Ggra9849.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9849.t1
Unique NameGgra9849.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000170_piloncontigtig00000170_pilon:102335..103069 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9849Ggra9849Gracilaria gracilis GNS1m malegenetig00000170_pilon 102335..103069 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9849.t1.start1Ggra9849.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000170_pilon 102335..102337 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9849.t1.CDS1Ggra9849.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000170_pilon 102335..103069 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9849.t1.exon1Ggra9849.t1.exon1Gracilaria gracilis GNS1m maleexontig00000170_pilon 102335..103069 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9849.t1.stop1Ggra9849.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000170_pilon 103067..103069 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9849.t1Ggra9849.t1Gracilaria gracilis GNS1m malepolypeptidetig00000170_pilon 102335..103069 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9849.t1 ID=Ggra9849.t1|Name=Ggra9849.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=245bp
MKHFADREESVNLEDGHFLMFDTDKYASQYSSHLAPERFAFQFIKIAVCV
CPGRPTSNPRATASIPQAEYMNFVYPLDVYSAAMLSFIRKYDYTEDVDLL
KCSTLWNTPVTFGTAPDDGNGDDEVEEISFHIMENTPVPGTCFNDKDVGS
DVVCFTLLTIGGRRVFELLGYRQIVVLRKDSDAYHFPFVDVEFHCIRKDA
RDLNYPLKGLTDSTGSPIATVGDCVTTEERYIWHSSYMHPYFFE*
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spliced messenger RNA

>Ggra9849.t1 ID=Ggra9849.t1|Name=Ggra9849.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000170_pilon:102335..103069+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAACACTTTGCTGATCGTGAGGAAAGTGTTAATTTAGAAGATGGCCA
TTTTCTCATGTTCGATACAGATAAGTATGCATCGCAGTATAGCTCTCATC
TTGCTCCAGAACGTTTTGCATTCCAATTCATAAAAATTGCGGTCTGTGTT
TGCCCCGGACGACCTACAAGCAATCCGAGGGCTACTGCAAGTATTCCGCA
AGCCGAATATATGAATTTCGTCTATCCTTTGGACGTATATAGCGCTGCTA
TGTTATCATTCATCAGGAAATATGACTACACGGAGGACGTAGATCTGCTG
AAATGCTCTACTTTGTGGAACACTCCTGTAACGTTCGGAACTGCTCCAGA
TGATGGCAATGGTGATGATGAAGTGGAAGAGATTTCTTTTCATATAATGG
AAAATACGCCCGTTCCAGGTACATGTTTCAATGACAAGGACGTCGGGAGT
GATGTCGTCTGCTTTACATTGCTCACAATTGGTGGGAGACGAGTTTTTGA
GTTGTTGGGGTATCGTCAGATTGTGGTCTTGAGGAAAGATTCAGATGCCT
ATCACTTCCCCTTTGTTGATGTCGAATTTCATTGTATCCGAAAAGATGCT
AGGGATCTAAACTATCCGCTGAAAGGTTTGACGGATAGTACTGGATCTCC
TATCGCAACTGTTGGTGACTGTGTCACTACTGAGGAACGATACATATGGC
ATTCATCATATATGCATCCGTACTTCTTTGAATAG
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protein sequence of Ggra9849.t1

>Ggra9849.t1 ID=Ggra9849.t1|Name=Ggra9849.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MKHFADREESVNLEDGHFLMFDTDKYASQYSSHLAPERFAFQFIKIAVCV
CPGRPTSNPRATASIPQAEYMNFVYPLDVYSAAMLSFIRKYDYTEDVDLL
KCSTLWNTPVTFGTAPDDGNGDDEVEEISFHIMENTPVPGTCFNDKDVGS
DVVCFTLLTIGGRRVFELLGYRQIVVLRKDSDAYHFPFVDVEFHCIRKDA
RDLNYPLKGLTDSTGSPIATVGDCVTTEERYIWHSSYMHPYFFE*
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mRNA from alignment at tig00000170_pilon:102335..103069+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9849.t1 ID=Ggra9849.t1|Name=Ggra9849.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=735bp|location=Sequence derived from alignment at tig00000170_pilon:102335..103069+ (Gracilaria gracilis GNS1m male)
ATGAAACACTTTGCTGATCGTGAGGAAAGTGTTAATTTAGAAGATGGCCA
TTTTCTCATGTTCGATACAGATAAGTATGCATCGCAGTATAGCTCTCATC
TTGCTCCAGAACGTTTTGCATTCCAATTCATAAAAATTGCGGTCTGTGTT
TGCCCCGGACGACCTACAAGCAATCCGAGGGCTACTGCAAGTATTCCGCA
AGCCGAATATATGAATTTCGTCTATCCTTTGGACGTATATAGCGCTGCTA
TGTTATCATTCATCAGGAAATATGACTACACGGAGGACGTAGATCTGCTG
AAATGCTCTACTTTGTGGAACACTCCTGTAACGTTCGGAACTGCTCCAGA
TGATGGCAATGGTGATGATGAAGTGGAAGAGATTTCTTTTCATATAATGG
AAAATACGCCCGTTCCAGGTACATGTTTCAATGACAAGGACGTCGGGAGT
GATGTCGTCTGCTTTACATTGCTCACAATTGGTGGGAGACGAGTTTTTGA
GTTGTTGGGGTATCGTCAGATTGTGGTCTTGAGGAAAGATTCAGATGCCT
ATCACTTCCCCTTTGTTGATGTCGAATTTCATTGTATCCGAAAAGATGCT
AGGGATCTAAACTATCCGCTGAAAGGTTTGACGGATAGTACTGGATCTCC
TATCGCAACTGTTGGTGACTGTGTCACTACTGAGGAACGATACATATGGC
ATTCATCATATATGCATCCGTACTTCTTTGAATAG
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Coding sequence (CDS) from alignment at tig00000170_pilon:102335..103069+

>Ggra9849.t1 ID=Ggra9849.t1|Name=Ggra9849.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=735bp|location=Sequence derived from alignment at tig00000170_pilon:102335..103069+ (Gracilaria gracilis GNS1m male)
ATGAAACACTTTGCTGATCGTGAGGAAAGTGTTAATTTAGAAGATGGCCA
TTTTCTCATGTTCGATACAGATAAGTATGCATCGCAGTATAGCTCTCATC
TTGCTCCAGAACGTTTTGCATTCCAATTCATAAAAATTGCGGTCTGTGTT
TGCCCCGGACGACCTACAAGCAATCCGAGGGCTACTGCAAGTATTCCGCA
AGCCGAATATATGAATTTCGTCTATCCTTTGGACGTATATAGCGCTGCTA
TGTTATCATTCATCAGGAAATATGACTACACGGAGGACGTAGATCTGCTG
AAATGCTCTACTTTGTGGAACACTCCTGTAACGTTCGGAACTGCTCCAGA
TGATGGCAATGGTGATGATGAAGTGGAAGAGATTTCTTTTCATATAATGG
AAAATACGCCCGTTCCAGGTACATGTTTCAATGACAAGGACGTCGGGAGT
GATGTCGTCTGCTTTACATTGCTCACAATTGGTGGGAGACGAGTTTTTGA
GTTGTTGGGGTATCGTCAGATTGTGGTCTTGAGGAAAGATTCAGATGCCT
ATCACTTCCCCTTTGTTGATGTCGAATTTCATTGTATCCGAAAAGATGCT
AGGGATCTAAACTATCCGCTGAAAGGTTTGACGGATAGTACTGGATCTCC
TATCGCAACTGTTGGTGACTGTGTCACTACTGAGGAACGATACATATGGC
ATTCATCATATATGCATCCGTACTTCTTTGAATAG
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