Ggra9369.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9369.t1
Unique NameGgra9369.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length452
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:110251..111606 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog72019.SARC_08990T0
PFAMsRubis-subs-bind,SET
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K19199
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,map00310
Evalue2.6e-18
EggNOG OGsKOG1337@1|root,KOG1337@2759|Eukaryota
EC2.1.1.43
Descriptionpeptidyl-lysine monomethylation
COG categoryI
BRITEko00000,ko00001,ko01000,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9369Ggra9369Gracilaria gracilis GNS1m malegenetig00000883_pilon 110251..111606 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9369.t1.start1Ggra9369.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000883_pilon 110251..110253 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9369.t1.CDS1Ggra9369.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000883_pilon 110251..111606 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9369.t1.exon1Ggra9369.t1.exon1Gracilaria gracilis GNS1m maleexontig00000883_pilon 110251..111606 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9369.t1.stop1Ggra9369.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000883_pilon 111604..111606 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9369.t1Ggra9369.t1Gracilaria gracilis GNS1m malepolypeptidetig00000883_pilon 110251..111606 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9369.t1 ID=Ggra9369.t1|Name=Ggra9369.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=452bp
MVRPPQPAHQVALVSLRDWLRSSGALLNLRINANSPNSRSLHASTLVPES
TPVLRIPPTHLITTQIAAQAYPIPDIMRAARHAKLHERIPDAVGDNAHLL
LFVMLQLADARSSFYGPWLRSLPAVFHTPFALPFERVKDLLYDTPVFPLI
VKLREELLEMFHDWFLPFAVRAYPQCFPPQVCTFELFQYAHCVIETRAFR
IDSLTLLAPFADMANHAPTDSNACNAKVRGYAFEDDTSRLGLEMYATRDI
PIDEQVCISYGKLKNWELLLHYGFALLHNPSDGIEVSLQSPEETVVATTL
ILHLALGYTDMDFTLTLADPLPKEMLIGLRIMLLDDTERSRAASTDFTVM
VSHRNERHVIGYLRTLLDALHIPRVFEGAHDDFTKFCANYITSHMQILDA
CTKRVDDMERAFGQHQEQSAAALASAITSSTNSITRTSNSSAPNHHPSNS
R*
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spliced messenger RNA

>Ggra9369.t1 ID=Ggra9369.t1|Name=Ggra9369.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1356bp|location=Sequence derived from alignment at tig00000883_pilon:110251..111606+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTCGTCCACCGCAGCCCGCTCATCAGGTCGCCCTGGTTTCGTTGCG
CGATTGGCTTCGCTCATCTGGCGCGCTTTTGAACCTCCGCATCAACGCCA
ACTCCCCCAATTCCCGATCTCTTCACGCATCCACGCTTGTCCCAGAGTCC
ACCCCCGTTCTACGCATTCCGCCAACCCACCTCATCACCACTCAAATCGC
TGCCCAAGCATATCCCATCCCAGACATCATGCGTGCCGCAAGGCACGCAA
AGTTGCACGAGAGAATCCCCGATGCTGTGGGAGACAATGCACACCTTCTA
CTGTTCGTTATGTTGCAACTGGCCGATGCTAGATCTTCGTTCTACGGCCC
GTGGTTGCGATCTTTGCCAGCCGTGTTTCATACTCCGTTCGCATTGCCGT
TTGAACGCGTCAAGGACCTGCTCTATGACACGCCAGTGTTCCCACTAATC
GTCAAGTTACGTGAAGAACTGCTAGAAATGTTCCATGATTGGTTTCTTCC
GTTCGCTGTCAGAGCATATCCACAATGCTTTCCGCCGCAGGTATGCACCT
TTGAATTGTTTCAATATGCACACTGTGTCATCGAAACTCGAGCGTTTCGG
ATCGACTCGCTCACCTTGTTGGCCCCTTTTGCTGACATGGCCAATCATGC
ACCCACCGACTCGAACGCTTGTAACGCAAAGGTACGTGGCTATGCCTTTG
AGGACGATACTTCTCGTCTGGGACTGGAAATGTACGCCACAAGAGATATT
CCCATCGACGAGCAGGTCTGTATCTCGTACGGCAAACTCAAGAACTGGGA
ATTGCTACTGCACTACGGTTTTGCATTGTTGCACAACCCTAGCGACGGCA
TTGAGGTATCTTTGCAATCTCCTGAAGAGACAGTGGTAGCCACAACTTTG
ATCCTCCACTTGGCCCTAGGCTACACCGACATGGACTTCACCCTTACTCT
TGCGGACCCGCTACCCAAAGAAATGCTCATCGGTCTGAGGATTATGCTGT
TGGATGATACGGAAAGATCCCGTGCCGCTTCAACCGATTTCACCGTCATG
GTGTCGCATAGAAACGAACGACATGTGATTGGCTATCTGCGCACACTTTT
GGATGCTCTGCATATCCCTCGTGTATTCGAGGGTGCTCATGATGACTTCA
CCAAGTTTTGTGCCAACTACATAACTTCTCACATGCAAATTCTTGACGCA
TGTACGAAACGAGTGGATGATATGGAAAGAGCTTTTGGGCAACATCAAGA
ACAAAGCGCTGCAGCTCTGGCGTCAGCTATTACTAGCAGCACGAATTCCA
TCACCCGTACATCTAATTCCTCTGCACCAAATCATCACCCGTCGAACTCG
AGATAA
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protein sequence of Ggra9369.t1

>Ggra9369.t1 ID=Ggra9369.t1|Name=Ggra9369.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=452bp
MVRPPQPAHQVALVSLRDWLRSSGALLNLRINANSPNSRSLHASTLVPES
TPVLRIPPTHLITTQIAAQAYPIPDIMRAARHAKLHERIPDAVGDNAHLL
LFVMLQLADARSSFYGPWLRSLPAVFHTPFALPFERVKDLLYDTPVFPLI
VKLREELLEMFHDWFLPFAVRAYPQCFPPQVCTFELFQYAHCVIETRAFR
IDSLTLLAPFADMANHAPTDSNACNAKVRGYAFEDDTSRLGLEMYATRDI
PIDEQVCISYGKLKNWELLLHYGFALLHNPSDGIEVSLQSPEETVVATTL
ILHLALGYTDMDFTLTLADPLPKEMLIGLRIMLLDDTERSRAASTDFTVM
VSHRNERHVIGYLRTLLDALHIPRVFEGAHDDFTKFCANYITSHMQILDA
CTKRVDDMERAFGQHQEQSAAALASAITSSTNSITRTSNSSAPNHHPSNS
R*
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mRNA from alignment at tig00000883_pilon:110251..111606+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9369.t1 ID=Ggra9369.t1|Name=Ggra9369.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1356bp|location=Sequence derived from alignment at tig00000883_pilon:110251..111606+ (Gracilaria gracilis GNS1m male)
ATGGTTCGTCCACCGCAGCCCGCTCATCAGGTCGCCCTGGTTTCGTTGCG
CGATTGGCTTCGCTCATCTGGCGCGCTTTTGAACCTCCGCATCAACGCCA
ACTCCCCCAATTCCCGATCTCTTCACGCATCCACGCTTGTCCCAGAGTCC
ACCCCCGTTCTACGCATTCCGCCAACCCACCTCATCACCACTCAAATCGC
TGCCCAAGCATATCCCATCCCAGACATCATGCGTGCCGCAAGGCACGCAA
AGTTGCACGAGAGAATCCCCGATGCTGTGGGAGACAATGCACACCTTCTA
CTGTTCGTTATGTTGCAACTGGCCGATGCTAGATCTTCGTTCTACGGCCC
GTGGTTGCGATCTTTGCCAGCCGTGTTTCATACTCCGTTCGCATTGCCGT
TTGAACGCGTCAAGGACCTGCTCTATGACACGCCAGTGTTCCCACTAATC
GTCAAGTTACGTGAAGAACTGCTAGAAATGTTCCATGATTGGTTTCTTCC
GTTCGCTGTCAGAGCATATCCACAATGCTTTCCGCCGCAGGTATGCACCT
TTGAATTGTTTCAATATGCACACTGTGTCATCGAAACTCGAGCGTTTCGG
ATCGACTCGCTCACCTTGTTGGCCCCTTTTGCTGACATGGCCAATCATGC
ACCCACCGACTCGAACGCTTGTAACGCAAAGGTACGTGGCTATGCCTTTG
AGGACGATACTTCTCGTCTGGGACTGGAAATGTACGCCACAAGAGATATT
CCCATCGACGAGCAGGTCTGTATCTCGTACGGCAAACTCAAGAACTGGGA
ATTGCTACTGCACTACGGTTTTGCATTGTTGCACAACCCTAGCGACGGCA
TTGAGGTATCTTTGCAATCTCCTGAAGAGACAGTGGTAGCCACAACTTTG
ATCCTCCACTTGGCCCTAGGCTACACCGACATGGACTTCACCCTTACTCT
TGCGGACCCGCTACCCAAAGAAATGCTCATCGGTCTGAGGATTATGCTGT
TGGATGATACGGAAAGATCCCGTGCCGCTTCAACCGATTTCACCGTCATG
GTGTCGCATAGAAACGAACGACATGTGATTGGCTATCTGCGCACACTTTT
GGATGCTCTGCATATCCCTCGTGTATTCGAGGGTGCTCATGATGACTTCA
CCAAGTTTTGTGCCAACTACATAACTTCTCACATGCAAATTCTTGACGCA
TGTACGAAACGAGTGGATGATATGGAAAGAGCTTTTGGGCAACATCAAGA
ACAAAGCGCTGCAGCTCTGGCGTCAGCTATTACTAGCAGCACGAATTCCA
TCACCCGTACATCTAATTCCTCTGCACCAAATCATCACCCGTCGAACTCG
AGATAA
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Coding sequence (CDS) from alignment at tig00000883_pilon:110251..111606+

>Ggra9369.t1 ID=Ggra9369.t1|Name=Ggra9369.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1356bp|location=Sequence derived from alignment at tig00000883_pilon:110251..111606+ (Gracilaria gracilis GNS1m male)
ATGGTTCGTCCACCGCAGCCCGCTCATCAGGTCGCCCTGGTTTCGTTGCG
CGATTGGCTTCGCTCATCTGGCGCGCTTTTGAACCTCCGCATCAACGCCA
ACTCCCCCAATTCCCGATCTCTTCACGCATCCACGCTTGTCCCAGAGTCC
ACCCCCGTTCTACGCATTCCGCCAACCCACCTCATCACCACTCAAATCGC
TGCCCAAGCATATCCCATCCCAGACATCATGCGTGCCGCAAGGCACGCAA
AGTTGCACGAGAGAATCCCCGATGCTGTGGGAGACAATGCACACCTTCTA
CTGTTCGTTATGTTGCAACTGGCCGATGCTAGATCTTCGTTCTACGGCCC
GTGGTTGCGATCTTTGCCAGCCGTGTTTCATACTCCGTTCGCATTGCCGT
TTGAACGCGTCAAGGACCTGCTCTATGACACGCCAGTGTTCCCACTAATC
GTCAAGTTACGTGAAGAACTGCTAGAAATGTTCCATGATTGGTTTCTTCC
GTTCGCTGTCAGAGCATATCCACAATGCTTTCCGCCGCAGGTATGCACCT
TTGAATTGTTTCAATATGCACACTGTGTCATCGAAACTCGAGCGTTTCGG
ATCGACTCGCTCACCTTGTTGGCCCCTTTTGCTGACATGGCCAATCATGC
ACCCACCGACTCGAACGCTTGTAACGCAAAGGTACGTGGCTATGCCTTTG
AGGACGATACTTCTCGTCTGGGACTGGAAATGTACGCCACAAGAGATATT
CCCATCGACGAGCAGGTCTGTATCTCGTACGGCAAACTCAAGAACTGGGA
ATTGCTACTGCACTACGGTTTTGCATTGTTGCACAACCCTAGCGACGGCA
TTGAGGTATCTTTGCAATCTCCTGAAGAGACAGTGGTAGCCACAACTTTG
ATCCTCCACTTGGCCCTAGGCTACACCGACATGGACTTCACCCTTACTCT
TGCGGACCCGCTACCCAAAGAAATGCTCATCGGTCTGAGGATTATGCTGT
TGGATGATACGGAAAGATCCCGTGCCGCTTCAACCGATTTCACCGTCATG
GTGTCGCATAGAAACGAACGACATGTGATTGGCTATCTGCGCACACTTTT
GGATGCTCTGCATATCCCTCGTGTATTCGAGGGTGCTCATGATGACTTCA
CCAAGTTTTGTGCCAACTACATAACTTCTCACATGCAAATTCTTGACGCA
TGTACGAAACGAGTGGATGATATGGAAAGAGCTTTTGGGCAACATCAAGA
ACAAAGCGCTGCAGCTCTGGCGTCAGCTATTACTAGCAGCACGAATTCCA
TCACCCGTACATCTAATTCCTCTGCACCAAATCATCACCCGTCGAACTCG
AGATAA
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