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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005703644.1 |
| Preferred name | WDTC1 |
| PFAMs | WD40 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00003,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11795,ko:K11804,ko:K11807,ko:K19199 |
| KEGG Reaction | R03875,R04866,R04867 |
| KEGG Pathway | ko00310,map00310 |
| GOs | GO:0000122,GO:0000151,GO:0001101,GO:0001701,GO:0003674,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006355,GO:0006357,GO:0006464,GO:0006629,GO:0006807,GO:0006950,GO:0007275,GO:0008150,GO:0008152,GO:0008361,GO:0009269,GO:0009414,GO:0009415,GO:0009628,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010558,GO:0010565,GO:0010605,GO:0010629,GO:0010883,GO:0010888,GO:0010889,GO:0010891,GO:0016043,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019318,GO:0019538,GO:0019725,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032535,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032991,GO:0035264,GO:0036211,GO:0040007,GO:0042221,GO:0042304,GO:0042393,GO:0042592,GO:0042826,GO:0043009,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043434,GO:0043687,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045717,GO:0045833,GO:0045892,GO:0045922,GO:0045934,GO:0046890,GO:0048519,GO:0048523,GO:0048589,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051055,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0055082,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0080008,GO:0080090,GO:0090066,GO:0098772,GO:1901564,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905952,GO:1905953,GO:1990234,GO:2000112,GO:2000113,GO:2001141 |
| Evalue | 2.55e-41 |
| EggNOG OGs | KOG1334@1|root,KOG1310@2759|Eukaryota |
| EC | 2.1.1.43 |
| Description | negative regulation of fatty acid biosynthetic process |
| COG category | S |
| BRITE | ko00000,ko00001,ko01000,ko03036,ko04121 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9235.t1.start1 | Ggra9235.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000075_pilon 456056..456058 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra9235.t1.stop1 | Ggra9235.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000075_pilon 458204..458206 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9235.t1 ID=Ggra9235.t1|Name=Ggra9235.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=717bp MDVGFRNLSSILRQREYDLISRPESILHGHHSLTRNMDWSVQLAGHMGCV NRLALDEEGKFLLSGSDDCTLRIWSIEDHNLVLPKGVITPGHVNNIFGVA FMPNTGNSLVASAGLDQQVHLTNVETSKSLRWICHTDSVKTVAPLDANVF ITASKDGTSRLFDARIPPTAHPSDSSIIVVNIPCTNPFSNGINSAIPSPM FPNHILVSSGDPYLRIFDLRFNTSNRLNSPRISQLKSRTTCIESYCPSHL YELAPERCSPSELMHPAYVTFATFSSDASQIVASYYMDAVHVFNRRQQSQ SGPYYPSFKFNSERKRVVWLLIQEAAERLLNGSVGCAKTAIAKANSVLEL EPQNILALLYKAESLLLRENYSDFREAFETLQLLINLIREQPRLITALWG SDGPMCPPCFPESIGNWERKAQIWLMIFEFQQIRAMYKMIPYSPVGVLQP GVNGLVTKRRFEHLRELCSELMERRWKLFSKQPTSNGHRSTNSPGSMYDC SLLRDDIHRDALGTEEESSRLYSTEFSRLRKQVLVRLVEKLASSKLNMLL FAFDEKIADLEPRNPNSQTNRRLATTKEYWIRVMNQDHIPHHFARELKAL EAEEKRLLAGFDSEALWGVRPRKELPCKRYHGHQSEKTDIKEARFYGADN QVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGI DNTIKVLTPDLSSSEE* back to topspliced messenger RNA >Ggra9235.t1 ID=Ggra9235.t1|Name=Ggra9235.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2151bp|location=Sequence derived from alignment at tig00000075_pilon:456056..458206+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGGACGTGGGCTTTCGCAACCTGTCGTCTATTCTTCGCCAACGCGAATA TGACCTGATTTCACGCCCCGAGAGCATTTTACATGGCCACCACTCTCTCA CCCGCAACATGGACTGGTCTGTACAACTGGCAGGGCATATGGGCTGCGTC AACCGTCTGGCACTGGACGAAGAGGGAAAGTTTCTTCTCTCCGGCTCAGA TGACTGTACTCTTCGGATCTGGTCCATCGAAGACCATAATCTCGTCCTCC CCAAGGGAGTCATCACCCCGGGACACGTCAACAACATTTTCGGTGTCGCG TTCATGCCGAATACCGGAAACTCCCTTGTGGCATCTGCGGGCTTGGATCA ACAAGTTCACCTCACCAACGTCGAAACTTCCAAGAGTCTGAGGTGGATTT GTCACACGGACTCCGTCAAGACCGTTGCGCCCTTAGATGCAAACGTATTC ATCACGGCGTCAAAGGATGGAACCTCACGTTTATTCGATGCTAGAATCCC TCCCACTGCCCATCCGTCCGATTCGTCTATCATTGTTGTTAACATACCGT GCACCAACCCATTTTCGAACGGCATCAACTCAGCCATACCATCGCCAATG TTCCCCAATCACATCTTGGTGTCCTCCGGCGACCCCTACTTGCGAATATT CGACCTACGCTTCAACACTAGCAATCGCCTCAACTCGCCCCGAATCTCGC AGCTCAAGTCGCGCACAACCTGCATTGAGTCCTACTGTCCATCTCATTTG TATGAACTAGCCCCGGAGCGTTGTTCTCCAAGTGAGCTCATGCATCCAGC TTACGTTACATTCGCCACCTTTTCATCAGATGCAAGCCAGATTGTGGCAT CGTACTATATGGATGCGGTTCATGTTTTCAATCGCCGTCAACAATCACAG TCTGGGCCTTACTATCCAAGCTTCAAGTTCAACTCCGAAAGGAAACGTGT AGTGTGGTTGTTGATTCAAGAGGCTGCTGAAAGGCTCTTAAACGGTTCTG TGGGTTGCGCGAAAACTGCAATAGCGAAAGCCAACAGCGTTCTCGAATTG GAACCCCAAAATATTCTTGCGTTACTCTATAAAGCCGAGAGTTTGCTTTT GCGTGAAAACTATAGTGACTTTCGAGAAGCGTTTGAAACCCTTCAACTCT TAATCAACCTTATTAGGGAACAGCCTCGGCTTATAACTGCTCTATGGGGA TCCGATGGTCCAATGTGTCCACCATGCTTTCCAGAATCCATAGGTAACTG GGAACGAAAGGCGCAGATATGGTTGATGATCTTCGAGTTCCAACAAATAA GAGCAATGTATAAAATGATACCATACTCACCAGTCGGAGTTTTGCAACCC GGTGTAAATGGATTAGTGACAAAAAGACGCTTCGAACATCTTAGAGAGCT CTGCAGTGAGCTAATGGAGAGAAGGTGGAAATTGTTTAGCAAACAACCGA CTTCTAATGGTCATCGATCTACCAACTCTCCGGGATCCATGTATGATTGC TCTTTGCTCAGAGATGATATACATAGAGACGCTCTAGGCACTGAGGAAGA ATCATCACGCCTTTATAGCACAGAGTTTTCGCGGCTGCGGAAGCAAGTCT TGGTTCGCCTAGTAGAGAAACTTGCTTCATCTAAACTGAACATGCTTCTC TTTGCGTTTGACGAAAAAATTGCGGACCTCGAACCTCGTAACCCGAACTC ACAAACCAATCGTCGTTTGGCAACTACAAAGGAGTACTGGATAAGGGTTA TGAATCAAGACCATATCCCGCATCATTTTGCGAGAGAGTTGAAGGCATTG GAAGCTGAGGAAAAACGACTATTGGCAGGATTTGACTCCGAGGCGTTGTG GGGCGTCCGACCACGAAAGGAACTTCCATGCAAAAGATATCATGGACATC AAAGCGAAAAGACAGATATAAAAGAAGCCCGATTCTATGGTGCGGATAAT CAAGTGGTTCTATCTGGGTCCGACGACGGTTTTGTTTATATGTGGGCTGC GGGAACCTGCGAACTGCTAACCCGAGTTTCCGCCGACGATCAAATTGTCA ACTGTGTTCTGCCGCACCCCTACCGATCGATGATACTTGTGTCTGGAATA GATAATACGATCAAGGTGTTAACTCCCGATTTATCAAGTAGCGAGGAATG A back to topprotein sequence of Ggra9235.t1 >Ggra9235.t1 ID=Ggra9235.t1|Name=Ggra9235.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=717bp
MDVGFRNLSSILRQREYDLISRPESILHGHHSLTRNMDWSVQLAGHMGCV NRLALDEEGKFLLSGSDDCTLRIWSIEDHNLVLPKGVITPGHVNNIFGVA FMPNTGNSLVASAGLDQQVHLTNVETSKSLRWICHTDSVKTVAPLDANVF ITASKDGTSRLFDARIPPTAHPSDSSIIVVNIPCTNPFSNGINSAIPSPM FPNHILVSSGDPYLRIFDLRFNTSNRLNSPRISQLKSRTTCIESYCPSHL YELAPERCSPSELMHPAYVTFATFSSDASQIVASYYMDAVHVFNRRQQSQ SGPYYPSFKFNSERKRVVWLLIQEAAERLLNGSVGCAKTAIAKANSVLEL EPQNILALLYKAESLLLRENYSDFREAFETLQLLINLIREQPRLITALWG SDGPMCPPCFPESIGNWERKAQIWLMIFEFQQIRAMYKMIPYSPVGVLQP GVNGLVTKRRFEHLRELCSELMERRWKLFSKQPTSNGHRSTNSPGSMYDC SLLRDDIHRDALGTEEESSRLYSTEFSRLRKQVLVRLVEKLASSKLNMLL FAFDEKIADLEPRNPNSQTNRRLATTKEYWIRVMNQDHIPHHFARELKAL EAEEKRLLAGFDSEALWGVRPRKELPCKRYHGHQSEKTDIKEARFYGADN QVVLSGSDDGFVYMWAAGTCELLTRVSADDQIVNCVLPHPYRSMILVSGI DNTIKVLTPDLSSSEE* back to topmRNA from alignment at tig00000075_pilon:456056..458206+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9235.t1 ID=Ggra9235.t1|Name=Ggra9235.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2151bp|location=Sequence derived from alignment at tig00000075_pilon:456056..458206+ (Gracilaria gracilis GNS1m male) ATGGACGTGGGCTTTCGCAACCTGTCGTCTATTCTTCGCCAACGCGAATA
TGACCTGATTTCACGCCCCGAGAGCATTTTACATGGCCACCACTCTCTCA
CCCGCAACATGGACTGGTCTGTACAACTGGCAGGGCATATGGGCTGCGTC
AACCGTCTGGCACTGGACGAAGAGGGAAAGTTTCTTCTCTCCGGCTCAGA
TGACTGTACTCTTCGGATCTGGTCCATCGAAGACCATAATCTCGTCCTCC
CCAAGGGAGTCATCACCCCGGGACACGTCAACAACATTTTCGGTGTCGCG
TTCATGCCGAATACCGGAAACTCCCTTGTGGCATCTGCGGGCTTGGATCA
ACAAGTTCACCTCACCAACGTCGAAACTTCCAAGAGTCTGAGGTGGATTT
GTCACACGGACTCCGTCAAGACCGTTGCGCCCTTAGATGCAAACGTATTC
ATCACGGCGTCAAAGGATGGAACCTCACGTTTATTCGATGCTAGAATCCC
TCCCACTGCCCATCCGTCCGATTCGTCTATCATTGTTGTTAACATACCGT
GCACCAACCCATTTTCGAACGGCATCAACTCAGCCATACCATCGCCAATG
TTCCCCAATCACATCTTGGTGTCCTCCGGCGACCCCTACTTGCGAATATT
CGACCTACGCTTCAACACTAGCAATCGCCTCAACTCGCCCCGAATCTCGC
AGCTCAAGTCGCGCACAACCTGCATTGAGTCCTACTGTCCATCTCATTTG
TATGAACTAGCCCCGGAGCGTTGTTCTCCAAGTGAGCTCATGCATCCAGC
TTACGTTACATTCGCCACCTTTTCATCAGATGCAAGCCAGATTGTGGCAT
CGTACTATATGGATGCGGTTCATGTTTTCAATCGCCGTCAACAATCACAG
TCTGGGCCTTACTATCCAAGCTTCAAGTTCAACTCCGAAAGGAAACGTGT
AGTGTGGTTGTTGATTCAAGAGGCTGCTGAAAGGCTCTTAAACGGTTCTG
TGGGTTGCGCGAAAACTGCAATAGCGAAAGCCAACAGCGTTCTCGAATTG
GAACCCCAAAATATTCTTGCGTTACTCTATAAAGCCGAGAGTTTGCTTTT
GCGTGAAAACTATAGTGACTTTCGAGAAGCGTTTGAAACCCTTCAACTCT
TAATCAACCTTATTAGGGAACAGCCTCGGCTTATAACTGCTCTATGGGGA
TCCGATGGTCCAATGTGTCCACCATGCTTTCCAGAATCCATAGGTAACTG
GGAACGAAAGGCGCAGATATGGTTGATGATCTTCGAGTTCCAACAAATAA
GAGCAATGTATAAAATGATACCATACTCACCAGTCGGAGTTTTGCAACCC
GGTGTAAATGGATTAGTGACAAAAAGACGCTTCGAACATCTTAGAGAGCT
CTGCAGTGAGCTAATGGAGAGAAGGTGGAAATTGTTTAGCAAACAACCGA
CTTCTAATGGTCATCGATCTACCAACTCTCCGGGATCCATGTATGATTGC
TCTTTGCTCAGAGATGATATACATAGAGACGCTCTAGGCACTGAGGAAGA
ATCATCACGCCTTTATAGCACAGAGTTTTCGCGGCTGCGGAAGCAAGTCT
TGGTTCGCCTAGTAGAGAAACTTGCTTCATCTAAACTGAACATGCTTCTC
TTTGCGTTTGACGAAAAAATTGCGGACCTCGAACCTCGTAACCCGAACTC
ACAAACCAATCGTCGTTTGGCAACTACAAAGGAGTACTGGATAAGGGTTA
TGAATCAAGACCATATCCCGCATCATTTTGCGAGAGAGTTGAAGGCATTG
GAAGCTGAGGAAAAACGACTATTGGCAGGATTTGACTCCGAGGCGTTGTG
GGGCGTCCGACCACGAAAGGAACTTCCATGCAAAAGATATCATGGACATC
AAAGCGAAAAGACAGATATAAAAGAAGCCCGATTCTATGGTGCGGATAAT
CAAGTGGTTCTATCTGGGTCCGACGACGGTTTTGTTTATATGTGGGCTGC
GGGAACCTGCGAACTGCTAACCCGAGTTTCCGCCGACGATCAAATTGTCA
ACTGTGTTCTGCCGCACCCCTACCGATCGATGATACTTGTGTCTGGAATA
GATAATACGATCAAGGTGTTAACTCCCGATTTATCAAGTAGCGAGGAATG
A back to topCoding sequence (CDS) from alignment at tig00000075_pilon:456056..458206+ >Ggra9235.t1 ID=Ggra9235.t1|Name=Ggra9235.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2151bp|location=Sequence derived from alignment at tig00000075_pilon:456056..458206+ (Gracilaria gracilis GNS1m male) ATGGACGTGGGCTTTCGCAACCTGTCGTCTATTCTTCGCCAACGCGAATA TGACCTGATTTCACGCCCCGAGAGCATTTTACATGGCCACCACTCTCTCA CCCGCAACATGGACTGGTCTGTACAACTGGCAGGGCATATGGGCTGCGTC AACCGTCTGGCACTGGACGAAGAGGGAAAGTTTCTTCTCTCCGGCTCAGA TGACTGTACTCTTCGGATCTGGTCCATCGAAGACCATAATCTCGTCCTCC CCAAGGGAGTCATCACCCCGGGACACGTCAACAACATTTTCGGTGTCGCG TTCATGCCGAATACCGGAAACTCCCTTGTGGCATCTGCGGGCTTGGATCA ACAAGTTCACCTCACCAACGTCGAAACTTCCAAGAGTCTGAGGTGGATTT GTCACACGGACTCCGTCAAGACCGTTGCGCCCTTAGATGCAAACGTATTC ATCACGGCGTCAAAGGATGGAACCTCACGTTTATTCGATGCTAGAATCCC TCCCACTGCCCATCCGTCCGATTCGTCTATCATTGTTGTTAACATACCGT GCACCAACCCATTTTCGAACGGCATCAACTCAGCCATACCATCGCCAATG TTCCCCAATCACATCTTGGTGTCCTCCGGCGACCCCTACTTGCGAATATT CGACCTACGCTTCAACACTAGCAATCGCCTCAACTCGCCCCGAATCTCGC AGCTCAAGTCGCGCACAACCTGCATTGAGTCCTACTGTCCATCTCATTTG TATGAACTAGCCCCGGAGCGTTGTTCTCCAAGTGAGCTCATGCATCCAGC TTACGTTACATTCGCCACCTTTTCATCAGATGCAAGCCAGATTGTGGCAT CGTACTATATGGATGCGGTTCATGTTTTCAATCGCCGTCAACAATCACAG TCTGGGCCTTACTATCCAAGCTTCAAGTTCAACTCCGAAAGGAAACGTGT AGTGTGGTTGTTGATTCAAGAGGCTGCTGAAAGGCTCTTAAACGGTTCTG TGGGTTGCGCGAAAACTGCAATAGCGAAAGCCAACAGCGTTCTCGAATTG GAACCCCAAAATATTCTTGCGTTACTCTATAAAGCCGAGAGTTTGCTTTT GCGTGAAAACTATAGTGACTTTCGAGAAGCGTTTGAAACCCTTCAACTCT TAATCAACCTTATTAGGGAACAGCCTCGGCTTATAACTGCTCTATGGGGA TCCGATGGTCCAATGTGTCCACCATGCTTTCCAGAATCCATAGGTAACTG GGAACGAAAGGCGCAGATATGGTTGATGATCTTCGAGTTCCAACAAATAA GAGCAATGTATAAAATGATACCATACTCACCAGTCGGAGTTTTGCAACCC GGTGTAAATGGATTAGTGACAAAAAGACGCTTCGAACATCTTAGAGAGCT CTGCAGTGAGCTAATGGAGAGAAGGTGGAAATTGTTTAGCAAACAACCGA CTTCTAATGGTCATCGATCTACCAACTCTCCGGGATCCATGTATGATTGC TCTTTGCTCAGAGATGATATACATAGAGACGCTCTAGGCACTGAGGAAGA ATCATCACGCCTTTATAGCACAGAGTTTTCGCGGCTGCGGAAGCAAGTCT TGGTTCGCCTAGTAGAGAAACTTGCTTCATCTAAACTGAACATGCTTCTC TTTGCGTTTGACGAAAAAATTGCGGACCTCGAACCTCGTAACCCGAACTC ACAAACCAATCGTCGTTTGGCAACTACAAAGGAGTACTGGATAAGGGTTA TGAATCAAGACCATATCCCGCATCATTTTGCGAGAGAGTTGAAGGCATTG GAAGCTGAGGAAAAACGACTATTGGCAGGATTTGACTCCGAGGCGTTGTG GGGCGTCCGACCACGAAAGGAACTTCCATGCAAAAGATATCATGGACATC AAAGCGAAAAGACAGATATAAAAGAAGCCCGATTCTATGGTGCGGATAAT CAAGTGGTTCTATCTGGGTCCGACGACGGTTTTGTTTATATGTGGGCTGC GGGAACCTGCGAACTGCTAACCCGAGTTTCCGCCGACGATCAAATTGTCA ACTGTGTTCTGCCGCACCCCTACCGATCGATGATACTTGTGTCTGGAATA GATAATACGATCAAGGTGTTAACTCCCGATTTATCAAGTAGCGAGGAATG A back to top
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