQVCAEVLKALERAIRYSQPLPRRDELQLIRVTSPELKEQGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLPLRDSMFDQTAETTDEALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPF--VAPYAKDHYSDPATPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKGLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLF---GIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAK 546
            +DGS  +Q C E+ + +   ++ S  L   +  + +   S E +    KL ++VL  ++ +                   S  S    D +FD   E  ++AL+   +AL    +I       QG L       R    NL + H     ++KPQ+ F D+PIDNSD PF  VA       SD    H N+                   +N  +  +HPYEN+I+ + +  +      ++  ++ S + T  TFV  E +   ++E+L     IAVD+ENHS RS+QGF CL+QISTR+EDFVIDA++LR  ++R L PIF++   VKVLHGA+ DVQWLERDFG+Y+VN+FDT  + +LL+L   SLAFLL  FCDV  S+KKKFQ +DWR RPLP++   YARSDTHYLLYI+DRLR  L +KG+L + W  S+ VS +R+ K R      + L  +  +  D    R++ EL KWRDT AR EDES  +V   +++    G  +     R V+ L +      +   ++ + A  + +++ D ++AK
Sbjct:    7 LDGSVEEQ-CKELTRCIAGGVKQSNSLSGSESHEYLSSVSSEYRRSVRKLNKRVLKVLELLVG-----------------SGVSGKQVDEVFDSVVEYAEDALE---VALTNVEEIGRDG-EEQGELSRSAQFRRPS-ANLAKHH-----LKKPQLDFDDWPIDNSDTPFIPVAERKNPQLSDSVKQHVNRLSI----------------NNESVSLKHPYENDILQAAKSSALLPVP-DRPRLWGSFEKTEFTFVEDEPDFEVMLEKLLGEKEIAVDLENHSERSYQGFCCLMQISTRSEDFVIDAIKLRSIMNRLL-PIFSNPKVVKVLHGANHDVQWLERDFGLYIVNLFDTFASTKLLEL-QGSLAFLLEFFCDVKNSNKKKFQRSDWRVRPLPEDQMNYARSDTHYLLYIYDRLRSMLKEKGVLEECWLNSSTVSLRRYTKPRLPADAGRRLLDKSNMKGDWRTTRVVNELLKWRDTIARREDESPQFVLANELVLEIAGNAKRFASERQVQRLSQR-----VGSEILSKEAASVAQIVSDTVEAK 505          
BLAST of Ggra10036.t1 vs. uniprot
Match: M2XKN4 (Exosome complex exonuclease RRP6 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XKN4_GALSU)

HSP 1 Score: 284 bits (726), Expect = 4.950e-80
Identity = 194/540 (35.93%), Postives = 290/540 (53.70%), Query Frame = 0
Query:   13 VLKALERAIRYSQPLPRRDELQLIRVTSPELKEQGNKLTEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLPLRDSMFDQTAETTDEALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDN--SDAPFVAPYAKDHYSDPATPHANKRKTPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKF-QLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKG-----LLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARS-VEGLLKHGFPGGIIPPLVYQNAKKLTELIGDAL 543
            VLK    A+     LP +DEL     T     E+        L  +  +       I+S +++S    +   L   +++F+ T E  +  L+  +  LD  R I       + +L   T +      +  R+     D+ KPQ  FPDYPI+N  +D   VA         P+    N+    S+ ++++L +L++KN      +   Y  +++  ++  +        VT+Y  ++ T CTFV++   L +++ +L+K   IAVDIENHS RSFQGF CL+Q STR EDFV+DA+ LRG + + L+ I  +   +KVLHGAD DVQWL+RDFG+Y+V+MFDTGQA+R LK P  SL++LL  +C++  S  KK+ QLADWR RPLP++MF YAR DTHYLLYI+DRL  EL +       LL  A+  S  VS   + K +  P   + + +R  L FD  Q   L  LC+WRD  AR EDES  YV P K +  I +   ++ S + G   +      IPPL+     ++ +L+ +++
Sbjct:    7 VLKPFRAAVNCFNQLPLKDELDFYEKTCQPYSEK--------LQSVDHLLKTCLGQIVSQNTNSQGFDTETDL---ETIFENTQEAVEFFLEQTDDCLDALRGIKKT--SEEDSLQSSTPLS----SDERRTRWKQTDMPKPQKKFPDYPINNLLTDPNVVA--------TPSEFSTNESDAFSR-LDSHLFKLHQKNRKHSSAKVSDYYQKLLKELKNNADSFQGSSTVTLYLPLEDTKCTFVNSLSSLEDMITKLEKEKEIAVDIENHSYRSFQGFICLLQFSTRQEDFVVDAIELRGHL-KMLSKILENGNILKVLHGADSDVQWLQRDFGLYIVHMFDTGQASRQLKFPFLSLSYLLKRYCNIDNSKTKKYYQLADWRIRPLPEDMFSYARQDTHYLLYIYDRLCEELRQSSNCNNNLLTCAYRASIQVSMLIYEKPQMNPLEYQSILSRRKLHFDEKQTLALRTLCRWRDEIARIEDESLVYVLPEKCMIEIAKRIPQSESELRGCCPYS-----IPPLLKTYENEVLKLLQESI 514          
BLAST of Ggra10036.t1 vs. uniprot
Match: A0A151ZD76 (3'-5' exonuclease n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZD76_9MYCE)

HSP 1 Score: 288 bits (738), Expect = 2.810e-79
Identity = 203/547 (37.11%), Postives = 300/547 (54.84%), Query Frame = 0
Query:   13 VLKALERAIRYSQPLPRRDELQLIRVTSPELKEQ----GNKLTEQVLSEIKSVASRYAVSIL-SSDSDSCSSHSSGSLPLRDSMFDQTAETTDEALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGRSHGSSLDIEKPQIHFPDYPIDNSDAPFVAPYAKDHYSDPATPHANKRKTPS--QNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKG-----LLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAKI 547
            + + L  A + S  LP  ++      T PE K +    G +L     + ++S   +  +++  ++D++  S   +G + L D M D+  +  D   Q  N   +    IS+ +   Q      T+   +  GN         +I +PQ  F D PIDNS+ PF+ P  K        P+A K   P   Q+ ET   ++ +      +   HPYE EI+S   + + K+ +  +  +YK +  TP T++ T ++L  +VE+LK    IA+D+ENHS RS+QGF CL+Q+STRTEDF+ID L LR  ++R L  +FTD   VKVLHG+D D++WL+RDFG+Y+VNMFDTGQA+R+++ PSASLAFL+ +FC V  +  KK+QLADWR R +P+EM KYAR DTHYLLYI+DRLR EL  KG      +     +S  +S  R+ K   +       AA+  L +   QL  L+ L  WR+  +REEDES  Y+ P +++  IV       SV+ +L        IPP +  +A  L +   D L +KI
Sbjct:   33 LFQKLVSATKISNSLPSEEDYAYYE-TFPEFKSKMGTIGKRLLNLTQNFVQSEDPKTKINLTDTNDTEELSYRFNGIVDLVDEMIDRVDKNIDPKYQQSN---NSNIYISSTITTGQNGK---TNEKNMFYGN---------NIVRPQFKFED-PIDNSNFPFL-PKIK------VKPNALKPLDPIFLQSYETSFGKIVRSKEQETLVYPHPYEYEIMSF--QYTAKQLQPCKEQLYKGLDKTPYTWIDTVQQLDELVEKLKFVEEIAIDLENHSYRSYQGFVCLMQVSTRTEDFIIDTLVLRSQMNR-LNVVFTDPKIVKVLHGSDSDIKWLQRDFGVYIVNMFDTGQASRVMEYPSASLAFLMKYFCSVDAN--KKYQLADWRIRMIPEEMIKYAREDTHYLLYIYDRLRNELFTKGGSKDTFIQLVLAKSRDLSLLRYEKDLIDDYTHIQFAAKSQLQYTPSQLATLKVLYHWRENISREEDESIRYILPNQIMLAIVEK--SPTSVQDILNISTT---IPPHLKVHAHTLIQ---DILKSKI 542          
BLAST of Ggra10036.t1 vs. uniprot
Match: F1Q5Q7 (Exosome component 10 n=2 Tax=Danio rerio TaxID=7955 RepID=F1Q5Q7_DANRE)

HSP 1 Score: 283 bits (723), Expect = 2.550e-78
Identity = 183/480 (38.12%), Postives = 263/480 (54.79%), Query Frame = 0
Query:   92 FDQTAETTDEALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGRSHGSSL----------DIEKPQIHFPDYPIDNSDAPFVAP-YAKDHYSDP-----ATPHANKRKTPSQNVETYLRE-LYKKNSNPDIDQR--HPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKG-----LLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAKI 547
            FD   +  D  L+   I LD A  +S +  P   A   G   P++ + +  R  G S           +I++PQ+ F D  +DNS+ PF++  + K +   P     A  H  K +    +V   L + ++++ +   +D    HPY+ E+   +   + K     +V +YK +  TPC F+ST E+L  + E+L KT+  AVD+E+HS RSF G TCL+QISTR EDF+ID L LR  ++  L   FTD   VKV HGAD D++WL++DFG+YVVNMFDT  AAR L L   SL  LL  +CDV  SS K++QLADWR RPLP EM KYA++DTHYLLY++DR+R +L   G     L+ + W +S  +S K++ K  F       L  +    F+  QL     +  WRD  AREEDES  Y+ P  ++  I  A +  +  +G++    P    PPLV Q   +L +LI  A +  +
Sbjct:  114 FDLVVDANDAILEKVGILLDEASGVSRSQQPVMPA---GYQPPKIIVSSWNRKGGGSRAQTFQLLAAKNIQRPQLKFRDK-VDNSNTPFLSKIFIKPNAVKPLPSYFADKHIRKERPEDLDVPAALADFIHQQRTKEHVDDMFSHPYQYELDHLVMPENLK--CKPEVQMYKPIDETPCQFISTLEDLVALNEKLAKTTEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMY-ILNETFTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHHAARCLNLGRNSLDHLLKVYCDV--SSDKRYQLADWRIRPLPDEMLKYAQADTHYLLYVYDRVRADLFDGGNGQATLIQQVWTKSRDLSLKKYVKPIFTEDSYMELYRKQKKSFNTQQLAAFRLMYAWRDKLAREEDESTGYILPNHMMMKI--ADELPKEPQGIIACCNP---TPPLVRQQINELHQLIKQARETPL 579          
BLAST of Ggra10036.t1 vs. uniprot
Match: exosome component 10-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BEE (exosome component 10-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BEE)

HSP 1 Score: 278 bits (711), Expect = 2.900e-78
Identity = 182/482 (37.76%), Postives = 258/482 (53.53%), Query Frame = 0
Query:   89 DSMFDQTAETTDEALQHFNIALDRARKISNAVVP--PQGALCPGTSVPRVGIGNLGRSHGS---------SLDIEKPQIHFPDYPIDNSDAPFVAPYAKDHYSDPATPHANKRK-------TPSQNVETYLRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKG-----LLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAKI 547
            D   D   E  D  L+     LD+A  +     P  P G    GT V      +  +S            + +IE+PQ+ F D  IDNS+ PF+        +    P  +++K        P+   +   R+       P     HPY+ E+     + + ++   +Q    K +  TP T V+T EEL ++ ++L   S  AVD+E+HS RSFQGFTCL+Q+STR  D+++D L LR  +H  L   FTD   VKV HGAD D+QWL+RDFG+YVVNMFDTGQA+ +L LP  SLA+LL  +CDV     KK+QLADWR RPLP EM +YAR DTHYLL+I+D +R EL  +G     LL    ERS  V  +R++K  +      +L  +H   F++ QL  +  + +WRDT AR+EDES  YV P  +L  +V A    + ++G+     P   +PPLV Q+ + +  L+  A D  +
Sbjct:   96 DDRLDTVVEANDIILERVGSLLDQASGVVKQKEPVLPTGTPQTGTLVSSWNKKSRSKSGSEKSVTWRLLHARNIERPQLKFKDK-IDNSNTPFIPIIRHKPNAHRPLPKYDQQKRHPEDLDVPAALADFIHRQREVHQGQPADLTAHPYQYELEHF--QPTPQQLLKKQPQPSKPIDATPLTLVTTLEELMDMNDKLTMCSEFAVDLEHHSYRSFQGFTCLMQVSTRDHDYIVDTLALRADLH-VLNDTFTDPKVVKVFHGADMDIQWLQRDFGVYVVNMFDTGQASHVLGLPRHSLAYLLKTYCDVEPD--KKYQLADWRIRPLPSEMTQYAREDTHYLLHIYDCMRSELLDRGNNEANLLHNTLERSRQVCLQRYQKLLYTEDSYLNLLNKHKKTFNSQQLHAVRLVYRWRDTIARQEDESTGYVLPNHML--LVLAETLPKQIQGVFACCNP---VPPLVRQHIEDVHRLLVQARDVPL 566          
BLAST of Ggra10036.t1 vs. uniprot
Match: A0A6J2W984 (exosome component 10 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W984_CHACN)

HSP 1 Score: 282 bits (721), Expect = 5.150e-78
Identity = 192/523 (36.71%), Postives = 279/523 (53.35%), Query Frame = 0
Query:   92 FDQTAETTDEALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGR--SHGS---------SLDIEKPQIHFPDYPIDNSDAPFVAP-YAKDHYSDPATP-----HANKRKTPSQNVETYLRE-LYKKNSNPDIDQR--HPYENEI--VSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCELSKKG-----LLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAKIDGATDDRCGGVGHSEELPVQTEDDLKEKSVSIKARRVAEG 587
            FD   ET D  L+   I LD A  ++ A  P   A   G   P++ + +  R  S GS         + +I++PQ+ F +  +DN++ PF++  + K +   P  P     H  +++    +V   L + ++++ +   +D    HPY+ E+  +S  + +  K     +  +YK +  T CTF+ T E+L  + E+L KT+  AVD+E+HS RSF G TCL+Q+STR EDF+ID L LR +++  L   FTD T VKV HGAD D++WL++DF +YVVNMFDT QAAR L L   SL  LL  +C+V   S K++QLADWR RPLP+EM KYAR+DTHYLLY++DRLR +L   G     LL   W +S  +S K++ K  +       L  +    F+  QL     L  WRD  AREEDES  YV P  ++  I     K    +G+L    P   +PPLV Q   +L  L+  A D                   +P+   + L EK ++   +R +EG
Sbjct:  115 FDLVVETNDTILERVGILLDEASGVNRAQQPVMPA---GYQPPKIVVSSWNRKGSSGSRSETFQLLHAKNIQRPQLKFLEK-VDNTNTPFISKIFVKPNAIKPLQPYFTDKHLRRQRPEDLDVPAALADFIHQQRTQEHMDDMFCHPYQYELDHLSMPESLKAKP----EPQMYKPLSETSCTFIDTLEDLVALNEKLAKTTEFAVDLEHHSYRSFLGITCLMQVSTREEDFIIDTLELRANMY-ILNETFTDPTIVKVFHGADSDIEWLQKDFSVYVVNMFDTHQAARALNLGRNSLDHLLKVYCNV--DSDKRYQLADWRIRPLPEEMLKYARADTHYLLYVYDRLRADLLDAGNGQPALLQLVWTKSKDISLKKYVKPIYTEDSYMELYRKQKKIFNTQQLAAFRLLYGWRDKLAREEDESTGYVLPNHMMMKIAEVLPK--EPQGILACCNP---VPPLVRQQINELHLLVKQARD-------------------IPLLKAEVLVEKKIAQTPKRQSEG 602          
BLAST of Ggra10036.t1 vs. uniprot
Match: Q4RVM3 ((spotted green pufferfish) hypothetical protein (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4RVM3_TETNG)

HSP 1 Score: 273 bits (697), Expect = 8.760e-78
Identity = 185/491 (37.68%), Postives = 266/491 (54.18%), Query Frame = 0
Query:   77 CSSH--SSGSLPLRDSMFDQTAETTDEALQHFNIALDRARKISNAVVP--PQGALCPGTSVP---RVGIGNLGRSHGSSL----DIEKPQIHFPDYPIDNSDAPFVAP-YAKDHYSDPATPH-----ANKRKTPSQNVETYLRELYKKNSNPD--IDQ-RHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCEL-----SKKGLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDA 542
            C SH  +  +L  ++  FD   ++ D  L+   I LD A  ++    P  P G   P   V    R G G+ GRS    L    ++ +PQ+ F +  +DNS+ PF+   + K +   P   +      +K K    +V   L +   +    +  +D   HPY+ E+   M  +        +  +YK +  T C+F++T EEL  + E+L + S  AVD+E+HS RSF G TCL+QISTR EDF+ID L LR  ++  L   FTD   VKV HGAD D++WL+RDFG+YVV +FDT QA+R L L   SL  LL+HFC+V  +S K++QLADWR RPLP+EM +YAR+DTHYLLYI+D +R +L      + GLL   W+RS  +S K++ K  F       L  +    F+  QL     L  WRD  AR+EDES  YV P  ++  I  + +  +  +G++    P   +PPLV Q   +L  L+  A
Sbjct:   64 CRSHMMNQNTLTGQEDRFDLMVDSNDAILERVGILLDEADGVNRTQGPVMPAGFQPPKIVVSSWNRKGSGSGGRSEMFRLLHAKNVARPQLKFKEK-VDNSNTPFIPKIFIKPNAVKPLPSYFTNKQMHKEKPEDLDVPAALADFIHQQRTQENVVDMCAHPYQYELDHLM--IPESLLSKSEPQLYKPVAETKCSFITTLEELAALNEKLCQLSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMY-ILNEAFTDPAIVKVFHGADSDIEWLQRDFGLYVVRLFDTHQASRALNLARHSLDHLLTHFCNV--ASDKRYQLADWRIRPLPEEMVQYARADTHYLLYIYDCVRAQLLDFNHGQPGLLKSVWDRSRDISLKKYMKPIFTEESYLELQRKQKKSFNTQQLAAFRLLFAWRDKLARQEDESTGYVLPTHMMIKI--SEELPKEPQGIIACCNP---VPPLVRQQVNELHLLVQQA 543          
BLAST of Ggra10036.t1 vs. uniprot
Match: exosome component 10-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8C1DC (exosome component 10-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8C1DC)

HSP 1 Score: 269 bits (688), Expect = 1.660e-77
Identity = 155/328 (47.26%), Postives = 201/328 (61.28%), Query Frame = 0
Query:  217 HPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTPCTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTEDFVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNMFDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMFKYARSDTHYLLYIFDRLRCEL-----SKKGLLGKAWERSAIVSRKRHRKARFEPGIAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFGIVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELI 539
            HPYE EI     E + +  +  +  + K ++ TP  FV TEE+L ++ + LKK+   AVD+E+HS RSFQGF CL+QISTR +D+VID L LRG +H  L  +FT+   VKV HGAD D+ WL+RDFG+YVVN+FDTGQAAR+L     SL++LL H+C       KKFQLADWR RP+P EM KYAR DTHYLLYI+D L+ +L       K LL   +ERS ++  KR++K  F       L  +    F+  QL  L+EL  WRD  ARE DES  YV P  +L  I  A    R  +G+L    P   IPPLV Q   +L  ++
Sbjct:  136 HPYELEIEKF--EPAEEHLQTVEPELPKPLEETPFIFVKTEEQLKHMCDDLKKSKEFAVDLEHHSYRSFQGFACLMQISTREKDYVIDVLELRGELH-ILNEVFTNPKIVKVFHGADMDILWLQRDFGLYVVNLFDTGQAARVLHFAHLSLSYLLKHYCK--KDLDKKFQLADWRIRPIPPEMLKYAREDTHYLLYIYDCLKNDLITNGNEMKNLLHSTFERSKMICLKRYQKPVFSDDKYLELYKKSKKTFNAKQLYCLKELYGWRDRIARENDESLAYVLPNHMLLQIAEALP--REQQGILACCNP---IPPLVKQQLNELHSIV 453          
The following BLAST results are available for this feature:
BLAST of Ggra10036.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHG18.820e-30053.85Exosome component 10 n=1 Tax=Gracilariopsis chorda... [more]
R7Q3D81.130e-18551.85Exosome component 10 Rrp6 n=1 Tax=Chondrus crispus... [more]
A0A7S2ZEH55.670e-8836.48Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XKN44.950e-8035.93Exosome complex exonuclease RRP6 n=1 Tax=Galdieria... [more]
A0A151ZD762.810e-7937.113'-5' exonuclease n=1 Tax=Tieghemostelium lacteum ... [more]
F1Q5Q72.550e-7838.13Exosome component 10 n=2 Tax=Danio rerio TaxID=795... [more]
exosome component 10-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016045BEE2.900e-7837.76exosome component 10-like n=1 Tax=Branchiostoma fl... [more]
A0A6J2W9845.150e-7836.71exosome component 10 n=1 Tax=Chanos chanos TaxID=2... [more]
Q4RVM38.760e-7837.68(spotted green pufferfish) hypothetical protein (F... [more]
exosome component 10-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A8C1DC1.660e-7747.26exosome component 10-like n=1 Tax=Stegodyphus dumi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 800..820
NoneNo IPR availableCOILSCoilCoilcoord: 747..767
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 881..899
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 849..880
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 810..899
NoneNo IPR availablePANTHERPTHR12124:SF47EXOSOME COMPONENT 10coord: 25..881
NoneNo IPR availableCDDcd06147Rrp6p_like_exocoord: 249..430
e-value: 2.07142E-101
score: 311.839
IPR0025623'-5' exonuclease domainSMARTSM0047435exoneu6coord: 251..422
e-value: 3.4E-36
score: 136.2
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 253..421
e-value: 2.0E-41
score: 141.6
IPR044876HRDC domain superfamilyGENE3D1.10.150.80HRDC domaincoord: 455..550
e-value: 7.2E-20
score: 72.7
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 146..454
e-value: 1.4E-88
score: 298.8
IPR002121HRDC domainPFAMPF00570HRDCcoord: 467..505
e-value: 2.7E-6
score: 27.2
IPR045092Exosome complex exonuclease Rrp6-likePANTHERPTHR12124POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATEDcoord: 25..881
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 205..448
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 461..545

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:114938..117694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10036.t1Ggra10036.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 114938..117694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10036.t1 ID=Ggra10036.t1|Name=Ggra10036.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=900bp
MDGSNSKQVCAEVLKALERAIRYSQPLPRRDELQLIRVTSPELKEQGNKL
TEQVLSEIKSVASRYAVSILSSDSDSCSSHSSGSLPLRDSMFDQTAETTD
EALQHFNIALDRARKISNAVVPPQGALCPGTSVPRVGIGNLGRSHGSSLD
IEKPQIHFPDYPIDNSDAPFVAPYAKDHYSDPATPHANKRKTPSQNVETY
LRELYKKNSNPDIDQRHPYENEIVSSMQEMSTKEFKLEQVTVYKSMQLTP
CTFVSTEEELFNIVERLKKTSAIAVDIENHSVRSFQGFTCLIQISTRTED
FVIDALRLRGSIHRALAPIFTDETTVKVLHGADRDVQWLERDFGIYVVNM
FDTGQAARLLKLPSASLAFLLSHFCDVPGSSKKKFQLADWRQRPLPKEMF
KYARSDTHYLLYIFDRLRCELSKKGLLGKAWERSAIVSRKRHRKARFEPG
IAKHLAARHCLGFDNHQLRLLEELCKWRDTTAREEDESFPYVAPLKVLFG
IVRARDKARSVEGLLKHGFPGGIIPPLVYQNAKKLTELIGDALDAKIDGA
TDDRCGGVGHSEELPVQTEDDLKEKSVSIKARRVAEGQHKGFVGSSSQSS
VVPKTGASLTSLGTSEIYKLTKKQIVCKKETKLFSGGPKLKVTGTSKSAL
LDSDPDSDSVDHVECSNAEHSDQSIAPNGRKGVEYTHTGELHLKDVYECE
GQGSKAVRKVGSPECINETDECREGKGKGEVESLQPFQGISEEAMDKHSV
EDKIASAKAEIAKDQAQRQASLNFCVDTDGIERKDYKKKITRDVQSVEER
TDMTEEVISLREEAKRAEISGSKKRKRKEKLKSSQEQPLPIPAFDYENAI
SREEQKRATRRPDQYDPMWKLRGEREPDVKRRVKKRRRGRGRSMSFKAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0025623'-5'_exonuclease_dom
IPR044876HRDC_dom_sf
IPR036397RNaseH_sf
IPR002121HRDC_dom
IPR045092Rrp6-like
IPR012337RNaseH-like_sf
IPR010997HRDC-like_sf