Ggra9341.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9341.t1
Unique NameGgra9341.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:35568..36326 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9341Ggra9341Gracilaria gracilis GNS1m malegenetig00000883_pilon 35568..36326 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9341.t1.start1Ggra9341.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000883_pilon 35568..35570 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9341.t1.CDS1Ggra9341.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000883_pilon 35568..36326 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9341.t1.exon1Ggra9341.t1.exon1Gracilaria gracilis GNS1m maleexontig00000883_pilon 35568..36326 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9341.t1.stop1Ggra9341.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000883_pilon 36324..36326 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9341.t1Ggra9341.t1Gracilaria gracilis GNS1m malepolypeptidetig00000883_pilon 35568..36326 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9341.t1 ID=Ggra9341.t1|Name=Ggra9341.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=253bp
MAGKSKRPPRANSSSSPTPGARRRSPHAAHSPLAAKLDLDSAFFWLLLAF
LLTAFTFLSLRDTHLSLNTAQLAEYERRSQFLSNSTVYIVEVGRPEALLN
VLSKHDWKRISADIDLVAFVWDDLPVFLTDGWVHAAETILKPTVPHANIS
LVLFQCGCVLPASYFTLVEHRLAGFECVLLPGWVLDASHVHWLDVQEGDA
CKRRDAVLKSRLARRYRAELSEIHRIVVDHNERVEREAANGTAVEKELTN
DR*
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spliced messenger RNA

>Ggra9341.t1 ID=Ggra9341.t1|Name=Ggra9341.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000883_pilon:35568..36326+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGGCAAGTCGAAGCGAccgccgcgcgcaaactcgtcgtcgtcgcc
gacgccgggcgcgcgccgccgctcgccgcacgccgcgcacagcccgctcg
cagccAAGCTCGACCTGGACTCGGCGTTCTTCTGGCTGCTGCTGGCGTTT
TTGCTCACCGCGTTCACGTTCCTGTCGTTGAGGGACACGCACCTGTCTTT
GAACACGGCGCAGCTGGCCGAGTACGAGCGGCGATCACAGTTTCTGTCCA
ACTCCACTGTGTACATCGTGGAGGTGGGGCGGCCGGAGGCGTTGTTGAAC
GTGCTGTCCAAGCACGATTGGAAGCGGATAAGCGCCGATATTGACTTGGT
AGCGTTCGTGTGGGATGATCTGCCCGTGTTTTTGACCGACGGCTGGGTGC
ATGCGGCGGAGACCATCCTCAAACCAACCGTGCCGCACGCCAACATTTCG
CTGGTGCTGTTTCAATGCGGCTGCGTGTTGCCGGCGTCGTACTTCACGTT
GGTGGAACATCGACTGGCGGGCTTTGAGTGCGTGCTGCTACCGGGCTGGG
TGCTGGATGCTTCGCACGTGCATTGGCTGGACGTGCAGGAGGGCGATGCG
TGTAAACGACGTGACGCCGTGCTCAAGTCTAGACTTGCCAGACGTTATCG
CGCGGAGCTTTCGGAGATTCATCGTATTGTGGTGGATCATAATGAGCGCG
TGGAGCGCGAGGCGGCTAATGGAACCGCCGTTGAGAAGGAGCTGACGAAT
GACAGGTAG
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protein sequence of Ggra9341.t1

>Ggra9341.t1 ID=Ggra9341.t1|Name=Ggra9341.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MAGKSKRPPRANSSSSPTPGARRRSPHAAHSPLAAKLDLDSAFFWLLLAF
LLTAFTFLSLRDTHLSLNTAQLAEYERRSQFLSNSTVYIVEVGRPEALLN
VLSKHDWKRISADIDLVAFVWDDLPVFLTDGWVHAAETILKPTVPHANIS
LVLFQCGCVLPASYFTLVEHRLAGFECVLLPGWVLDASHVHWLDVQEGDA
CKRRDAVLKSRLARRYRAELSEIHRIVVDHNERVEREAANGTAVEKELTN
DR*
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mRNA from alignment at tig00000883_pilon:35568..36326+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9341.t1 ID=Ggra9341.t1|Name=Ggra9341.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=759bp|location=Sequence derived from alignment at tig00000883_pilon:35568..36326+ (Gracilaria gracilis GNS1m male)
ATGGCGGGCAAGTCGAAGCGAccgccgcgcgcaaactcgtcgtcgtcgcc
gacgccgggcgcgcgccgccgctcgccgcacgccgcgcacagcccgctcg
cagccAAGCTCGACCTGGACTCGGCGTTCTTCTGGCTGCTGCTGGCGTTT
TTGCTCACCGCGTTCACGTTCCTGTCGTTGAGGGACACGCACCTGTCTTT
GAACACGGCGCAGCTGGCCGAGTACGAGCGGCGATCACAGTTTCTGTCCA
ACTCCACTGTGTACATCGTGGAGGTGGGGCGGCCGGAGGCGTTGTTGAAC
GTGCTGTCCAAGCACGATTGGAAGCGGATAAGCGCCGATATTGACTTGGT
AGCGTTCGTGTGGGATGATCTGCCCGTGTTTTTGACCGACGGCTGGGTGC
ATGCGGCGGAGACCATCCTCAAACCAACCGTGCCGCACGCCAACATTTCG
CTGGTGCTGTTTCAATGCGGCTGCGTGTTGCCGGCGTCGTACTTCACGTT
GGTGGAACATCGACTGGCGGGCTTTGAGTGCGTGCTGCTACCGGGCTGGG
TGCTGGATGCTTCGCACGTGCATTGGCTGGACGTGCAGGAGGGCGATGCG
TGTAAACGACGTGACGCCGTGCTCAAGTCTAGACTTGCCAGACGTTATCG
CGCGGAGCTTTCGGAGATTCATCGTATTGTGGTGGATCATAATGAGCGCG
TGGAGCGCGAGGCGGCTAATGGAACCGCCGTTGAGAAGGAGCTGACGAAT
GACAGGTAG
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Coding sequence (CDS) from alignment at tig00000883_pilon:35568..36326+

>Ggra9341.t1 ID=Ggra9341.t1|Name=Ggra9341.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=759bp|location=Sequence derived from alignment at tig00000883_pilon:35568..36326+ (Gracilaria gracilis GNS1m male)
ATGGCGGGCAAGTCGAAGCGAccgccgcgcgcaaactcgtcgtcgtcgcc
gacgccgggcgcgcgccgccgctcgccgcacgccgcgcacagcccgctcg
cagccAAGCTCGACCTGGACTCGGCGTTCTTCTGGCTGCTGCTGGCGTTT
TTGCTCACCGCGTTCACGTTCCTGTCGTTGAGGGACACGCACCTGTCTTT
GAACACGGCGCAGCTGGCCGAGTACGAGCGGCGATCACAGTTTCTGTCCA
ACTCCACTGTGTACATCGTGGAGGTGGGGCGGCCGGAGGCGTTGTTGAAC
GTGCTGTCCAAGCACGATTGGAAGCGGATAAGCGCCGATATTGACTTGGT
AGCGTTCGTGTGGGATGATCTGCCCGTGTTTTTGACCGACGGCTGGGTGC
ATGCGGCGGAGACCATCCTCAAACCAACCGTGCCGCACGCCAACATTTCG
CTGGTGCTGTTTCAATGCGGCTGCGTGTTGCCGGCGTCGTACTTCACGTT
GGTGGAACATCGACTGGCGGGCTTTGAGTGCGTGCTGCTACCGGGCTGGG
TGCTGGATGCTTCGCACGTGCATTGGCTGGACGTGCAGGAGGGCGATGCG
TGTAAACGACGTGACGCCGTGCTCAAGTCTAGACTTGCCAGACGTTATCG
CGCGGAGCTTTCGGAGATTCATCGTATTGTGGTGGATCATAATGAGCGCG
TGGAGCGCGAGGCGGCTAATGGAACCGCCGTTGAGAAGGAGCTGACGAAT
GACAGGTAG
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