Ggra9373.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9373.t1
Unique NameGgra9373.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length381
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:117275..118417 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog72019.SARC_13156T0
PFAMsADH_N,ADH_zinc_N
Max annot lvl33154|Opisthokonta
Evalue5.4e-79
EggNOG OGsCOG1064@1|root,KOG0023@2759|Eukaryota,38EJ7@33154|Opisthokonta
Descriptionalcohol dehydrogenase (NADP ) activity
COG categoryQ
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9373Ggra9373Gracilaria gracilis GNS1m malegenetig00000883_pilon 117275..118417 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9373.t1.stop1Ggra9373.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000883_pilon 117275..117277 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9373.t1.CDS1Ggra9373.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000883_pilon 117275..118417 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9373.t1.exon1Ggra9373.t1.exon1Gracilaria gracilis GNS1m maleexontig00000883_pilon 117275..118417 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9373.t1.start1Ggra9373.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000883_pilon 118415..118417 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9373.t1Ggra9373.t1Gracilaria gracilis GNS1m malepolypeptidetig00000883_pilon 117275..118417 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9373.t1 ID=Ggra9373.t1|Name=Ggra9373.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=381bp
MGHHCTEVTGKAQHGEDLGPLITEGYVVNEKGGKLSLQEVRLPPMSATMV
QVKIDMVGLCHSDIHMRDNDFEISDYPLLAGHEGVGTITHAGSRVKSLKV
GDSVGIGWMRDSCSYCRYCREGRENICEKGYQGLFLSTKAGMFGSSSVEY
NRHGGCFARYQRIEERFAVKMPSGISPELFCPLVCAGATVYEPLCDYSSV
GMNVGVMGIGGLGTCAIKLARLRGCFVWALSGTESKREGALAAGAHNFIN
MKNEEDRSKALGQLDLILDTTPSNTQVMSLLPLLRVKGTFCKLGVPLATD
SGFSADWRPLIFLQKRVVGSGVSGTKHTAEMLNLVAANLEFMQDTDAWKS
ERISMSKVNEAMDELQSGTNKAYRYIMEWD*
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spliced messenger RNA

>Ggra9373.t1 ID=Ggra9373.t1|Name=Ggra9373.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1143bp|location=Sequence derived from alignment at tig00000883_pilon:117275..118417- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGACATCATTGCACTGAGGTCACCGGAAAGGCGCAACATGGAGAAGA
TTTGGGACCGCTGATCACTGAAGGATACGTAGTGAATGAAAAGGGAGGGA
AACTTTCTCTGCAAGAAGTTAGGTTGCCGCCAATGAGTGCAACAATGGTC
CAAGTGAAAATCGATATGGTCGGGTTATGTCACAGTGATATCCATATGCG
AGACAATGACTTTGAGATTTCCGATTATCCTCTACTAGCGGGTCACGAAG
GTGTTGGGACTATCACTCACGCGGGATCAAGAGTGAAAAGCTTGAAGGTT
GGCGATAGTGTAGGTATCGGCTGGATGCGAGATTCCTGTTCTTATTGCAG
GTATTGTAGGGAGGGGCGGGAAAACATATGCGAGAAAGGGTATCAGGGCT
TGTTTTTGTCCACCAAAGCTGGCATGTTCGGTTCATCTTCTGTGGAGTAT
AATCGTCATGGCGGTTGCTTTGCGCGCTACCAGAGAATAGAGGAGAGGTT
TGCTGTCAAGATGCCAAGTGGTATTAGTCCTGAACTTTTTTGTCCTCTCG
TTTGTGCAGGAGCCACTGTTTACGAACCATTGTGTGACTATTCTTCTGTC
GGAATGAACGTTGGAGTGATGGGAATCGGAGGACTCGGAACATGTGCTAT
CAAACTAGCTCGGTTGAGAGGATGTTTCGTTTGGGCTTTGAGTGGAACCG
AGTCGAAAAGAGAGGGTGCGCTGGCAGCTGGGGCTCATAACTTCATAAAT
ATGAAGAATGAGGAGGATCGCTCTAAAGCCTTGGGACAACTAGACCTCAT
CCTTGATACAACTCCTTCGAACACACAGGTAATGTCACTCTTACCGCTTC
TGCGGGTCAAGGGCACGTTTTGCAAGCTTGGAGTGCCATTGGCGACAGAC
AGTGGTTTTTCCGCTGACTGGAGACCCTTAATCTTTTTGCAAAAGAGAGT
CGTAGGCAGCGGTGTAAGTGGTACGAAACATACAGCCGAAATGCTCAACT
TGGTTGCTGCCAATTTGGAGTTTATGCAAGATACGGATGCATGGAAGTCT
GAACGCATTTCTATGTCGAAAGTTAACGAAGCGATGGATGAGTTGCAGAG
CGGTACGAATAAGGCATATAGATATATTATGGAATGGGATTAA
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protein sequence of Ggra9373.t1

>Ggra9373.t1 ID=Ggra9373.t1|Name=Ggra9373.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=381bp
MGHHCTEVTGKAQHGEDLGPLITEGYVVNEKGGKLSLQEVRLPPMSATMV
QVKIDMVGLCHSDIHMRDNDFEISDYPLLAGHEGVGTITHAGSRVKSLKV
GDSVGIGWMRDSCSYCRYCREGRENICEKGYQGLFLSTKAGMFGSSSVEY
NRHGGCFARYQRIEERFAVKMPSGISPELFCPLVCAGATVYEPLCDYSSV
GMNVGVMGIGGLGTCAIKLARLRGCFVWALSGTESKREGALAAGAHNFIN
MKNEEDRSKALGQLDLILDTTPSNTQVMSLLPLLRVKGTFCKLGVPLATD
SGFSADWRPLIFLQKRVVGSGVSGTKHTAEMLNLVAANLEFMQDTDAWKS
ERISMSKVNEAMDELQSGTNKAYRYIMEWD*
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mRNA from alignment at tig00000883_pilon:117275..118417-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9373.t1 ID=Ggra9373.t1|Name=Ggra9373.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1143bp|location=Sequence derived from alignment at tig00000883_pilon:117275..118417- (Gracilaria gracilis GNS1m male)
ATGGGACATCATTGCACTGAGGTCACCGGAAAGGCGCAACATGGAGAAGA
TTTGGGACCGCTGATCACTGAAGGATACGTAGTGAATGAAAAGGGAGGGA
AACTTTCTCTGCAAGAAGTTAGGTTGCCGCCAATGAGTGCAACAATGGTC
CAAGTGAAAATCGATATGGTCGGGTTATGTCACAGTGATATCCATATGCG
AGACAATGACTTTGAGATTTCCGATTATCCTCTACTAGCGGGTCACGAAG
GTGTTGGGACTATCACTCACGCGGGATCAAGAGTGAAAAGCTTGAAGGTT
GGCGATAGTGTAGGTATCGGCTGGATGCGAGATTCCTGTTCTTATTGCAG
GTATTGTAGGGAGGGGCGGGAAAACATATGCGAGAAAGGGTATCAGGGCT
TGTTTTTGTCCACCAAAGCTGGCATGTTCGGTTCATCTTCTGTGGAGTAT
AATCGTCATGGCGGTTGCTTTGCGCGCTACCAGAGAATAGAGGAGAGGTT
TGCTGTCAAGATGCCAAGTGGTATTAGTCCTGAACTTTTTTGTCCTCTCG
TTTGTGCAGGAGCCACTGTTTACGAACCATTGTGTGACTATTCTTCTGTC
GGAATGAACGTTGGAGTGATGGGAATCGGAGGACTCGGAACATGTGCTAT
CAAACTAGCTCGGTTGAGAGGATGTTTCGTTTGGGCTTTGAGTGGAACCG
AGTCGAAAAGAGAGGGTGCGCTGGCAGCTGGGGCTCATAACTTCATAAAT
ATGAAGAATGAGGAGGATCGCTCTAAAGCCTTGGGACAACTAGACCTCAT
CCTTGATACAACTCCTTCGAACACACAGGTAATGTCACTCTTACCGCTTC
TGCGGGTCAAGGGCACGTTTTGCAAGCTTGGAGTGCCATTGGCGACAGAC
AGTGGTTTTTCCGCTGACTGGAGACCCTTAATCTTTTTGCAAAAGAGAGT
CGTAGGCAGCGGTGTAAGTGGTACGAAACATACAGCCGAAATGCTCAACT
TGGTTGCTGCCAATTTGGAGTTTATGCAAGATACGGATGCATGGAAGTCT
GAACGCATTTCTATGTCGAAAGTTAACGAAGCGATGGATGAGTTGCAGAG
CGGTACGAATAAGGCATATAGATATATTATGGAATGGGATTAA
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Coding sequence (CDS) from alignment at tig00000883_pilon:117275..118417-

>Ggra9373.t1 ID=Ggra9373.t1|Name=Ggra9373.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1143bp|location=Sequence derived from alignment at tig00000883_pilon:117275..118417- (Gracilaria gracilis GNS1m male)
ATGGGACATCATTGCACTGAGGTCACCGGAAAGGCGCAACATGGAGAAGA
TTTGGGACCGCTGATCACTGAAGGATACGTAGTGAATGAAAAGGGAGGGA
AACTTTCTCTGCAAGAAGTTAGGTTGCCGCCAATGAGTGCAACAATGGTC
CAAGTGAAAATCGATATGGTCGGGTTATGTCACAGTGATATCCATATGCG
AGACAATGACTTTGAGATTTCCGATTATCCTCTACTAGCGGGTCACGAAG
GTGTTGGGACTATCACTCACGCGGGATCAAGAGTGAAAAGCTTGAAGGTT
GGCGATAGTGTAGGTATCGGCTGGATGCGAGATTCCTGTTCTTATTGCAG
GTATTGTAGGGAGGGGCGGGAAAACATATGCGAGAAAGGGTATCAGGGCT
TGTTTTTGTCCACCAAAGCTGGCATGTTCGGTTCATCTTCTGTGGAGTAT
AATCGTCATGGCGGTTGCTTTGCGCGCTACCAGAGAATAGAGGAGAGGTT
TGCTGTCAAGATGCCAAGTGGTATTAGTCCTGAACTTTTTTGTCCTCTCG
TTTGTGCAGGAGCCACTGTTTACGAACCATTGTGTGACTATTCTTCTGTC
GGAATGAACGTTGGAGTGATGGGAATCGGAGGACTCGGAACATGTGCTAT
CAAACTAGCTCGGTTGAGAGGATGTTTCGTTTGGGCTTTGAGTGGAACCG
AGTCGAAAAGAGAGGGTGCGCTGGCAGCTGGGGCTCATAACTTCATAAAT
ATGAAGAATGAGGAGGATCGCTCTAAAGCCTTGGGACAACTAGACCTCAT
CCTTGATACAACTCCTTCGAACACACAGGTAATGTCACTCTTACCGCTTC
TGCGGGTCAAGGGCACGTTTTGCAAGCTTGGAGTGCCATTGGCGACAGAC
AGTGGTTTTTCCGCTGACTGGAGACCCTTAATCTTTTTGCAAAAGAGAGT
CGTAGGCAGCGGTGTAAGTGGTACGAAACATACAGCCGAAATGCTCAACT
TGGTTGCTGCCAATTTGGAGTTTATGCAAGATACGGATGCATGGAAGTCT
GAACGCATTTCTATGTCGAAAGTTAACGAAGCGATGGATGAGTTGCAGAG
CGGTACGAATAAGGCATATAGATATATTATGGAATGGGATTAA
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