Ggra9301.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9301.t1
Unique NameGgra9301.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length399
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:212111..213307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9301Ggra9301Gracilaria gracilis GNS1m malegenetig00000863_pilon 212111..213307 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9301.t1.stop1Ggra9301.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000863_pilon 212111..212113 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9301.t1.CDS1Ggra9301.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000863_pilon 212111..213307 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9301.t1.exon1Ggra9301.t1.exon1Gracilaria gracilis GNS1m maleexontig00000863_pilon 212111..213307 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9301.t1.start1Ggra9301.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000863_pilon 213305..213307 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9301.t1Ggra9301.t1Gracilaria gracilis GNS1m malepolypeptidetig00000863_pilon 212111..213307 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9301.t1 ID=Ggra9301.t1|Name=Ggra9301.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=399bp
MSSPISSSGPRAFVFRSARMQCDAQSPVLSASEAAFERQWKRSLLKRSGV
AKQQQFPTQRRTGVEVSSSTRSRQFILPNATYLKRYPLVSFTVSPRTERL
YQNAYSVFRHSLRRIPASIEELDEFFADYVHESFYEDASPGHRQNVCYAL
AFMCLSRPSLRNGLGLSRRALEGWTKAVPPVPALPLTRSFMSAFAEYFIS
QNCTSASVALCVQWCTYMRASEVLSLRVRDVVFPNDVRIAHTRKNIAGIN
IENYKTGPMQFTALRDKHILGILQSYVENISQSPNARLFNFSYPRYNTLF
KEAATYFGLEAGRFTSHSARIGGALSDHLDGSSAETIAIIGRWKSFSSLQ
RYLTNGRAALARMRTSSDSQRLIRECSKRFDGLLEQCVQYRQSANCRT*
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spliced messenger RNA

>Ggra9301.t1 ID=Ggra9301.t1|Name=Ggra9301.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1197bp|location=Sequence derived from alignment at tig00000863_pilon:212111..213307- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTAGCCCAATTTCCTCATCCGGGCCGAGAGCGTTTGTCTTTCGCTC
GGCCAGGATGCAATGCGATGCGCAGTCTCCCGTTCTCTCTGCATCGGAAG
CCGCTTTTGAGAGGCAATGGAAGAGATCCTTGCTGAAGCGCTCGGGAGTT
GCAAAGCAGCAACAATTTCCTACCCAGCGTCGTACTGGAGTCGAGGTTTC
ATCGTCTACTCGAAGCCGGCAATTTATTCTTCCGAATGCAACATATCTCA
AGCGGTACCCCTTGGTATCGTTCACAGTATCTCCGAGGACAGAACGTCTG
TATCAAAATGCATACTCTGTTTTCAGACACTCTCTCCGGCGTATCCCTGC
CTCAATTGAAGAACTGGATGAATTCTTTGCAGACTATGTCCATGAGTCAT
TTTATGAAGACGCCTCGCCTGGTCACCGCCAAAACGTGTGCTACGCCTTG
GCGTTTATGTGCTTATCTCGACCTTCGTTGCGAAACGGTCTAGGTTTGTC
TCGCAGAGCTTTGGAAGGATGGACTAAAGCCGTTCCTCCTGTACCCGCAC
TTCCTTTGACGAGGTCTTTCATGTCTGCCTTCGCCGAATATTTTATTTCG
CAGAACTGTACGTCGGCTTCTGTTGCCCTTTGCGTTCAATGGTGCACGTA
TATGAGGGCTTCAGAAGTATTATCCTTGCGGGTGCGCGATGTGGTGTTTC
CGAACGATGTCCGAATAGCCCACACGAGAAAGAATATTGCTGGAATCAAC
ATTGAAAATTATAAGACCGGACCCATGCAATTTACAGCTTTGCGAGATAA
ACATATTCTTGGTATACTACAAAGCTACGTGGAGAATATTTCGCAGTCTC
CGAATGCAAGGTTGTTCAATTTTTCTTACCCAAGGTATAACACACTTTTC
AAAGAAGCTGCAACATACTTCGGGCTCGAAGCTGGACGGTTTACATCGCA
CTCGGCGCGAATAGGTGGTGCGCTGTCGGATCATCTGGATGGATCTTCAG
CGGAAACGATTGCAATTATTGGTAGATGGAAATCGTTTTCCTCGTTACAG
CGCTACCTTACCAATGGTCGAGCTGCCCTTGCTCGCATGCGAACATCAAG
CGATTCGCAGAGGCTCATTCGCGAATGTTCAAAGCGATTTGATGGGCTAC
TGGAGCAATGCGTACAGTATCGGCAAAGTGCGAACTGCAGAACCTAG
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protein sequence of Ggra9301.t1

>Ggra9301.t1 ID=Ggra9301.t1|Name=Ggra9301.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=399bp
MSSPISSSGPRAFVFRSARMQCDAQSPVLSASEAAFERQWKRSLLKRSGV
AKQQQFPTQRRTGVEVSSSTRSRQFILPNATYLKRYPLVSFTVSPRTERL
YQNAYSVFRHSLRRIPASIEELDEFFADYVHESFYEDASPGHRQNVCYAL
AFMCLSRPSLRNGLGLSRRALEGWTKAVPPVPALPLTRSFMSAFAEYFIS
QNCTSASVALCVQWCTYMRASEVLSLRVRDVVFPNDVRIAHTRKNIAGIN
IENYKTGPMQFTALRDKHILGILQSYVENISQSPNARLFNFSYPRYNTLF
KEAATYFGLEAGRFTSHSARIGGALSDHLDGSSAETIAIIGRWKSFSSLQ
RYLTNGRAALARMRTSSDSQRLIRECSKRFDGLLEQCVQYRQSANCRT*
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mRNA from alignment at tig00000863_pilon:212111..213307-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9301.t1 ID=Ggra9301.t1|Name=Ggra9301.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1197bp|location=Sequence derived from alignment at tig00000863_pilon:212111..213307- (Gracilaria gracilis GNS1m male)
ATGAGTAGCCCAATTTCCTCATCCGGGCCGAGAGCGTTTGTCTTTCGCTC
GGCCAGGATGCAATGCGATGCGCAGTCTCCCGTTCTCTCTGCATCGGAAG
CCGCTTTTGAGAGGCAATGGAAGAGATCCTTGCTGAAGCGCTCGGGAGTT
GCAAAGCAGCAACAATTTCCTACCCAGCGTCGTACTGGAGTCGAGGTTTC
ATCGTCTACTCGAAGCCGGCAATTTATTCTTCCGAATGCAACATATCTCA
AGCGGTACCCCTTGGTATCGTTCACAGTATCTCCGAGGACAGAACGTCTG
TATCAAAATGCATACTCTGTTTTCAGACACTCTCTCCGGCGTATCCCTGC
CTCAATTGAAGAACTGGATGAATTCTTTGCAGACTATGTCCATGAGTCAT
TTTATGAAGACGCCTCGCCTGGTCACCGCCAAAACGTGTGCTACGCCTTG
GCGTTTATGTGCTTATCTCGACCTTCGTTGCGAAACGGTCTAGGTTTGTC
TCGCAGAGCTTTGGAAGGATGGACTAAAGCCGTTCCTCCTGTACCCGCAC
TTCCTTTGACGAGGTCTTTCATGTCTGCCTTCGCCGAATATTTTATTTCG
CAGAACTGTACGTCGGCTTCTGTTGCCCTTTGCGTTCAATGGTGCACGTA
TATGAGGGCTTCAGAAGTATTATCCTTGCGGGTGCGCGATGTGGTGTTTC
CGAACGATGTCCGAATAGCCCACACGAGAAAGAATATTGCTGGAATCAAC
ATTGAAAATTATAAGACCGGACCCATGCAATTTACAGCTTTGCGAGATAA
ACATATTCTTGGTATACTACAAAGCTACGTGGAGAATATTTCGCAGTCTC
CGAATGCAAGGTTGTTCAATTTTTCTTACCCAAGGTATAACACACTTTTC
AAAGAAGCTGCAACATACTTCGGGCTCGAAGCTGGACGGTTTACATCGCA
CTCGGCGCGAATAGGTGGTGCGCTGTCGGATCATCTGGATGGATCTTCAG
CGGAAACGATTGCAATTATTGGTAGATGGAAATCGTTTTCCTCGTTACAG
CGCTACCTTACCAATGGTCGAGCTGCCCTTGCTCGCATGCGAACATCAAG
CGATTCGCAGAGGCTCATTCGCGAATGTTCAAAGCGATTTGATGGGCTAC
TGGAGCAATGCGTACAGTATCGGCAAAGTGCGAACTGCAGAACCTAG
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Coding sequence (CDS) from alignment at tig00000863_pilon:212111..213307-

>Ggra9301.t1 ID=Ggra9301.t1|Name=Ggra9301.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1197bp|location=Sequence derived from alignment at tig00000863_pilon:212111..213307- (Gracilaria gracilis GNS1m male)
ATGAGTAGCCCAATTTCCTCATCCGGGCCGAGAGCGTTTGTCTTTCGCTC
GGCCAGGATGCAATGCGATGCGCAGTCTCCCGTTCTCTCTGCATCGGAAG
CCGCTTTTGAGAGGCAATGGAAGAGATCCTTGCTGAAGCGCTCGGGAGTT
GCAAAGCAGCAACAATTTCCTACCCAGCGTCGTACTGGAGTCGAGGTTTC
ATCGTCTACTCGAAGCCGGCAATTTATTCTTCCGAATGCAACATATCTCA
AGCGGTACCCCTTGGTATCGTTCACAGTATCTCCGAGGACAGAACGTCTG
TATCAAAATGCATACTCTGTTTTCAGACACTCTCTCCGGCGTATCCCTGC
CTCAATTGAAGAACTGGATGAATTCTTTGCAGACTATGTCCATGAGTCAT
TTTATGAAGACGCCTCGCCTGGTCACCGCCAAAACGTGTGCTACGCCTTG
GCGTTTATGTGCTTATCTCGACCTTCGTTGCGAAACGGTCTAGGTTTGTC
TCGCAGAGCTTTGGAAGGATGGACTAAAGCCGTTCCTCCTGTACCCGCAC
TTCCTTTGACGAGGTCTTTCATGTCTGCCTTCGCCGAATATTTTATTTCG
CAGAACTGTACGTCGGCTTCTGTTGCCCTTTGCGTTCAATGGTGCACGTA
TATGAGGGCTTCAGAAGTATTATCCTTGCGGGTGCGCGATGTGGTGTTTC
CGAACGATGTCCGAATAGCCCACACGAGAAAGAATATTGCTGGAATCAAC
ATTGAAAATTATAAGACCGGACCCATGCAATTTACAGCTTTGCGAGATAA
ACATATTCTTGGTATACTACAAAGCTACGTGGAGAATATTTCGCAGTCTC
CGAATGCAAGGTTGTTCAATTTTTCTTACCCAAGGTATAACACACTTTTC
AAAGAAGCTGCAACATACTTCGGGCTCGAAGCTGGACGGTTTACATCGCA
CTCGGCGCGAATAGGTGGTGCGCTGTCGGATCATCTGGATGGATCTTCAG
CGGAAACGATTGCAATTATTGGTAGATGGAAATCGTTTTCCTCGTTACAG
CGCTACCTTACCAATGGTCGAGCTGCCCTTGCTCGCATGCGAACATCAAG
CGATTCGCAGAGGCTCATTCGCGAATGTTCAAAGCGATTTGATGGGCTAC
TGGAGCAATGCGTACAGTATCGGCAAAGTGCGAACTGCAGAACCTAG
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