Ggra9381.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9381.t1
Unique NameGgra9381.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length107
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:232528..232848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9381Ggra9381Gracilaria gracilis GNS1m malegenetig00000883_pilon 232528..232848 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9381.t1.stop1Ggra9381.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000883_pilon 232528..232530 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9381.t1.CDS1Ggra9381.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000883_pilon 232528..232848 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9381.t1.exon1Ggra9381.t1.exon1Gracilaria gracilis GNS1m maleexontig00000883_pilon 232528..232848 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9381.t1.start1Ggra9381.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000883_pilon 232846..232848 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9381.t1Ggra9381.t1Gracilaria gracilis GNS1m malepolypeptidetig00000883_pilon 232528..232848 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9381.t1 ID=Ggra9381.t1|Name=Ggra9381.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=107bp
MGENCTILELKGLRTKDCHLMGIEEMLCIGSALNESTIKMRKMVFTDRVH
AIAIVLNYLMEGNEGATPLNKDPKEVIKILKESQIFGDVPERQYFRFARV
GSTTPQ*
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spliced messenger RNA

>Ggra9381.t1 ID=Ggra9381.t1|Name=Ggra9381.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=321bp|location=Sequence derived from alignment at tig00000883_pilon:232528..232848- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGAAAACTGCACGATACTGGAGCTGAAAGGTCTTCGAACGAAGGA
TTGCCATCTAATGGGTATAGAAGAAATGCTATGTATTGGTTCTGCTTTGA
ACGAGTCAACGATTAAAATGCGGAAGATGGTGTTTACGGACAGGGTACAT
GCCATCGCAATCGTTTTAAACTATCTCATGGAGGGTAATGAGGGCGCGAC
TCCGTTGAATAAAGATCCAAAGGAGGTCATAAAAATCTTGAAAGAAAGTC
AAATCTTTGGTGATGTACCAGAACGCCAGTACTTTCGGTTCGCTAGAGTT
GGCTCTACAACTCCTCAGTAA
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protein sequence of Ggra9381.t1

>Ggra9381.t1 ID=Ggra9381.t1|Name=Ggra9381.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=107bp
MGENCTILELKGLRTKDCHLMGIEEMLCIGSALNESTIKMRKMVFTDRVH
AIAIVLNYLMEGNEGATPLNKDPKEVIKILKESQIFGDVPERQYFRFARV
GSTTPQ*
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mRNA from alignment at tig00000883_pilon:232528..232848-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9381.t1 ID=Ggra9381.t1|Name=Ggra9381.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=321bp|location=Sequence derived from alignment at tig00000883_pilon:232528..232848- (Gracilaria gracilis GNS1m male)
ATGGGTGAAAACTGCACGATACTGGAGCTGAAAGGTCTTCGAACGAAGGA
TTGCCATCTAATGGGTATAGAAGAAATGCTATGTATTGGTTCTGCTTTGA
ACGAGTCAACGATTAAAATGCGGAAGATGGTGTTTACGGACAGGGTACAT
GCCATCGCAATCGTTTTAAACTATCTCATGGAGGGTAATGAGGGCGCGAC
TCCGTTGAATAAAGATCCAAAGGAGGTCATAAAAATCTTGAAAGAAAGTC
AAATCTTTGGTGATGTACCAGAACGCCAGTACTTTCGGTTCGCTAGAGTT
GGCTCTACAACTCCTCAGTAA
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Coding sequence (CDS) from alignment at tig00000883_pilon:232528..232848-

>Ggra9381.t1 ID=Ggra9381.t1|Name=Ggra9381.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=321bp|location=Sequence derived from alignment at tig00000883_pilon:232528..232848- (Gracilaria gracilis GNS1m male)
ATGGGTGAAAACTGCACGATACTGGAGCTGAAAGGTCTTCGAACGAAGGA
TTGCCATCTAATGGGTATAGAAGAAATGCTATGTATTGGTTCTGCTTTGA
ACGAGTCAACGATTAAAATGCGGAAGATGGTGTTTACGGACAGGGTACAT
GCCATCGCAATCGTTTTAAACTATCTCATGGAGGGTAATGAGGGCGCGAC
TCCGTTGAATAAAGATCCAAAGGAGGTCATAAAAATCTTGAAAGAAAGTC
AAATCTTTGGTGATGTACCAGAACGCCAGTACTTTCGGTTCGCTAGAGTT
GGCTCTACAACTCCTCAGTAA
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