Ggra9332.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9332.t1
Unique NameGgra9332.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length196
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:947662..948249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9332Ggra9332Gracilaria gracilis GNS1m malegenetig00000863_pilon 947662..948249 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9332.t1.stop1Ggra9332.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000863_pilon 947662..947664 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9332.t1.CDS1Ggra9332.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000863_pilon 947662..948249 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9332.t1.exon1Ggra9332.t1.exon1Gracilaria gracilis GNS1m maleexontig00000863_pilon 947662..948249 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9332.t1.start1Ggra9332.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000863_pilon 948247..948249 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9332.t1Ggra9332.t1Gracilaria gracilis GNS1m malepolypeptidetig00000863_pilon 947662..948249 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9332.t1 ID=Ggra9332.t1|Name=Ggra9332.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=196bp
MANNKYSALPTLLLLHTLTGLICFSFASQITPEELRDADIYVACFSGSCV
SLPYGTAYCFDREKEPIPEGPTVERPYNAVLLRGKLISKTTHAAIFLMQE
KFTVSWRFLYLYSLIDRECDSTFCSLDELRNADREIRALRKGDKLCVIPL
ELYERGSGLTTSARAIEVTDVSAGNLLDCSIRYGASNVRDKYPWF*
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spliced messenger RNA

>Ggra9332.t1 ID=Ggra9332.t1|Name=Ggra9332.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=588bp|location=Sequence derived from alignment at tig00000863_pilon:947662..948249- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCCAACAACAAATACTCCGCGTTGCCCACACTTTTGTTGCTGCATAC
TCTTACTGGCTTGATATGCTTTTCCTTTGCAAGTCAGATAACACCAGAAG
AACTTCGCGATGCTGACATATATGTCGCGTGCTTTTCGGGCTCTTGCGTC
TCTCTCCCGTACGGAACGGCGTACTGCTTTGATCGAGAAAAAGAGCCAAT
TCCAGAAGGTCCGACAGTGGAAAGGCCCTACAATGCTGTTTTGTTGCGTG
GAAAGCTAATCTCCAAGACAACGCACGCCGCAATCTTCCTCATGCAAGAG
AAATTTACCGTGTCGTGGAGGTTCTTGTACTTGTACTCGCTCATTGACCG
CGAGTGCGACAGCACGTTTTGTTCTCTTGACGAGCTGCGCAACGCCGATC
GCGAGATTCGGGCGCTTCGAAAGGGCGATAAGCTTTGTGTCATACCGTTG
GAATTGTACGAGAGAGGCAGCGGATTGACAACCAGTGCGAGGGCTATTGA
AGTAACGGACGTATCTGCGGGCAATCTACTTGATTGTTCCATTCGCTACG
GTGCTTCAAACGTTAGGGATAAGTATCCGTGGTTCTAA
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protein sequence of Ggra9332.t1

>Ggra9332.t1 ID=Ggra9332.t1|Name=Ggra9332.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=196bp
MANNKYSALPTLLLLHTLTGLICFSFASQITPEELRDADIYVACFSGSCV
SLPYGTAYCFDREKEPIPEGPTVERPYNAVLLRGKLISKTTHAAIFLMQE
KFTVSWRFLYLYSLIDRECDSTFCSLDELRNADREIRALRKGDKLCVIPL
ELYERGSGLTTSARAIEVTDVSAGNLLDCSIRYGASNVRDKYPWF*
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mRNA from alignment at tig00000863_pilon:947662..948249-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9332.t1 ID=Ggra9332.t1|Name=Ggra9332.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=588bp|location=Sequence derived from alignment at tig00000863_pilon:947662..948249- (Gracilaria gracilis GNS1m male)
ATGGCCAACAACAAATACTCCGCGTTGCCCACACTTTTGTTGCTGCATAC
TCTTACTGGCTTGATATGCTTTTCCTTTGCAAGTCAGATAACACCAGAAG
AACTTCGCGATGCTGACATATATGTCGCGTGCTTTTCGGGCTCTTGCGTC
TCTCTCCCGTACGGAACGGCGTACTGCTTTGATCGAGAAAAAGAGCCAAT
TCCAGAAGGTCCGACAGTGGAAAGGCCCTACAATGCTGTTTTGTTGCGTG
GAAAGCTAATCTCCAAGACAACGCACGCCGCAATCTTCCTCATGCAAGAG
AAATTTACCGTGTCGTGGAGGTTCTTGTACTTGTACTCGCTCATTGACCG
CGAGTGCGACAGCACGTTTTGTTCTCTTGACGAGCTGCGCAACGCCGATC
GCGAGATTCGGGCGCTTCGAAAGGGCGATAAGCTTTGTGTCATACCGTTG
GAATTGTACGAGAGAGGCAGCGGATTGACAACCAGTGCGAGGGCTATTGA
AGTAACGGACGTATCTGCGGGCAATCTACTTGATTGTTCCATTCGCTACG
GTGCTTCAAACGTTAGGGATAAGTATCCGTGGTTCTAA
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Coding sequence (CDS) from alignment at tig00000863_pilon:947662..948249-

>Ggra9332.t1 ID=Ggra9332.t1|Name=Ggra9332.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=588bp|location=Sequence derived from alignment at tig00000863_pilon:947662..948249- (Gracilaria gracilis GNS1m male)
ATGGCCAACAACAAATACTCCGCGTTGCCCACACTTTTGTTGCTGCATAC
TCTTACTGGCTTGATATGCTTTTCCTTTGCAAGTCAGATAACACCAGAAG
AACTTCGCGATGCTGACATATATGTCGCGTGCTTTTCGGGCTCTTGCGTC
TCTCTCCCGTACGGAACGGCGTACTGCTTTGATCGAGAAAAAGAGCCAAT
TCCAGAAGGTCCGACAGTGGAAAGGCCCTACAATGCTGTTTTGTTGCGTG
GAAAGCTAATCTCCAAGACAACGCACGCCGCAATCTTCCTCATGCAAGAG
AAATTTACCGTGTCGTGGAGGTTCTTGTACTTGTACTCGCTCATTGACCG
CGAGTGCGACAGCACGTTTTGTTCTCTTGACGAGCTGCGCAACGCCGATC
GCGAGATTCGGGCGCTTCGAAAGGGCGATAAGCTTTGTGTCATACCGTTG
GAATTGTACGAGAGAGGCAGCGGATTGACAACCAGTGCGAGGGCTATTGA
AGTAACGGACGTATCTGCGGGCAATCTACTTGATTGTTCCATTCGCTACG
GTGCTTCAAACGTTAGGGATAAGTATCCGTGGTTCTAA
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