Ggra10019.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10019.t1
Unique NameGgra10019.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Homology
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A2V3IHJ7 (P4Hc domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ7_9FLOR)

HSP 1 Score: 327 bits (838), Expect = 1.560e-109
Identity = 162/255 (63.53%), Postives = 192/255 (75.29%), Query Frame = 0
Query:   68 MALPQNPVLRHSVAEWGLNIDAQDHFNSISALHVQPPLLRVPNLLTPAQCEALIAAQSANMTESDLYLNYRLNTD------------------------SHSQRCGFRSNVTHDEPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVDGKDCTVLICLQEPKRGGRTIFPKDGVYVEQTQGTALIYHSKEKLLHFAEEVEEGTKWVLQLLIDFAVRSDELDMQVDFATGMV 298
            MALP NP LR SV  WGLNID+ + F +I+AL+  PPLLRVPN LTP QCEALIAAQ+    ES+LYLNYR+N +                        S S R GFR+ V H+E AL+PVL+Q+++LLGF  R FVFAE+LW RPT+RTVVIRDVTTVRY  GEGVP HVDGKDCTVLICLQEP  GGRT+FP+D V+V QT+GTAL+YHSK++LLHFAE VE+GTKWVLQLLIDF VR+DELD+ +D+ TG V
Sbjct:    1 MALPDNPALRESVKCWGLNIDSHNQFAAITALNTDPPLLRVPNFLTPDQCEALIAAQTTKNNESNLYLNYRINQELNSADESEEAAQLIQCTDTADSYVSSSARSGFRAQVHHNEAALQPVLQQLNKLLGFEQREFVFAEELWIRPTKRTVVIRDVTTVRYYVGEGVPPHVDGKDCTVLICLQEPDHGGRTVFPEDAVWVAQTRGTALVYHSKKQLLHFAEAVEKGTKWVLQLLIDFRVRADELDVHIDYKTGAV 255          
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A7S3A606 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A606_9RHOD)

HSP 1 Score: 161 bits (407), Expect = 3.410e-44
Identity = 103/277 (37.18%), Postives = 146/277 (52.71%), Query Frame = 0
Query:   58 STTHRKALLRM-ALPQNPVLRHSVAEWGL-NIDAQDHFNSISALHVQPPLLRVPNLLTPAQCEALIAAQSANMT--------ESDLYLNYRLNT----DSHSQRC--------------------GFRSNVTHDEPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVDGKDCTVLICLQ--EPKRGGRTIFPKDGVYVEQTQGTALIYHSKEKLLHFAEEVEEGTKWVLQLLIDFAVRSDELDMQVDFATGMV 298
            S TH +   R+ A+ +   L+  + +WGL N+D ++ F     +H  PP+  + + L P +C  +I  Q A  T        ESDLYLNYR+N     DS S+                      GFR  V    P +RP+L ++ R +G   R+  F E +W +P +RT+ IRD T V Y   EGV  HVDGKD T+L  L   E   GG+T FP+ G+ V+   G+AL+Y S + LLH+AE V +G KW++QLLIDF  + D     VD+ TG +
Sbjct:   13 SRTHARRKGRVCAVQKTEKLKGLLEKWGLPNMDLENEFGRAKLIHEDPPIFMIDDFLDPTRC--MILRQYARRTRQQNEQGAESDLYLNYRVNAEKREDSSSEEAKQLLEEQNIPTSTLSADMGSGFRLQVP--PPLVRPILPELLRFMGLEGRNAEFEEGIWYKPNKRTMYIRDQTVVHYMLNEGVAPHVDGKDATLLCYLNDVEDDSGGKTCFPEIGLSVKAKAGSALLYESNKGLLHYAEAVTKGEKWIMQLLIDF--KYDPNIPAVDYKTGQI 283          
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A7S3ZRN3 (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRN3_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.250e-37
Identity = 87/247 (35.22%), Postives = 130/247 (52.63%), Query Frame = 0
Query:   72 QNPVLRHSVAEWGLNIDAQDHFNSISALHVQPPLLRVPNLLTPAQCEALI-AAQSANMTESDLYLNYRLNTDSHSQRCGFRSNVTHD-----------------EPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVDGKDCTVLICLQEPKRGGRTIFPKDGVYVEQTQGTALIYHSKEKLLHFAEEVEEG-TKWVLQLLIDFAVRSDELDMQ-VDFATGMV 298
            Q+ ++    A W    + +D    ++  H  PP+L++ N L+ A+C  +I AA+  ++   + YLN+R+N D      G+      +                    L  V  +   LLG ++R++ F E+L+ RP R TV++RD T VRY  GEGV  HVDGKD T+L+ L   + GG T+FP+DG+     QG AL+Y S+  LLH+A  V  G  KW+LQLLID  +      M  VD+ TG +
Sbjct:   37 QDEIMATIGAAWETAPNTRDF--DVTLEHRAPPVLKIQNFLSDAECAQIIEAARGDDVEVCEEYLNHRVNEDGAVATSGYSEEQAQEALEWSDGATSGLRVRMPSDILDLVAPKALSLLGLSHRNYRFKEELYYRPDRATVIVRDATVVRYREGEGVAPHVDGKDATLLVYLNTCRGGGHTVFPEDGLAFPPRQGGALLYDSRLDLLHYAAPVHAGHEKWILQLLIDHRLPPGHEHMPLVDWDTGAI 281          
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A5J4YQD4 (Fe2OG dioxygenase domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQD4_PORPP)

HSP 1 Score: 135 bits (339), Expect = 8.840e-34
Identity = 86/233 (36.91%), Postives = 126/233 (54.08%), Query Frame = 0
Query:   85 LNIDAQDHFNSISALHVQPP-----LLRVPNLLTPAQCEALIAAQSANM----TESDLYLNYRLNTD------------------------SHSQRCGFRSNVTHDEPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVDGKDCTVLICLQE-PKRGGRTIFPKDGVYVEQTQGTALIYHSKEKLLHFAEEVEEGTKWVLQLLIDFAVR 283
            +++DA  + N+   LH++ P     +L     L+P +CE +I   +        E+DLYLNYR+N +                          S   GFR  + H E   + V+ ++ RL G   R+  F+E L  +P  RT+VIRD T V Y+  EGV  HVDGKD T+L+ L + P++GG T+F    + V  T+GTAL+Y SK +L H+++ V EGTKW++QLLID  VR
Sbjct:   76 IDLDAPPYTNA-RVLHLETPSNADLILSFEEFLSPDECEFIIEEATRQHDKPGAEADLYLNYRVNRELDAGGYSSEADALSSDEELSSAELETSAGSGFRVQLNH-ELVKQVVVPKLMRLFGMEERAADFSECLSVKPDPRTLVIRDCTCVLYKLAEGVAPHVDGKDATLLVYLCDGPEQGGHTVFIDQALSVPPTRGTALLYMSKTQLPHYSQRVGEGTKWIMQLLIDHRVR 306          
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A7S2NT26 (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NT26_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.350e-30
Identity = 71/139 (51.08%), Postives = 93/139 (66.91%), Query Frame = 0
Query:  149 GFRSNVTHDEPALRPVL-EQIHRLLGFTNRS--FVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVDGKDCTVLICLQ--EPKRGGRTIFPKDGVYVEQTQGTALIYHSKEKLLHFAEEVEE--GTKWVLQLLIDF 280
            GFR  V  +E  +  +L E++  L+G   RS  F+F E    RPT R +VIRD T VRYE G+GVP HVDGKD T+LI L   +   GGRT+FP+DG+ V   QGTAL+Y SKE+LLHF+E ++     K++LQLLID+
Sbjct:   66 GFR--VRANEKFIENLLSERLLFLMGLQERSDGFLFEESPVLRPTPRRIVIRDQTIVRYEKGDGVPPHVDGKDATLLIYLNTVDDDAGGRTVFPEDGLAVPPIQGTALLYRSKEELLHFSEPIKRDGNVKYILQLLIDY 202          
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A8J5Y3R0 (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y3R0_DIALT)

HSP 1 Score: 123 bits (309), Expect = 3.570e-29
Identity = 65/131 (49.62%), Postives = 77/131 (58.78%), Query Frame = 0
Query:  170 RLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVDGKDCTVLICLQEPKRG--GRTIFPKDGVYVEQTQGTALIYHSKEKLLHFAEEVEEGTKWVLQLLIDFAVRSDELDMQVDFATGMV 298
            RL+G   R    AE +W +  RR VVIRD T V Y  GEGV  HVDGKD T+L+ L     G  GRT+F +DG       G AL+Y SK +LLH++E +  G KWVLQLLIDF          VDFATG V
Sbjct:  218 RLMGLPKRRLRVAEGIWVKADRRYVVIRDATVVHYREGEGVAPHVDGKDATLLVYLNTVAEGAGGRTVFVEDGFASRPQAGRALMYWSKNELLHYSEAINRGEKWVLQLLIDFRHADAGTGPYVDFATGQV 348          
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A7R9UGH4 (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGH4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.910e-23
Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 0
Query:  159 PALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVDGKDCTVLICLQEPKRG--GRTIFPKDGVYVEQTQGTALIYHSK-EKLLHFAEEVEEGT-KWVLQLLIDFAVRS 284
            PA   +  ++  LL        F+E+LW  P+  +V+ RD T V Y  GEGV  HVDGKD T+L+ L +   G  GRT+FP+ G+ V   +G+AL+Y SK  KLLHFAE V+ G  KWV Q+LID+  R+
Sbjct:  190 PAEGSIARRVLDLLELGRDYVQFSEKLWYHPSNDSVMFRDQTIVHYVGGEGVAPHVDGKDVTILLYLNDVPHGAGGRTVFPEAGIAVPPQRGSALMYCSKGNKLLHFAERVKPGAEKWVSQMLIDYRFRA 319          
BLAST of Ggra10019.t1 vs. uniprot
Match: F4PI47 (Putative prolyl 4-hydroxylase alpha subunit n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PI47_CAVFA)

HSP 1 Score: 67.0 bits (162), Expect = 2.550e-9
Identity = 52/202 (25.74%), Postives = 89/202 (44.06%), Query Frame = 0
Query:  103 PPLLRVPNLLTPAQCEALIAAQSANMTESDLYLNYRLNTDSHSQRCG-FRSNVTHDEPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHVD-----------------GKDCTVLICLQEPKRGGRTIFPKDGVYVEQTQGTALIYHSKEK-------LLHFAEEVEEGTKWVLQLLID 279
            P + RVP+ L+PA+CE LI     +++++ L     +++  H    G F      D   ++ + +++  L+  T    V                  +  +RY PGE   AH D                  + CT+L+ L E + GG T FP+ GV V+  +G A+++++ +         LH  + V +GTKWV   LI+
Sbjct:   33 PRVYRVPDFLSPAECEHLI-----DISKNKLRPCNEISSGVHRSGWGLFMKEGEEDHDVVKKIFQRMKMLVNLTENCEV------------------MQVIRYHPGEETSAHYDYFNPLTTNGAMKIGLYGQRVCTILMYLSEVEEGGETSFPEVGVKVKPVKGDAVLFYNCKPNGEVDPLSLHQGDPVIKGTKWVAIKLIN 211          
BLAST of Ggra10019.t1 vs. uniprot
Match: A0A4Q3M381 (2-oxoglutarate-dependent dioxygenase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q3M381_9BURK)

HSP 1 Score: 65.9 bits (159), Expect = 1.160e-8
Identity = 62/217 (28.57%), Postives = 96/217 (44.24%), Query Frame = 0
Query:   71 PQNPVLRHSVAEWGLNIDAQDHFNSISALHVQPPLLRVPNLLTPAQCEALIAAQSANMTESDLYLNYR-----LNTDSHSQRCGFRSNVTHDEPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGE-GVPAHV---DGKDCTVLICLQEPKRGGRTIFPKDGVYVEQTQGTALIY-----HSKEKLLHFAEEVEEGTKWV 273
            P  PV   ++A+  L ID  D    +     QP ++   NLL+P +CEA++AA    M  S L +  R     +N D  S+   F+     +  A+R + E+I RL+ +        + L   P        D     ++PGE G P  +     +  T++I L EP +GG T+FP   + V   QG A+ +     H   + LH    V  G KW+
Sbjct:   88 PAVPVPEPALADSPLRIDVGDRQVEVLMAMAQPRIVLFGNLLSPKECEAIVAAAQPRMARS-LTVATRTGGEEVNDDRTSEGMFFQRG---ENDAVRRLEERIARLVQWPIEHGEGLQVLRYGPGAEYKPHYDY----FDPGEPGTPTILRRGGQRVATLVIYLNEPAQGGGTVFPDVQLEVSPRQGNAVFFSYDRPHPSTRTLHGGSPVLAGEKWI 296          
BLAST of Ggra10019.t1 vs. uniprot
Match: J3D5R7 (2OG-Fe(II) oxygenase superfamily enzyme n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=J3D5R7_9BURK)

HSP 1 Score: 64.7 bits (156), Expect = 2.280e-8
Identity = 61/217 (28.11%), Postives = 96/217 (44.24%), Query Frame = 0
Query:   71 PQNPVLRHSVAEWGLNIDAQDHFNSISALHVQPPLLRVPNLLTPAQCEALIAAQSANMTESDLYLNYR-----LNTDSHSQRCGFRSNVTHDEPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVTTVRYEPGEGVPAHV----DGKDCTVLICLQEPKRGGRTIFPKDGVYVEQTQGTALIY-----HSKEKLLHFAEEVEEGTKWV 273
            P   V R      G  +DA D + ++      P L    NLL+ A+CEALIAA  + +  S L ++ R     LN D  S    +      +   +R +  +I RLL +  ++    E L     RR    +      ++PGE   A +      +  ++++ L+EP  GG T+FP  G+ V   QG+A+ +     H     LH  E V+ G KW+
Sbjct:   58 PAQAVPRVQADAAGAMVDAGDKWVTVREHRSAPELWVFDNLLSAAECEALIAAAESRLARS-LTVDIRTGGEELNHDRTSHGMFYTRG---ENEVIRRIEARIARLLNWPVQN---GEGLQVLRYRRGAEYKPHYDY-FDPGEPGTAAILRRGGQRVASLIMYLREPGEGGATVFPDIGLKVRPQQGSAVFFSYALAHPASLTLHGGEPVKSGEKWI 266          
The following BLAST results are available for this feature:
BLAST of Ggra10019.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3IHJ71.560e-10963.53P4Hc domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S3A6063.410e-4437.18Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3ZRN34.250e-3735.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5J4YQD48.840e-3436.91Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2NT263.350e-3051.08Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A8J5Y3R03.570e-2949.62Uncharacterized protein n=3 Tax=Diacronema lutheri... [more]
A0A7R9UGH45.910e-2345.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F4PI472.550e-925.74Putative prolyl 4-hydroxylase alpha subunit n=1 Ta... [more]
A0A4Q3M3811.160e-828.572-oxoglutarate-dependent dioxygenase n=1 Tax=Comam... [more]
J3D5R72.280e-828.112OG-Fe(II) oxygenase superfamily enzyme n=2 Tax=un... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006620Prolyl 4-hydroxylase, alpha subunitSMARTSM00702p4hccoord: 103..279
e-value: 7.3E-6
score: 35.5
NoneNo IPR availableGENE3D2.60.120.620q2cbj1_9rhob like domaincoord: 85..278
e-value: 5.7E-25
score: 90.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..61
IPR045054Prolyl 4-hydroxylasePANTHERPTHR10869PROLYL 4-HYDROXYLASE ALPHA SUBUNITcoord: 68..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000222_piloncontigtig00000222_pilon:77290..78198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10019.t1Ggra10019.t1Gracilaria gracilis GNS1m malemRNAtig00000222_pilon 77290..78198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10019.t1 ID=Ggra10019.t1|Name=Ggra10019.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MKENLTSPAKLFKLFPKTSSLSNRTDIPTTTKMPDSTPKHAFMAPLTLSS
RRHNQQPSTTHRKALLRMALPQNPVLRHSVAEWGLNIDAQDHFNSISALH
VQPPLLRVPNLLTPAQCEALIAAQSANMTESDLYLNYRLNTDSHSQRCGF
RSNVTHDEPALRPVLEQIHRLLGFTNRSFVFAEQLWTRPTRRTVVIRDVT
TVRYEPGEGVPAHVDGKDCTVLICLQEPKRGGRTIFPKDGVYVEQTQGTA
LIYHSKEKLLHFAEEVEEGTKWVLQLLIDFAVRSDELDMQVDFATGMVQV
AS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006620Pro_4_hyd_alph
IPR045054P4HA-like