Ggra9207.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9207.t1
Unique NameGgra9207.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length393
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:387935..389113 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9207Ggra9207Gracilaria gracilis GNS1m malegenetig00000075_pilon 387935..389113 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9207.t1.start1Ggra9207.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000075_pilon 387935..387937 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9207.t1.CDS1Ggra9207.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000075_pilon 387935..389113 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9207.t1.exon1Ggra9207.t1.exon1Gracilaria gracilis GNS1m maleexontig00000075_pilon 387935..389113 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9207.t1.stop1Ggra9207.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000075_pilon 389111..389113 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9207.t1Ggra9207.t1Gracilaria gracilis GNS1m malepolypeptidetig00000075_pilon 387935..389113 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9207.t1 ID=Ggra9207.t1|Name=Ggra9207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=393bp
MANIAPIESKGYDEQGQIPTTETEFVEVKRLNGQKASQIDQSASSLPLEG
SSSSKTLEHHESPGMTPGMTGSHSERKGTNILDWLNLFPEGRKPIWESWG
GGKSPNGSRALFPMQEATGGFLRTFRFGDSANRKDATTSDTENLSNADGP
SNTNEQFQDNSVTRKDTTKHSFPSYSTWKDWKKISVDLYFRLTDNPRNSR
VRLKQTLALLPIAKIKPIIDFGYKGPNQPPISMRLDLKFLDCVKYMIQQD
GNSILQVRAKAPLSDPRFVMDVVYEREMKTSIDTVKISFRAMDIAFLKAP
GFGFGFRFPLRFDNGIKITVGTKKFLGNANASQHVVNTDLFEQAESTYRR
RRNTSKSVSQSRQTSSSSQRKPWFQLRGPTRIDVKIRCLEYR*
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spliced messenger RNA

>Ggra9207.t1 ID=Ggra9207.t1|Name=Ggra9207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1179bp|location=Sequence derived from alignment at tig00000075_pilon:387935..389113+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTAATATCGCCCCAATCGAATCGAAGGGATACGACGAACAAGGTCA
AATTCCGACGACAGAAACAGAATTTGTGGAAGTGAAACGTCTAAACGGAC
AGAAAGCCTCTCAAATAGATCAGAGCGCGTCCTCCCTCCCACTGGAGGGC
AGCTCCAGTTCCAAAACTCTAGAGCACCATGAGAGTCCTGGAATGACCCC
TGGAATGACGGGTTCACACTCGGAAAGAAAGGGCACAAACATTCTTGATT
GGTTAAATCTTTTTCCTGAAGGAAGGAAGCCTATTTGGGAAAGCTGGGGC
GGGGGAAAGAGCCCGAATGGATCCCGAGCTCTATTTCCTATGCAGGAAGC
CACTGGAGGGTTTCTGAGAACATTCCGCTTTGGAGACTCAGCAAACCGAA
AAGACGCTACTACATCTGATACTGAGAATCTCAGCAATGCTGATGGCCCG
TCAAACACTAATGAACAATTTCAAGATAACTCTGTAACTAGGAAAGATAC
AACAAAGCATTCCTTCCCGTCATATTCAACATGGAAAGACTGGAAGAAGA
TCTCCGTTGATCTTTACTTTCGTCTCACTGACAATCCTCGAAACTCGAGA
GTGCGACTGAAGCAAACACTAGCTTTGCTGCCAATAGCCAAAATCAAACC
CATAATTGACTTTGGGTACAAAGGTCCGAACCAGCCCCCTATTAGCATGC
GTCTTGACTTGAAGTTTCTTGACTGTGTCAAGTACATGATTCAACAAGAC
GGAAATTCTATTCTCCAAGTGAGAGCAAAAGCTCCGCTTTCTGACCCGCG
TTTCGTGATGGATGTCGTTTATGAAAGAGAGATGAAGACTTCTATTGACA
CTGTTAAAATATCATTTCGTGCAATGGATATTGCCTTCTTGAAAGCTCCA
GGGTTTGGATTCGGCTTCAGATTTCCACTTCGATTCGATAATGGAATCAA
AATAACAGTTGGGACAAAGAAGTTCCTTGGAAATGCAAATGCTTCTCAAC
ATGTGGTGAACACGGACCTATTCGAACAGGCAGAGAGTACGTATAGAAGG
CGGCGAAATACGTCCAAAAGCGTTTCTCAGTCTCGTCAAACGTCCAGCAG
TTCTCAGAGGAAACCATGGTTCCAGCTTCGTGGCCCAACCAGAATTGACG
TGAAGATAAGATGTCTCGAGTACAGGTAA
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protein sequence of Ggra9207.t1

>Ggra9207.t1 ID=Ggra9207.t1|Name=Ggra9207.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=393bp
MANIAPIESKGYDEQGQIPTTETEFVEVKRLNGQKASQIDQSASSLPLEG
SSSSKTLEHHESPGMTPGMTGSHSERKGTNILDWLNLFPEGRKPIWESWG
GGKSPNGSRALFPMQEATGGFLRTFRFGDSANRKDATTSDTENLSNADGP
SNTNEQFQDNSVTRKDTTKHSFPSYSTWKDWKKISVDLYFRLTDNPRNSR
VRLKQTLALLPIAKIKPIIDFGYKGPNQPPISMRLDLKFLDCVKYMIQQD
GNSILQVRAKAPLSDPRFVMDVVYEREMKTSIDTVKISFRAMDIAFLKAP
GFGFGFRFPLRFDNGIKITVGTKKFLGNANASQHVVNTDLFEQAESTYRR
RRNTSKSVSQSRQTSSSSQRKPWFQLRGPTRIDVKIRCLEYR*
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mRNA from alignment at tig00000075_pilon:387935..389113+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9207.t1 ID=Ggra9207.t1|Name=Ggra9207.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1179bp|location=Sequence derived from alignment at tig00000075_pilon:387935..389113+ (Gracilaria gracilis GNS1m male)
ATGGCTAATATCGCCCCAATCGAATCGAAGGGATACGACGAACAAGGTCA
AATTCCGACGACAGAAACAGAATTTGTGGAAGTGAAACGTCTAAACGGAC
AGAAAGCCTCTCAAATAGATCAGAGCGCGTCCTCCCTCCCACTGGAGGGC
AGCTCCAGTTCCAAAACTCTAGAGCACCATGAGAGTCCTGGAATGACCCC
TGGAATGACGGGTTCACACTCGGAAAGAAAGGGCACAAACATTCTTGATT
GGTTAAATCTTTTTCCTGAAGGAAGGAAGCCTATTTGGGAAAGCTGGGGC
GGGGGAAAGAGCCCGAATGGATCCCGAGCTCTATTTCCTATGCAGGAAGC
CACTGGAGGGTTTCTGAGAACATTCCGCTTTGGAGACTCAGCAAACCGAA
AAGACGCTACTACATCTGATACTGAGAATCTCAGCAATGCTGATGGCCCG
TCAAACACTAATGAACAATTTCAAGATAACTCTGTAACTAGGAAAGATAC
AACAAAGCATTCCTTCCCGTCATATTCAACATGGAAAGACTGGAAGAAGA
TCTCCGTTGATCTTTACTTTCGTCTCACTGACAATCCTCGAAACTCGAGA
GTGCGACTGAAGCAAACACTAGCTTTGCTGCCAATAGCCAAAATCAAACC
CATAATTGACTTTGGGTACAAAGGTCCGAACCAGCCCCCTATTAGCATGC
GTCTTGACTTGAAGTTTCTTGACTGTGTCAAGTACATGATTCAACAAGAC
GGAAATTCTATTCTCCAAGTGAGAGCAAAAGCTCCGCTTTCTGACCCGCG
TTTCGTGATGGATGTCGTTTATGAAAGAGAGATGAAGACTTCTATTGACA
CTGTTAAAATATCATTTCGTGCAATGGATATTGCCTTCTTGAAAGCTCCA
GGGTTTGGATTCGGCTTCAGATTTCCACTTCGATTCGATAATGGAATCAA
AATAACAGTTGGGACAAAGAAGTTCCTTGGAAATGCAAATGCTTCTCAAC
ATGTGGTGAACACGGACCTATTCGAACAGGCAGAGAGTACGTATAGAAGG
CGGCGAAATACGTCCAAAAGCGTTTCTCAGTCTCGTCAAACGTCCAGCAG
TTCTCAGAGGAAACCATGGTTCCAGCTTCGTGGCCCAACCAGAATTGACG
TGAAGATAAGATGTCTCGAGTACAGGTAA
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Coding sequence (CDS) from alignment at tig00000075_pilon:387935..389113+

>Ggra9207.t1 ID=Ggra9207.t1|Name=Ggra9207.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1179bp|location=Sequence derived from alignment at tig00000075_pilon:387935..389113+ (Gracilaria gracilis GNS1m male)
ATGGCTAATATCGCCCCAATCGAATCGAAGGGATACGACGAACAAGGTCA
AATTCCGACGACAGAAACAGAATTTGTGGAAGTGAAACGTCTAAACGGAC
AGAAAGCCTCTCAAATAGATCAGAGCGCGTCCTCCCTCCCACTGGAGGGC
AGCTCCAGTTCCAAAACTCTAGAGCACCATGAGAGTCCTGGAATGACCCC
TGGAATGACGGGTTCACACTCGGAAAGAAAGGGCACAAACATTCTTGATT
GGTTAAATCTTTTTCCTGAAGGAAGGAAGCCTATTTGGGAAAGCTGGGGC
GGGGGAAAGAGCCCGAATGGATCCCGAGCTCTATTTCCTATGCAGGAAGC
CACTGGAGGGTTTCTGAGAACATTCCGCTTTGGAGACTCAGCAAACCGAA
AAGACGCTACTACATCTGATACTGAGAATCTCAGCAATGCTGATGGCCCG
TCAAACACTAATGAACAATTTCAAGATAACTCTGTAACTAGGAAAGATAC
AACAAAGCATTCCTTCCCGTCATATTCAACATGGAAAGACTGGAAGAAGA
TCTCCGTTGATCTTTACTTTCGTCTCACTGACAATCCTCGAAACTCGAGA
GTGCGACTGAAGCAAACACTAGCTTTGCTGCCAATAGCCAAAATCAAACC
CATAATTGACTTTGGGTACAAAGGTCCGAACCAGCCCCCTATTAGCATGC
GTCTTGACTTGAAGTTTCTTGACTGTGTCAAGTACATGATTCAACAAGAC
GGAAATTCTATTCTCCAAGTGAGAGCAAAAGCTCCGCTTTCTGACCCGCG
TTTCGTGATGGATGTCGTTTATGAAAGAGAGATGAAGACTTCTATTGACA
CTGTTAAAATATCATTTCGTGCAATGGATATTGCCTTCTTGAAAGCTCCA
GGGTTTGGATTCGGCTTCAGATTTCCACTTCGATTCGATAATGGAATCAA
AATAACAGTTGGGACAAAGAAGTTCCTTGGAAATGCAAATGCTTCTCAAC
ATGTGGTGAACACGGACCTATTCGAACAGGCAGAGAGTACGTATAGAAGG
CGGCGAAATACGTCCAAAAGCGTTTCTCAGTCTCGTCAAACGTCCAGCAG
TTCTCAGAGGAAACCATGGTTCCAGCTTCGTGGCCCAACCAGAATTGACG
TGAAGATAAGATGTCTCGAGTACAGGTAA
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