Ggra9808.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9808.t1
Unique NameGgra9808.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length217
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000236_piloncontigtig00000236_pilon:59006..59656 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9808Ggra9808Gracilaria gracilis GNS1m malegenetig00000236_pilon 59006..59656 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9808.t1.start1Ggra9808.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000236_pilon 59006..59008 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9808.t1.CDS1Ggra9808.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000236_pilon 59006..59656 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9808.t1.exon1Ggra9808.t1.exon1Gracilaria gracilis GNS1m maleexontig00000236_pilon 59006..59656 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9808.t1.stop1Ggra9808.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000236_pilon 59654..59656 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9808.t1Ggra9808.t1Gracilaria gracilis GNS1m malepolypeptidetig00000236_pilon 59006..59656 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9808.t1 ID=Ggra9808.t1|Name=Ggra9808.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=217bp
MQLDNRALSLQAREQQARRAAAAADARLRDAAAREASLRYSTQQQARLHA
QRRRLTAQQRAMSRAHAAQTARLSARERALREREQALRERESRFDAACDA
RDGELRRREKAAALLTDALLTQRADAQRALASERGAFWAQQRRLSAVVAT
RLEALLAEHDSLRRQFERDAAASSEALRSMANALSQHSTVSTSTSTAAAA
AAAAAAAAADECNHNA*
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spliced messenger RNA

>Ggra9808.t1 ID=Ggra9808.t1|Name=Ggra9808.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=651bp|location=Sequence derived from alignment at tig00000236_pilon:59006..59656+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCTGGACAACCGCGCGCTCTCTCTACAAGCGCGCGAACAACAGGC
GCGGCGCGCCGCCGCCGCGGCCGACGCGCGGCTGCGCGACGCCGCGGCGC
GAGAGGCGTCGCTGCGCTACTCCACGCAGCAGCAGGCGCGGCTGCACGCG
CAGCGGCGCCGACTGACGGCGCAGCAGCGCGCCATGTCGCGCGCGCACGC
GGCGCAGACGGCGCGACTGTCCGCGCGTGAGCGCGCGCTGCGCGAGCGCG
AGCAGGCGCTGCGCGAGCGCGAGAGCCGATTCGACGCCGCGTGCGACGCC
AGAGACGGCGAGCTGCGGCGGCGCGAGAAGGCGGCGGCGCTGCTGACGGA
CGCGCTGCTGACGCAGCGTGCCGACGCGCAGCGCGCGTTGGCAAGCGAAC
GCGGCGCGTTCTGGGCGCAGCAGCGGCGGCTTAGCGCCGTGGTGGCCACG
CGGCTGGAGGCTTTGTTGGCGGAGCACGACTCGTTGCGACGGCAGTTTGA
GCGCGACGCCGCCGCTAGCAGCGAGGCGCTGCGCTCCATGGCCAATGCGC
TGTCGCAGCACTCCACCGTCTCAACGTCAACGTCAACAGCGgctgcggct
gcggctgctgctgctgctgctgctgcAGACGAGTGTAACCACAACGCATA
A
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protein sequence of Ggra9808.t1

>Ggra9808.t1 ID=Ggra9808.t1|Name=Ggra9808.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MQLDNRALSLQAREQQARRAAAAADARLRDAAAREASLRYSTQQQARLHA
QRRRLTAQQRAMSRAHAAQTARLSARERALREREQALRERESRFDAACDA
RDGELRRREKAAALLTDALLTQRADAQRALASERGAFWAQQRRLSAVVAT
RLEALLAEHDSLRRQFERDAAASSEALRSMANALSQHSTVSTSTSTAAAA
AAAAAAAAADECNHNA*
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mRNA from alignment at tig00000236_pilon:59006..59656+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9808.t1 ID=Ggra9808.t1|Name=Ggra9808.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=651bp|location=Sequence derived from alignment at tig00000236_pilon:59006..59656+ (Gracilaria gracilis GNS1m male)
ATGCAGCTGGACAACCGCGCGCTCTCTCTACAAGCGCGCGAACAACAGGC
GCGGCGCGCCGCCGCCGCGGCCGACGCGCGGCTGCGCGACGCCGCGGCGC
GAGAGGCGTCGCTGCGCTACTCCACGCAGCAGCAGGCGCGGCTGCACGCG
CAGCGGCGCCGACTGACGGCGCAGCAGCGCGCCATGTCGCGCGCGCACGC
GGCGCAGACGGCGCGACTGTCCGCGCGTGAGCGCGCGCTGCGCGAGCGCG
AGCAGGCGCTGCGCGAGCGCGAGAGCCGATTCGACGCCGCGTGCGACGCC
AGAGACGGCGAGCTGCGGCGGCGCGAGAAGGCGGCGGCGCTGCTGACGGA
CGCGCTGCTGACGCAGCGTGCCGACGCGCAGCGCGCGTTGGCAAGCGAAC
GCGGCGCGTTCTGGGCGCAGCAGCGGCGGCTTAGCGCCGTGGTGGCCACG
CGGCTGGAGGCTTTGTTGGCGGAGCACGACTCGTTGCGACGGCAGTTTGA
GCGCGACGCCGCCGCTAGCAGCGAGGCGCTGCGCTCCATGGCCAATGCGC
TGTCGCAGCACTCCACCGTCTCAACGTCAACGTCAACAGCGgctgcggct
gcggctgctgctgctgctgctgctgcAGACGAGTGTAACCACAACGCATA
A
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Coding sequence (CDS) from alignment at tig00000236_pilon:59006..59656+

>Ggra9808.t1 ID=Ggra9808.t1|Name=Ggra9808.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=651bp|location=Sequence derived from alignment at tig00000236_pilon:59006..59656+ (Gracilaria gracilis GNS1m male)
ATGCAGCTGGACAACCGCGCGCTCTCTCTACAAGCGCGCGAACAACAGGC
GCGGCGCGCCGCCGCCGCGGCCGACGCGCGGCTGCGCGACGCCGCGGCGC
GAGAGGCGTCGCTGCGCTACTCCACGCAGCAGCAGGCGCGGCTGCACGCG
CAGCGGCGCCGACTGACGGCGCAGCAGCGCGCCATGTCGCGCGCGCACGC
GGCGCAGACGGCGCGACTGTCCGCGCGTGAGCGCGCGCTGCGCGAGCGCG
AGCAGGCGCTGCGCGAGCGCGAGAGCCGATTCGACGCCGCGTGCGACGCC
AGAGACGGCGAGCTGCGGCGGCGCGAGAAGGCGGCGGCGCTGCTGACGGA
CGCGCTGCTGACGCAGCGTGCCGACGCGCAGCGCGCGTTGGCAAGCGAAC
GCGGCGCGTTCTGGGCGCAGCAGCGGCGGCTTAGCGCCGTGGTGGCCACG
CGGCTGGAGGCTTTGTTGGCGGAGCACGACTCGTTGCGACGGCAGTTTGA
GCGCGACGCCGCCGCTAGCAGCGAGGCGCTGCGCTCCATGGCCAATGCGC
TGTCGCAGCACTCCACCGTCTCAACGTCAACGTCAACAGCGgctgcggct
gcggctgctgctgctgctgctgctgcAGACGAGTGTAACCACAACGCATA
A
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