Ggra992.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra992.t1
Unique NameGgra992.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length509
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:88475..90001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra992Ggra992Gracilaria gracilis GNS1m malegenetig00000027_pilon 88475..90001 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra992.t1.stop1Ggra992.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000027_pilon 88475..88477 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra992.t1.CDS1Ggra992.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000027_pilon 88475..90001 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra992.t1.exon1Ggra992.t1.exon1Gracilaria gracilis GNS1m maleexontig00000027_pilon 88475..90001 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra992.t1.start1Ggra992.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000027_pilon 89999..90001 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra992.t1Ggra992.t1Gracilaria gracilis GNS1m malepolypeptidetig00000027_pilon 88475..90001 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra992.t1 ID=Ggra992.t1|Name=Ggra992.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=509bp
MNRLSSVVVLILLALCVSWLCCVSLAQLPEPAEPPPRQDVEEGKLILPAD
YTYLYHLLPNASKRTPDLLTYLGYVREHMRQMLTLVHEVDAIVTQFTRNT
SNAPLTTCNYRDTGIDWVGNANRFFEHRRLGSFDSSCVTEAFDSSLQNAS
LQRSSSDPTAYEPENLFRLINAYGQGLDRISSRLAQLAQPPRWDDPQQAA
RSNSFQYEDRSQMCTHDFVGFAKVNGKWYINTRITYRDPLLTLGFNERLY
INELDGGDLDNFSVQPVTLVKPGAAREPKTESRDFEIWRNDSWVVSRTAF
EQQSGAAFASQFGNIFPTDNPAINLALDRGKHSTELAFDATTPSNVAILA
LPLAMNIVPVALIADVNTFGMLVYTLLTDVLTAVPLAIKGVEVLLIGKRT
RYGAVALISGGNLFEVGDELQNKAAEFWVAKCKPEGDFIVAGTSLLVVAL
FFMVGGIIAEFVAKRWVQRKRQFDMENFVNQQSISQSLLSPQAAALVMSN
ENARNKRD*
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spliced messenger RNA

>Ggra992.t1 ID=Ggra992.t1|Name=Ggra992.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1527bp|location=Sequence derived from alignment at tig00000027_pilon:88475..90001- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATCGTCTCTCGTCCGTCGTCGTCCTCATCCTCCTCGCGCTGTGCGT
GTCGTGGCTGTGCTGCGTGTCGCTCGCGCAGCTGCCCGAGCCGGCGGAGC
CGCCACCCAGGCAGGACGTGGAGGAGGGAAAGCTCATCTTGCCCGCCGAC
TACACCTACTTGTACCATCTGCTGCCAAACGCCTCCAAACGCACGCCGGA
CTTGCTCACCTATCTGGGGTACGTGCGCGAGCACATGCGACAAATGCTCA
CACTGGTGCACGAAGTGGATGCCATTGTCACTCAGTTCACGCGCAACACC
TCCAATGCGCCGCTTACCACCTGCAATTATCGCGACACCGGCATCGATTG
GGTCGGCAACGCCAACCGCTTCTTTGAGCATCGCCGCCTCGGTAGCTTCG
ACTCTTCTTGTGTCACCGAAGCGTTCGACTCTTCCCTACAGAACGCGTCG
CTGCAACGCAGTTCATCCGACCCCACCGCGTACGAGCCGGAAAACCTGTT
CAGGCTTATCAACGCGTACGGTCAAGGTTTGGACCGAATCTCCAGCCGCC
TTGCACAACTGGCACAACCTCCGCGCTGGGATGATCCGCAGCAGGCCGCG
CGTTCGAACAGTTTTCAGTACGAAGACCGCTCCCAGATGTGCACGCATGA
CTTTGTGGGCTTTGCAAAGGTGAATGGCAAGTGGTATATCAACACTCGCA
TCACGTATAGAGACCCTCTGCTCACGTTGGGGTTCAATGAACGTCTGTAC
ATAAACGAGTTAGATGGCGGTGATCTTGATAACTTTTCGGTACAACCCGT
GACGTTGGTCAAGCCCGGCGCCGCGCGCGAGCCGAAAACCGAGTCGCGCG
ATTTTGAAATCTGGAGGAATGACTCGTGGGTTGTTTCGCGAACCGCCTTT
GAGCAACAAAGCGGCGCTGCGTTTGCTTCTCAGTTTGGCAACATCTTTCC
CACCGATAACCCGGCCATCAACCTGGCGTTGGATCGTGGCAAGCATAGTA
CTGAACTGGCGTTTGATGCCACTACCCCGAGCAATGTTGCAATATTAGCG
CTGCCGCTTGCCATGAATATTGTTCCGGTCGCGCTCATTGCCGATGTGAA
CACGTTTGGAATGCTGGTTTATACATTACTCACCGATGTTCTCACTGCCG
TTCCGCTCGCTATAAAGGGAGTGGAGGTGCTGTTGATTGGGAAGAGGACC
AGGTATGGCGCTGTCGCCCTCATCAGTGGCGGAAACTTGTTTGAAGTCGG
TGACGAACTGCAGAACAAGGCCGCGGAATTTTGGGTGGCTAAATGCAAGC
CAGAGGGGGACTTCATCGTGGCAGGCACCTCTTTACTTGTTGTGGCGCTC
TTCTTCATGGTGGGCGGTATTATCGCCGAGTTCGTCGCCAAGAGATGGGT
GCAGAGGAAGAGACAGTTTGACATGGAAAACTTCGTCAATCAACAGAGTA
TTTCACAGTCGCTTTTGTCACCGCAGGCTGCGGCTTTGGTCATGTCGAAT
GAGAATGCCCGAAACAAACGAGATTGA
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protein sequence of Ggra992.t1

>Ggra992.t1 ID=Ggra992.t1|Name=Ggra992.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=509bp
MNRLSSVVVLILLALCVSWLCCVSLAQLPEPAEPPPRQDVEEGKLILPAD
YTYLYHLLPNASKRTPDLLTYLGYVREHMRQMLTLVHEVDAIVTQFTRNT
SNAPLTTCNYRDTGIDWVGNANRFFEHRRLGSFDSSCVTEAFDSSLQNAS
LQRSSSDPTAYEPENLFRLINAYGQGLDRISSRLAQLAQPPRWDDPQQAA
RSNSFQYEDRSQMCTHDFVGFAKVNGKWYINTRITYRDPLLTLGFNERLY
INELDGGDLDNFSVQPVTLVKPGAAREPKTESRDFEIWRNDSWVVSRTAF
EQQSGAAFASQFGNIFPTDNPAINLALDRGKHSTELAFDATTPSNVAILA
LPLAMNIVPVALIADVNTFGMLVYTLLTDVLTAVPLAIKGVEVLLIGKRT
RYGAVALISGGNLFEVGDELQNKAAEFWVAKCKPEGDFIVAGTSLLVVAL
FFMVGGIIAEFVAKRWVQRKRQFDMENFVNQQSISQSLLSPQAAALVMSN
ENARNKRD*
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mRNA from alignment at tig00000027_pilon:88475..90001-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra992.t1 ID=Ggra992.t1|Name=Ggra992.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1527bp|location=Sequence derived from alignment at tig00000027_pilon:88475..90001- (Gracilaria gracilis GNS1m male)
ATGAATCGTCTCTCGTCCGTCGTCGTCCTCATCCTCCTCGCGCTGTGCGT
GTCGTGGCTGTGCTGCGTGTCGCTCGCGCAGCTGCCCGAGCCGGCGGAGC
CGCCACCCAGGCAGGACGTGGAGGAGGGAAAGCTCATCTTGCCCGCCGAC
TACACCTACTTGTACCATCTGCTGCCAAACGCCTCCAAACGCACGCCGGA
CTTGCTCACCTATCTGGGGTACGTGCGCGAGCACATGCGACAAATGCTCA
CACTGGTGCACGAAGTGGATGCCATTGTCACTCAGTTCACGCGCAACACC
TCCAATGCGCCGCTTACCACCTGCAATTATCGCGACACCGGCATCGATTG
GGTCGGCAACGCCAACCGCTTCTTTGAGCATCGCCGCCTCGGTAGCTTCG
ACTCTTCTTGTGTCACCGAAGCGTTCGACTCTTCCCTACAGAACGCGTCG
CTGCAACGCAGTTCATCCGACCCCACCGCGTACGAGCCGGAAAACCTGTT
CAGGCTTATCAACGCGTACGGTCAAGGTTTGGACCGAATCTCCAGCCGCC
TTGCACAACTGGCACAACCTCCGCGCTGGGATGATCCGCAGCAGGCCGCG
CGTTCGAACAGTTTTCAGTACGAAGACCGCTCCCAGATGTGCACGCATGA
CTTTGTGGGCTTTGCAAAGGTGAATGGCAAGTGGTATATCAACACTCGCA
TCACGTATAGAGACCCTCTGCTCACGTTGGGGTTCAATGAACGTCTGTAC
ATAAACGAGTTAGATGGCGGTGATCTTGATAACTTTTCGGTACAACCCGT
GACGTTGGTCAAGCCCGGCGCCGCGCGCGAGCCGAAAACCGAGTCGCGCG
ATTTTGAAATCTGGAGGAATGACTCGTGGGTTGTTTCGCGAACCGCCTTT
GAGCAACAAAGCGGCGCTGCGTTTGCTTCTCAGTTTGGCAACATCTTTCC
CACCGATAACCCGGCCATCAACCTGGCGTTGGATCGTGGCAAGCATAGTA
CTGAACTGGCGTTTGATGCCACTACCCCGAGCAATGTTGCAATATTAGCG
CTGCCGCTTGCCATGAATATTGTTCCGGTCGCGCTCATTGCCGATGTGAA
CACGTTTGGAATGCTGGTTTATACATTACTCACCGATGTTCTCACTGCCG
TTCCGCTCGCTATAAAGGGAGTGGAGGTGCTGTTGATTGGGAAGAGGACC
AGGTATGGCGCTGTCGCCCTCATCAGTGGCGGAAACTTGTTTGAAGTCGG
TGACGAACTGCAGAACAAGGCCGCGGAATTTTGGGTGGCTAAATGCAAGC
CAGAGGGGGACTTCATCGTGGCAGGCACCTCTTTACTTGTTGTGGCGCTC
TTCTTCATGGTGGGCGGTATTATCGCCGAGTTCGTCGCCAAGAGATGGGT
GCAGAGGAAGAGACAGTTTGACATGGAAAACTTCGTCAATCAACAGAGTA
TTTCACAGTCGCTTTTGTCACCGCAGGCTGCGGCTTTGGTCATGTCGAAT
GAGAATGCCCGAAACAAACGAGATTGA
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Coding sequence (CDS) from alignment at tig00000027_pilon:88475..90001-

>Ggra992.t1 ID=Ggra992.t1|Name=Ggra992.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1527bp|location=Sequence derived from alignment at tig00000027_pilon:88475..90001- (Gracilaria gracilis GNS1m male)
ATGAATCGTCTCTCGTCCGTCGTCGTCCTCATCCTCCTCGCGCTGTGCGT
GTCGTGGCTGTGCTGCGTGTCGCTCGCGCAGCTGCCCGAGCCGGCGGAGC
CGCCACCCAGGCAGGACGTGGAGGAGGGAAAGCTCATCTTGCCCGCCGAC
TACACCTACTTGTACCATCTGCTGCCAAACGCCTCCAAACGCACGCCGGA
CTTGCTCACCTATCTGGGGTACGTGCGCGAGCACATGCGACAAATGCTCA
CACTGGTGCACGAAGTGGATGCCATTGTCACTCAGTTCACGCGCAACACC
TCCAATGCGCCGCTTACCACCTGCAATTATCGCGACACCGGCATCGATTG
GGTCGGCAACGCCAACCGCTTCTTTGAGCATCGCCGCCTCGGTAGCTTCG
ACTCTTCTTGTGTCACCGAAGCGTTCGACTCTTCCCTACAGAACGCGTCG
CTGCAACGCAGTTCATCCGACCCCACCGCGTACGAGCCGGAAAACCTGTT
CAGGCTTATCAACGCGTACGGTCAAGGTTTGGACCGAATCTCCAGCCGCC
TTGCACAACTGGCACAACCTCCGCGCTGGGATGATCCGCAGCAGGCCGCG
CGTTCGAACAGTTTTCAGTACGAAGACCGCTCCCAGATGTGCACGCATGA
CTTTGTGGGCTTTGCAAAGGTGAATGGCAAGTGGTATATCAACACTCGCA
TCACGTATAGAGACCCTCTGCTCACGTTGGGGTTCAATGAACGTCTGTAC
ATAAACGAGTTAGATGGCGGTGATCTTGATAACTTTTCGGTACAACCCGT
GACGTTGGTCAAGCCCGGCGCCGCGCGCGAGCCGAAAACCGAGTCGCGCG
ATTTTGAAATCTGGAGGAATGACTCGTGGGTTGTTTCGCGAACCGCCTTT
GAGCAACAAAGCGGCGCTGCGTTTGCTTCTCAGTTTGGCAACATCTTTCC
CACCGATAACCCGGCCATCAACCTGGCGTTGGATCGTGGCAAGCATAGTA
CTGAACTGGCGTTTGATGCCACTACCCCGAGCAATGTTGCAATATTAGCG
CTGCCGCTTGCCATGAATATTGTTCCGGTCGCGCTCATTGCCGATGTGAA
CACGTTTGGAATGCTGGTTTATACATTACTCACCGATGTTCTCACTGCCG
TTCCGCTCGCTATAAAGGGAGTGGAGGTGCTGTTGATTGGGAAGAGGACC
AGGTATGGCGCTGTCGCCCTCATCAGTGGCGGAAACTTGTTTGAAGTCGG
TGACGAACTGCAGAACAAGGCCGCGGAATTTTGGGTGGCTAAATGCAAGC
CAGAGGGGGACTTCATCGTGGCAGGCACCTCTTTACTTGTTGTGGCGCTC
TTCTTCATGGTGGGCGGTATTATCGCCGAGTTCGTCGCCAAGAGATGGGT
GCAGAGGAAGAGACAGTTTGACATGGAAAACTTCGTCAATCAACAGAGTA
TTTCACAGTCGCTTTTGTCACCGCAGGCTGCGGCTTTGGTCATGTCGAAT
GAGAATGCCCGAAACAAACGAGATTGA
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