Ggra9915.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9915.t1
Unique NameGgra9915.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length210
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000887_piloncontigtig00000887_pilon:81427..82056 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9915Ggra9915Gracilaria gracilis GNS1m malegenetig00000887_pilon 81427..82056 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9915.t1.stop1Ggra9915.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000887_pilon 81427..81429 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9915.t1.CDS1Ggra9915.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000887_pilon 81427..82056 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9915.t1.exon1Ggra9915.t1.exon1Gracilaria gracilis GNS1m maleexontig00000887_pilon 81427..82056 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9915.t1.start1Ggra9915.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000887_pilon 82054..82056 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9915.t1Ggra9915.t1Gracilaria gracilis GNS1m malepolypeptidetig00000887_pilon 81427..82056 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9915.t1 ID=Ggra9915.t1|Name=Ggra9915.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=210bp
MHSPNSAPLRGSENAQAHLSHMFTAIISKLDRDSRENLCHVLHHCHTRLS
PRTHLPIMFFSERDDVTYAIAAPHLSEQQNTVDPPNSKLCQNGQHTWSDA
QHAAIRVLKGAGVPDVYMHNHSYDNQQVQPARRAFLRQREGYSAYAPPSM
NDSDDDHMEDFEDDLSYDSYISDSKMSDVTEEAREYEEHCRTSIFGSEIE
SQVQCSPRH*
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spliced messenger RNA

>Ggra9915.t1 ID=Ggra9915.t1|Name=Ggra9915.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=630bp|location=Sequence derived from alignment at tig00000887_pilon:81427..82056- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCATTCACCCAATTCGGCTCCATTGCGAGGCAGTGAGAATGCTCAAGC
TCATCTTTCTCACATGTTCACCGCAATTATCTCCAAGTTGGACCGCGATT
CGAGAGAGAACCTTTGTCATGTGTTGCACCACTGTCACACACGCCTATCG
CCGCGCACGCATCTCCCCATCATGTTCTTCAGCGAACGCGATGATGTCAC
ATACGCGATTGCGGCCCCGCATCTAAGTGAGCAACAGAACACGGTCGATC
CGCCAAACTCTAAACTCTGTCAGAATGGCCAGCATACTTGGAGTGATGCC
CAACATGCCGCCATTCGCGTTTTGAAAGGGGCTGGTGTGCCTGATGTTTA
TATGCATAATCATTCATATGATAATCAACAGGTACAACCTGCTCGCCGTG
CGTTTCTGAGACAGCGAGAAGGTTACTCTGCATACGCCCCACCGTCTATG
AATGACTCGGATGACGACCATATGGAAGATTTTGAGGACGACCTTTCTTA
CGACTCATATATTTCGGACTCCAAGATGTCTGACGTGACAGAGGAAGCTC
GAGAGTACGAAGAACACTGCAGAACAAGTATTTTCGGCAGCGAAATTGAG
AGTCAAGTACAATGTTCCCCGAGACACTAG
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protein sequence of Ggra9915.t1

>Ggra9915.t1 ID=Ggra9915.t1|Name=Ggra9915.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=210bp
MHSPNSAPLRGSENAQAHLSHMFTAIISKLDRDSRENLCHVLHHCHTRLS
PRTHLPIMFFSERDDVTYAIAAPHLSEQQNTVDPPNSKLCQNGQHTWSDA
QHAAIRVLKGAGVPDVYMHNHSYDNQQVQPARRAFLRQREGYSAYAPPSM
NDSDDDHMEDFEDDLSYDSYISDSKMSDVTEEAREYEEHCRTSIFGSEIE
SQVQCSPRH*
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mRNA from alignment at tig00000887_pilon:81427..82056-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9915.t1 ID=Ggra9915.t1|Name=Ggra9915.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=630bp|location=Sequence derived from alignment at tig00000887_pilon:81427..82056- (Gracilaria gracilis GNS1m male)
ATGCATTCACCCAATTCGGCTCCATTGCGAGGCAGTGAGAATGCTCAAGC
TCATCTTTCTCACATGTTCACCGCAATTATCTCCAAGTTGGACCGCGATT
CGAGAGAGAACCTTTGTCATGTGTTGCACCACTGTCACACACGCCTATCG
CCGCGCACGCATCTCCCCATCATGTTCTTCAGCGAACGCGATGATGTCAC
ATACGCGATTGCGGCCCCGCATCTAAGTGAGCAACAGAACACGGTCGATC
CGCCAAACTCTAAACTCTGTCAGAATGGCCAGCATACTTGGAGTGATGCC
CAACATGCCGCCATTCGCGTTTTGAAAGGGGCTGGTGTGCCTGATGTTTA
TATGCATAATCATTCATATGATAATCAACAGGTACAACCTGCTCGCCGTG
CGTTTCTGAGACAGCGAGAAGGTTACTCTGCATACGCCCCACCGTCTATG
AATGACTCGGATGACGACCATATGGAAGATTTTGAGGACGACCTTTCTTA
CGACTCATATATTTCGGACTCCAAGATGTCTGACGTGACAGAGGAAGCTC
GAGAGTACGAAGAACACTGCAGAACAAGTATTTTCGGCAGCGAAATTGAG
AGTCAAGTACAATGTTCCCCGAGACACTAG
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Coding sequence (CDS) from alignment at tig00000887_pilon:81427..82056-

>Ggra9915.t1 ID=Ggra9915.t1|Name=Ggra9915.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=630bp|location=Sequence derived from alignment at tig00000887_pilon:81427..82056- (Gracilaria gracilis GNS1m male)
ATGCATTCACCCAATTCGGCTCCATTGCGAGGCAGTGAGAATGCTCAAGC
TCATCTTTCTCACATGTTCACCGCAATTATCTCCAAGTTGGACCGCGATT
CGAGAGAGAACCTTTGTCATGTGTTGCACCACTGTCACACACGCCTATCG
CCGCGCACGCATCTCCCCATCATGTTCTTCAGCGAACGCGATGATGTCAC
ATACGCGATTGCGGCCCCGCATCTAAGTGAGCAACAGAACACGGTCGATC
CGCCAAACTCTAAACTCTGTCAGAATGGCCAGCATACTTGGAGTGATGCC
CAACATGCCGCCATTCGCGTTTTGAAAGGGGCTGGTGTGCCTGATGTTTA
TATGCATAATCATTCATATGATAATCAACAGGTACAACCTGCTCGCCGTG
CGTTTCTGAGACAGCGAGAAGGTTACTCTGCATACGCCCCACCGTCTATG
AATGACTCGGATGACGACCATATGGAAGATTTTGAGGACGACCTTTCTTA
CGACTCATATATTTCGGACTCCAAGATGTCTGACGTGACAGAGGAAGCTC
GAGAGTACGAAGAACACTGCAGAACAAGTATTTTCGGCAGCGAAATTGAG
AGTCAAGTACAATGTTCCCCGAGACACTAG
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