Ggra9328.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9328.t1
Unique NameGgra9328.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length130
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:889963..890352 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9328Ggra9328Gracilaria gracilis GNS1m malegenetig00000863_pilon 889963..890352 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9328.t1.stop1Ggra9328.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000863_pilon 889963..889965 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9328.t1.CDS1Ggra9328.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000863_pilon 889963..890352 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9328.t1.exon1Ggra9328.t1.exon1Gracilaria gracilis GNS1m maleexontig00000863_pilon 889963..890352 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9328.t1.start1Ggra9328.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000863_pilon 890350..890352 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9328.t1Ggra9328.t1Gracilaria gracilis GNS1m malepolypeptidetig00000863_pilon 889963..890352 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9328.t1 ID=Ggra9328.t1|Name=Ggra9328.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=130bp
MIVLAEYHLQDRAAFWMLGLERENQKPETLEELREEMIREFVPTNEKAAA
RVNLMDLKLKDVEDLNEHVATFEDLVSLCGTPTNEAYIYFFNSLPKSYKG
KFAERFPDSQPMDRTGRQSIHAAYDYART*
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spliced messenger RNA

>Ggra9328.t1 ID=Ggra9328.t1|Name=Ggra9328.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=390bp|location=Sequence derived from alignment at tig00000863_pilon:889963..890352- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATAGTGTTGGCAGAGTATCATCTACAAGATCGAGCAGCATTCTGGAT
GCTAGGACTTGAACGGGAGAATCAGAAGCCCGAGACTCTTGAAGAATTGA
GAGAAGAAATGATTCGTGAATTTGTCCCTACGAATGAAAAAGCAGCAGCT
CGTGTAAACCTGATGGATTTGAAGTTAAAGGATGTCGAAGACCTCAACGA
ACACGTTGCAACCTTCGAAGATTTGGTTTCGTTGTGTGGTACGCCAACAA
ACGAAGCTTACATTTACTTCTTCAATAGCTTACCCAAGTCATACAAGGGA
AAATTTGCGGAACGTTTTCCAGATTCTCAACCCATGGACCGTACTGGACG
TCAGAGTATTCATGCAGCATATGACTACGCTAGAACGTGA
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protein sequence of Ggra9328.t1

>Ggra9328.t1 ID=Ggra9328.t1|Name=Ggra9328.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=130bp
MIVLAEYHLQDRAAFWMLGLERENQKPETLEELREEMIREFVPTNEKAAA
RVNLMDLKLKDVEDLNEHVATFEDLVSLCGTPTNEAYIYFFNSLPKSYKG
KFAERFPDSQPMDRTGRQSIHAAYDYART*
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mRNA from alignment at tig00000863_pilon:889963..890352-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9328.t1 ID=Ggra9328.t1|Name=Ggra9328.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=390bp|location=Sequence derived from alignment at tig00000863_pilon:889963..890352- (Gracilaria gracilis GNS1m male)
ATGATAGTGTTGGCAGAGTATCATCTACAAGATCGAGCAGCATTCTGGAT
GCTAGGACTTGAACGGGAGAATCAGAAGCCCGAGACTCTTGAAGAATTGA
GAGAAGAAATGATTCGTGAATTTGTCCCTACGAATGAAAAAGCAGCAGCT
CGTGTAAACCTGATGGATTTGAAGTTAAAGGATGTCGAAGACCTCAACGA
ACACGTTGCAACCTTCGAAGATTTGGTTTCGTTGTGTGGTACGCCAACAA
ACGAAGCTTACATTTACTTCTTCAATAGCTTACCCAAGTCATACAAGGGA
AAATTTGCGGAACGTTTTCCAGATTCTCAACCCATGGACCGTACTGGACG
TCAGAGTATTCATGCAGCATATGACTACGCTAGAACGTGA
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Coding sequence (CDS) from alignment at tig00000863_pilon:889963..890352-

>Ggra9328.t1 ID=Ggra9328.t1|Name=Ggra9328.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=390bp|location=Sequence derived from alignment at tig00000863_pilon:889963..890352- (Gracilaria gracilis GNS1m male)
ATGATAGTGTTGGCAGAGTATCATCTACAAGATCGAGCAGCATTCTGGAT
GCTAGGACTTGAACGGGAGAATCAGAAGCCCGAGACTCTTGAAGAATTGA
GAGAAGAAATGATTCGTGAATTTGTCCCTACGAATGAAAAAGCAGCAGCT
CGTGTAAACCTGATGGATTTGAAGTTAAAGGATGTCGAAGACCTCAACGA
ACACGTTGCAACCTTCGAAGATTTGGTTTCGTTGTGTGGTACGCCAACAA
ACGAAGCTTACATTTACTTCTTCAATAGCTTACCCAAGTCATACAAGGGA
AAATTTGCGGAACGTTTTCCAGATTCTCAACCCATGGACCGTACTGGACG
TCAGAGTATTCATGCAGCATATGACTACGCTAGAACGTGA
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