Ggra9264.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9264.t1
Unique NameGgra9264.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length315
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:628366..629310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9264Ggra9264Gracilaria gracilis GNS1m malegenetig00000075_pilon 628366..629310 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9264.t1.stop1Ggra9264.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 628366..628368 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9264.t1.CDS1Ggra9264.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 628366..629310 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9264.t1.exon1Ggra9264.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 628366..629310 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9264.t1.start1Ggra9264.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 629308..629310 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9264.t1Ggra9264.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 628366..629310 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9264.t1 ID=Ggra9264.t1|Name=Ggra9264.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=315bp
MLFLVVGAILQVKVSMIWAASRILRKLRNPVRKRMGRNLNEKHVEQRFVE
MVLTLCKGRNHRYSRLFYRIYELFFISSTTWGYYKGDLLLMDSYLAIALP
MMTGSFAVIGSGVVKRYEVGSVFLLAFVYGGFIFASLEGVFGVPEVLKRI
GFGVEMAVIVITVLDLLYDVYGDYRGSHSDLFCTAQAFYKGNQNEAQIAR
FDQMKQFVRDRGAGEVHDEGSRMWKVARRRVVVDFVLYFLQCVAAIITSN
NGGQFFIVARIVGLEAFEMISIFLLFLNEGLVEPTLYLRLMEHALDDDEN
VNSQRMRPNDVHRV*
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spliced messenger RNA

>Ggra9264.t1 ID=Ggra9264.t1|Name=Ggra9264.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00000075_pilon:628366..629310- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTATTCTTGGTAGTGGGCGCCATTCTGCAGGTGAAGGTGAGTATGAT
CTGGGCTGCTTCTCGGATTCTGCGCAAACTTCGAAACCCGGTGAGGAAGA
GAATGGGCAGGAACTTGAACGAGAAGCACGTGGAGCAACGCTTTGTGGAA
ATGGTTTTGACGTTGTGCAAGGGACGGAACCATCGGTACAGCCGACTGTT
TTATAGAATATACGAGCTGTTTTTCATTTCTTCCACCACATGGGGATACT
ATAAAGGAGATTTGCTTCTCATGGATTCATATCTGGCCATTGCACTGCCC
ATGATGACAGGCTCTTTTGCGGTAATTGGAAGCGGAGTTGTGAAAAGGTA
TGAAGTGGGATCGGTGTTCTTGTTGGCTTTTGTTTATGGAGGATTTATAT
TTGCTTCATTGGAAGGCGTGTTTGGTGTACCAGAGGTGTTGAAAAGGATC
GGATTTGGGGTTGAGATGGCGGTAATTGTGATTACAGTCCTCGATTTGCT
ATATGACGTGTACGGGGACTATCGCGGATCTCATTCAGACTTGTTCTGTA
CGGCTCAAGCATTCTATAAAGGAAACCAGAACGAAGCACAAATTGCAAGA
TTCGACCAAATGAAGCAATTTGTGCGCGATCGAGGGGCAGGTGAAGTGCA
TGACGAAGGCAGCCGGATGTGGAAAGTGGCCAGAAGAAGAGTTGTTGTAG
ATTTCGTTCTGTACTTTCTGCAGTGCGTTGCCGCAATTATAACGTCCAAT
AATGGTGGCCAGTTCTTTATTGTGGCAAGAATTGTGGGACTTGAAGCGTT
TGAGATGATATCGATTTTTCTTTTGTTCCTGAATGAGGGCTTGGTTGAAC
CGACTCTGTACTTGAGGTTGATGGAGCACGCTCTCGATGATGATGAAAAT
GTGAACAGCCAGCGTATGCGACCCAACGATGTGCACCGCGTTTGA
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protein sequence of Ggra9264.t1

>Ggra9264.t1 ID=Ggra9264.t1|Name=Ggra9264.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=315bp
MLFLVVGAILQVKVSMIWAASRILRKLRNPVRKRMGRNLNEKHVEQRFVE
MVLTLCKGRNHRYSRLFYRIYELFFISSTTWGYYKGDLLLMDSYLAIALP
MMTGSFAVIGSGVVKRYEVGSVFLLAFVYGGFIFASLEGVFGVPEVLKRI
GFGVEMAVIVITVLDLLYDVYGDYRGSHSDLFCTAQAFYKGNQNEAQIAR
FDQMKQFVRDRGAGEVHDEGSRMWKVARRRVVVDFVLYFLQCVAAIITSN
NGGQFFIVARIVGLEAFEMISIFLLFLNEGLVEPTLYLRLMEHALDDDEN
VNSQRMRPNDVHRV*
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mRNA from alignment at tig00000075_pilon:628366..629310-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9264.t1 ID=Ggra9264.t1|Name=Ggra9264.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00000075_pilon:628366..629310- (Gracilaria gracilis GNS1m male)
ATGCTATTCTTGGTAGTGGGCGCCATTCTGCAGGTGAAGGTGAGTATGAT
CTGGGCTGCTTCTCGGATTCTGCGCAAACTTCGAAACCCGGTGAGGAAGA
GAATGGGCAGGAACTTGAACGAGAAGCACGTGGAGCAACGCTTTGTGGAA
ATGGTTTTGACGTTGTGCAAGGGACGGAACCATCGGTACAGCCGACTGTT
TTATAGAATATACGAGCTGTTTTTCATTTCTTCCACCACATGGGGATACT
ATAAAGGAGATTTGCTTCTCATGGATTCATATCTGGCCATTGCACTGCCC
ATGATGACAGGCTCTTTTGCGGTAATTGGAAGCGGAGTTGTGAAAAGGTA
TGAAGTGGGATCGGTGTTCTTGTTGGCTTTTGTTTATGGAGGATTTATAT
TTGCTTCATTGGAAGGCGTGTTTGGTGTACCAGAGGTGTTGAAAAGGATC
GGATTTGGGGTTGAGATGGCGGTAATTGTGATTACAGTCCTCGATTTGCT
ATATGACGTGTACGGGGACTATCGCGGATCTCATTCAGACTTGTTCTGTA
CGGCTCAAGCATTCTATAAAGGAAACCAGAACGAAGCACAAATTGCAAGA
TTCGACCAAATGAAGCAATTTGTGCGCGATCGAGGGGCAGGTGAAGTGCA
TGACGAAGGCAGCCGGATGTGGAAAGTGGCCAGAAGAAGAGTTGTTGTAG
ATTTCGTTCTGTACTTTCTGCAGTGCGTTGCCGCAATTATAACGTCCAAT
AATGGTGGCCAGTTCTTTATTGTGGCAAGAATTGTGGGACTTGAAGCGTT
TGAGATGATATCGATTTTTCTTTTGTTCCTGAATGAGGGCTTGGTTGAAC
CGACTCTGTACTTGAGGTTGATGGAGCACGCTCTCGATGATGATGAAAAT
GTGAACAGCCAGCGTATGCGACCCAACGATGTGCACCGCGTTTGA
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Coding sequence (CDS) from alignment at tig00000075_pilon:628366..629310-

>Ggra9264.t1 ID=Ggra9264.t1|Name=Ggra9264.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=945bp|location=Sequence derived from alignment at tig00000075_pilon:628366..629310- (Gracilaria gracilis GNS1m male)
ATGCTATTCTTGGTAGTGGGCGCCATTCTGCAGGTGAAGGTGAGTATGAT
CTGGGCTGCTTCTCGGATTCTGCGCAAACTTCGAAACCCGGTGAGGAAGA
GAATGGGCAGGAACTTGAACGAGAAGCACGTGGAGCAACGCTTTGTGGAA
ATGGTTTTGACGTTGTGCAAGGGACGGAACCATCGGTACAGCCGACTGTT
TTATAGAATATACGAGCTGTTTTTCATTTCTTCCACCACATGGGGATACT
ATAAAGGAGATTTGCTTCTCATGGATTCATATCTGGCCATTGCACTGCCC
ATGATGACAGGCTCTTTTGCGGTAATTGGAAGCGGAGTTGTGAAAAGGTA
TGAAGTGGGATCGGTGTTCTTGTTGGCTTTTGTTTATGGAGGATTTATAT
TTGCTTCATTGGAAGGCGTGTTTGGTGTACCAGAGGTGTTGAAAAGGATC
GGATTTGGGGTTGAGATGGCGGTAATTGTGATTACAGTCCTCGATTTGCT
ATATGACGTGTACGGGGACTATCGCGGATCTCATTCAGACTTGTTCTGTA
CGGCTCAAGCATTCTATAAAGGAAACCAGAACGAAGCACAAATTGCAAGA
TTCGACCAAATGAAGCAATTTGTGCGCGATCGAGGGGCAGGTGAAGTGCA
TGACGAAGGCAGCCGGATGTGGAAAGTGGCCAGAAGAAGAGTTGTTGTAG
ATTTCGTTCTGTACTTTCTGCAGTGCGTTGCCGCAATTATAACGTCCAAT
AATGGTGGCCAGTTCTTTATTGTGGCAAGAATTGTGGGACTTGAAGCGTT
TGAGATGATATCGATTTTTCTTTTGTTCCTGAATGAGGGCTTGGTTGAAC
CGACTCTGTACTTGAGGTTGATGGAGCACGCTCTCGATGATGATGAAAAT
GTGAACAGCCAGCGTATGCGACCCAACGATGTGCACCGCGTTTGA
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