Ggra9991.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ggra9991.t1
Unique Name	Ggra9991.t1
Type	mRNA
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	677

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at tig00000213_pilon:123960..125990-
coding sequence from alignment at tig00000213_pilon:123960..125990-

mRNA sequence

>Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=677bp
MLRSPSFDFEAQFHHAQEGYSDSKLHIDLNSPMDRRLQRKIVVCQKRFHR
YRSRTPPPHARQESNPSIDQAHITRKPLIKNIPRALKTFISRSPISQPQN
VPLRLNRLHGADHSRMSVLSPSLRKEFRKISYQNPQSSHIVVNVDSSASP
QSPRKRNSRRQSIPHPQPQLHLQTQTQPQPQLLLQTRAQHKPTLKPVRLA
GDDHNDIVPTQIVPSRQSPPSSLNENHEHIAMELKSTASVSSRSVQEQNQ
TVHLPEEQAVHEQQSDAPSKPTELPLNISTLINKYDKNNSTPDKSNNNIE
RLSLIPEAQHKVATMRALFEADQAERQRLSSLKSPPRSNTTPFLKPKPYN
AISQPSVERTSFSPLSTTSPSISTLRNNPEQIPKRHGTRFVKLVDSPKSP
IDHKGIGTEGSVISSVTKTPDDDTILGDTDLEEERIALDPISRVQEADHR
DIPERMNLRDLFESLELSPDEKETTAVKSPKSNKSRERSSTVAKLIARYG
GTDQSTEKENGRRLETENDAPRKEKRTVEEKVNRSLVMDEGDEIQKVYKT
EAKDKKKLGRSVDQIPERQGGVEAIPWEARIKSFNAEVEEAASMAYIRKV
MSHDGENDRFKSFSVYSGTDQDSQLRTRSEASGRRWRRRSARAQNKSWLS
RKANEQVHKVKKRVGTMRNIISADDY*

spliced messenger RNA

>Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2031bp|location=Sequence derived from alignment at tig00000213_pilon:123960..125990- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTCGTTCGCCGTCGTTTGACTTCGAGGCGCAGTTTCATCACGCTCA
GGAGGGCTATTCCGATTCCAAGCTGCATATCGACCTCAACTCCCCGATGG
ATCGTCGTCTGCAGCGCAAGATCGTCGTTTGTCAGAAGCGCTTCCATCGC
TACAGGTCCAGGACGCCGCCGCCACACGCGCGTCAGGAGTCGAACCCGTC
TATTGATCAAGCGCATATCACGCGCAAGCCTTTGATCAAGAACATTCCTC
GCGCCTTGAAGACGTTCATTTCGCGCTCTCCCATTTCGCAGCCGCAGAAT
GTCCCACTCAGGCTTAACCGTTTGCACGGTGCCGACCACAGCCGTATGTC
TGTATTGTCACCCTCGCTTCGTAAGGAGTTTCGAAAGATAAGCTATCAGA
ATCCCCAGTCTTCTCACATTGTTGTCAACGTTGACTCATCTGCGTCGCCA
CAGTCTCCGAGGAAGAGGAATTCGAGGCGCCAAAGTATCCCACACCCACA
GCCTCAATTGCACCTCCAAACTCAAACTCAACCTCAACCGCAGCTGCTTC
TCCAGACCCGAGCGCAGCACAAGCCCACTTTGAAGCCTGTTCGCCTAGCT
GGTGATGATCACAATGACATTGTTCCTACACAAATTGTACCTTCGAGGCA
ATCCCCCCCATCGAGCTTGAACGAAAATCACGAGCACATCGCAATGGAAC
TCAAGAGCACGGCTTCCGTTTCATCCCGCAGCGTCCAAGAACAAAATCAA
ACAGTTCATCTTCCGGAAGAACAAGCAGTCCATGAGCAGCAATCCGACGC
ACCATCTAAACCAACTGAGCTTCCCCTCAACATATCGACATTGATTAATA
AGTATGACAAGAATAACTCTACGCCAGACAAATCGAACAACAACATCGAG
CGGCTCTCACTCATCCCCGAGGCTCAACACAAAGTCGCTACCATGCGAGC
TCTATTTGAAGCCGATCAGGCAGAACGGCAGCGTCTGTCATCGTTGAAGA
GCCCCCCGCGAAGCAATACTACGCCGTTCTTGAAACCCAAACCGTACAAC
GCTATATCTCAACCAAGTGTGGAAAGAACCTCTTTCTCACCGTTAAGTAC
AACCTCCCCATCCATTAGCACGTTACGAAACAACCCTGAACAGATTCCGA
AACGTCATGGAACCCGTTTTGTGAAACTCGTTGACAGTCCGAAGTCTCCT
ATTGATCATAAGGGCATCGGTACAGAAGGTTCTGTGATTTCTTCTGTGAC
GAAGACTCCAGACGATGATACAATTTTGGGCGACACAGATTTGGAGGAAG
AACGCATAGCTTTAGACCCTATATCTCGTGTACAGGAAGCTGATCACCGG
GATATCCCGGAAAGGATGAACTTGAGGGATCTCTTTGAGTCGCTCGAACT
GTCTCCGGATGAAAAGGAGACTACGGCTGTCAAGAGCCCCAAATCTAACA
AAAGCAGAGAACGTTCTTCAACCGTTGCAAAGCTCATCGCCAGATACGGG
GGAACTGATCAATCGACCGAGAAGGAGAATGGTCGTAGGTTGGAAACAGA
AAACGACGCTCCACGAAAGGAAAAGCGTACAGTTGAGGAAAAGGTGAACA
GATCGCTTGTTATGGACGAAGGGGATGAGATCCAGAAGGTGTACAAGACT
GAGGCGAAGGACAAAAAGAAACTTGGACGATCAGTAGACCAGATCCCGGA
ACGTCAGGGAGGGGTTGAAGCCATTCCCTGGGAAGCCCGTATCAAATCCT
TCAACGCAGAAGTAGAGGAAGCCGCGAGCATGGCATATATCAGAAAAGTT
ATGTCTCATGACGGAGAGAACGATCGCTTCAAGTCTTTCAGTGTTTATAG
TGGCACGGACCAAGACTCGCAGTTGAGGACAAGAAGTGAGGCGAGTGGCC
GTAGGTGGCGAAGGCGTAGTGCTCGAGCACAAAACAAGTCTTGGTTATCC
AGAAAAGCTAATGAACAAGTGCACAAAGTGAAGAAACGTGTTGGTACGAT
GAGAAATATTATATCTGCTGACGATTATTAG

protein sequence of Ggra9991.t1

>Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MLRSPSFDFEAQFHHAQEGYSDSKLHIDLNSPMDRRLQRKIVVCQKRFHR
YRSRTPPPHARQESNPSIDQAHITRKPLIKNIPRALKTFISRSPISQPQN
VPLRLNRLHGADHSRMSVLSPSLRKEFRKISYQNPQSSHIVVNVDSSASP
QSPRKRNSRRQSIPHPQPQLHLQTQTQPQPQLLLQTRAQHKPTLKPVRLA
GDDHNDIVPTQIVPSRQSPPSSLNENHEHIAMELKSTASVSSRSVQEQNQ
TVHLPEEQAVHEQQSDAPSKPTELPLNISTLINKYDKNNSTPDKSNNNIE
RLSLIPEAQHKVATMRALFEADQAERQRLSSLKSPPRSNTTPFLKPKPYN
AISQPSVERTSFSPLSTTSPSISTLRNNPEQIPKRHGTRFVKLVDSPKSP
IDHKGIGTEGSVISSVTKTPDDDTILGDTDLEEERIALDPISRVQEADHR
DIPERMNLRDLFESLELSPDEKETTAVKSPKSNKSRERSSTVAKLIARYG
GTDQSTEKENGRRLETENDAPRKEKRTVEEKVNRSLVMDEGDEIQKVYKT
EAKDKKKLGRSVDQIPERQGGVEAIPWEARIKSFNAEVEEAASMAYIRKV
MSHDGENDRFKSFSVYSGTDQDSQLRTRSEASGRRWRRRSARAQNKSWLS
RKANEQVHKVKKRVGTMRNIISADDY*

mRNA from alignment at tig00000213_pilon:123960..125990-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2031bp|location=Sequence derived from alignment at tig00000213_pilon:123960..125990- (Gracilaria gracilis GNS1m male)
ATGCTTCGTTCGCCGTCGTTTGACTTCGAGGCGCAGTTTCATCACGCTCA
GGAGGGCTATTCCGATTCCAAGCTGCATATCGACCTCAACTCCCCGATGG
ATCGTCGTCTGCAGCGCAAGATCGTCGTTTGTCAGAAGCGCTTCCATCGC
TACAGGTCCAGGACGCCGCCGCCACACGCGCGTCAGGAGTCGAACCCGTC
TATTGATCAAGCGCATATCACGCGCAAGCCTTTGATCAAGAACATTCCTC
GCGCCTTGAAGACGTTCATTTCGCGCTCTCCCATTTCGCAGCCGCAGAAT
GTCCCACTCAGGCTTAACCGTTTGCACGGTGCCGACCACAGCCGTATGTC
TGTATTGTCACCCTCGCTTCGTAAGGAGTTTCGAAAGATAAGCTATCAGA
ATCCCCAGTCTTCTCACATTGTTGTCAACGTTGACTCATCTGCGTCGCCA
CAGTCTCCGAGGAAGAGGAATTCGAGGCGCCAAAGTATCCCACACCCACA
GCCTCAATTGCACCTCCAAACTCAAACTCAACCTCAACCGCAGCTGCTTC
TCCAGACCCGAGCGCAGCACAAGCCCACTTTGAAGCCTGTTCGCCTAGCT
GGTGATGATCACAATGACATTGTTCCTACACAAATTGTACCTTCGAGGCA
ATCCCCCCCATCGAGCTTGAACGAAAATCACGAGCACATCGCAATGGAAC
TCAAGAGCACGGCTTCCGTTTCATCCCGCAGCGTCCAAGAACAAAATCAA
ACAGTTCATCTTCCGGAAGAACAAGCAGTCCATGAGCAGCAATCCGACGC
ACCATCTAAACCAACTGAGCTTCCCCTCAACATATCGACATTGATTAATA
AGTATGACAAGAATAACTCTACGCCAGACAAATCGAACAACAACATCGAG
CGGCTCTCACTCATCCCCGAGGCTCAACACAAAGTCGCTACCATGCGAGC
TCTATTTGAAGCCGATCAGGCAGAACGGCAGCGTCTGTCATCGTTGAAGA
GCCCCCCGCGAAGCAATACTACGCCGTTCTTGAAACCCAAACCGTACAAC
GCTATATCTCAACCAAGTGTGGAAAGAACCTCTTTCTCACCGTTAAGTAC
AACCTCCCCATCCATTAGCACGTTACGAAACAACCCTGAACAGATTCCGA
AACGTCATGGAACCCGTTTTGTGAAACTCGTTGACAGTCCGAAGTCTCCT
ATTGATCATAAGGGCATCGGTACAGAAGGTTCTGTGATTTCTTCTGTGAC
GAAGACTCCAGACGATGATACAATTTTGGGCGACACAGATTTGGAGGAAG
AACGCATAGCTTTAGACCCTATATCTCGTGTACAGGAAGCTGATCACCGG
GATATCCCGGAAAGGATGAACTTGAGGGATCTCTTTGAGTCGCTCGAACT
GTCTCCGGATGAAAAGGAGACTACGGCTGTCAAGAGCCCCAAATCTAACA
AAAGCAGAGAACGTTCTTCAACCGTTGCAAAGCTCATCGCCAGATACGGG
GGAACTGATCAATCGACCGAGAAGGAGAATGGTCGTAGGTTGGAAACAGA
AAACGACGCTCCACGAAAGGAAAAGCGTACAGTTGAGGAAAAGGTGAACA
GATCGCTTGTTATGGACGAAGGGGATGAGATCCAGAAGGTGTACAAGACT
GAGGCGAAGGACAAAAAGAAACTTGGACGATCAGTAGACCAGATCCCGGA
ACGTCAGGGAGGGGTTGAAGCCATTCCCTGGGAAGCCCGTATCAAATCCT
TCAACGCAGAAGTAGAGGAAGCCGCGAGCATGGCATATATCAGAAAAGTT
ATGTCTCATGACGGAGAGAACGATCGCTTCAAGTCTTTCAGTGTTTATAG
TGGCACGGACCAAGACTCGCAGTTGAGGACAAGAAGTGAGGCGAGTGGCC
GTAGGTGGCGAAGGCGTAGTGCTCGAGCACAAAACAAGTCTTGGTTATCC
AGAAAAGCTAATGAACAAGTGCACAAAGTGAAGAAACGTGTTGGTACGAT
GAGAAATATTATATCTGCTGACGATTATTAG

Coding sequence (CDS) from alignment at tig00000213_pilon:123960..125990-

>Ggra9991.t1 ID=Ggra9991.t1|Name=Ggra9991.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2031bp|location=Sequence derived from alignment at tig00000213_pilon:123960..125990- (Gracilaria gracilis GNS1m male)
ATGCTTCGTTCGCCGTCGTTTGACTTCGAGGCGCAGTTTCATCACGCTCA
GGAGGGCTATTCCGATTCCAAGCTGCATATCGACCTCAACTCCCCGATGG
ATCGTCGTCTGCAGCGCAAGATCGTCGTTTGTCAGAAGCGCTTCCATCGC
TACAGGTCCAGGACGCCGCCGCCACACGCGCGTCAGGAGTCGAACCCGTC
TATTGATCAAGCGCATATCACGCGCAAGCCTTTGATCAAGAACATTCCTC
GCGCCTTGAAGACGTTCATTTCGCGCTCTCCCATTTCGCAGCCGCAGAAT
GTCCCACTCAGGCTTAACCGTTTGCACGGTGCCGACCACAGCCGTATGTC
TGTATTGTCACCCTCGCTTCGTAAGGAGTTTCGAAAGATAAGCTATCAGA
ATCCCCAGTCTTCTCACATTGTTGTCAACGTTGACTCATCTGCGTCGCCA
CAGTCTCCGAGGAAGAGGAATTCGAGGCGCCAAAGTATCCCACACCCACA
GCCTCAATTGCACCTCCAAACTCAAACTCAACCTCAACCGCAGCTGCTTC
TCCAGACCCGAGCGCAGCACAAGCCCACTTTGAAGCCTGTTCGCCTAGCT
GGTGATGATCACAATGACATTGTTCCTACACAAATTGTACCTTCGAGGCA
ATCCCCCCCATCGAGCTTGAACGAAAATCACGAGCACATCGCAATGGAAC
TCAAGAGCACGGCTTCCGTTTCATCCCGCAGCGTCCAAGAACAAAATCAA
ACAGTTCATCTTCCGGAAGAACAAGCAGTCCATGAGCAGCAATCCGACGC
ACCATCTAAACCAACTGAGCTTCCCCTCAACATATCGACATTGATTAATA
AGTATGACAAGAATAACTCTACGCCAGACAAATCGAACAACAACATCGAG
CGGCTCTCACTCATCCCCGAGGCTCAACACAAAGTCGCTACCATGCGAGC
TCTATTTGAAGCCGATCAGGCAGAACGGCAGCGTCTGTCATCGTTGAAGA
GCCCCCCGCGAAGCAATACTACGCCGTTCTTGAAACCCAAACCGTACAAC
GCTATATCTCAACCAAGTGTGGAAAGAACCTCTTTCTCACCGTTAAGTAC
AACCTCCCCATCCATTAGCACGTTACGAAACAACCCTGAACAGATTCCGA
AACGTCATGGAACCCGTTTTGTGAAACTCGTTGACAGTCCGAAGTCTCCT
ATTGATCATAAGGGCATCGGTACAGAAGGTTCTGTGATTTCTTCTGTGAC
GAAGACTCCAGACGATGATACAATTTTGGGCGACACAGATTTGGAGGAAG
AACGCATAGCTTTAGACCCTATATCTCGTGTACAGGAAGCTGATCACCGG
GATATCCCGGAAAGGATGAACTTGAGGGATCTCTTTGAGTCGCTCGAACT
GTCTCCGGATGAAAAGGAGACTACGGCTGTCAAGAGCCCCAAATCTAACA
AAAGCAGAGAACGTTCTTCAACCGTTGCAAAGCTCATCGCCAGATACGGG
GGAACTGATCAATCGACCGAGAAGGAGAATGGTCGTAGGTTGGAAACAGA
AAACGACGCTCCACGAAAGGAAAAGCGTACAGTTGAGGAAAAGGTGAACA
GATCGCTTGTTATGGACGAAGGGGATGAGATCCAGAAGGTGTACAAGACT
GAGGCGAAGGACAAAAAGAAACTTGGACGATCAGTAGACCAGATCCCGGA
ACGTCAGGGAGGGGTTGAAGCCATTCCCTGGGAAGCCCGTATCAAATCCT
TCAACGCAGAAGTAGAGGAAGCCGCGAGCATGGCATATATCAGAAAAGTT
ATGTCTCATGACGGAGAGAACGATCGCTTCAAGTCTTTCAGTGTTTATAG
TGGCACGGACCAAGACTCGCAGTTGAGGACAAGAAGTGAGGCGAGTGGCC
GTAGGTGGCGAAGGCGTAGTGCTCGAGCACAAAACAAGTCTTGGTTATCC
AGAAAAGCTAATGAACAAGTGCACAAAGTGAAGAAACGTGTTGGTACGAT
GAGAAATATTATATCTGCTGACGATTATTAG