Ggra919.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra919.t1
Unique NameGgra919.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length202
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:429048..429653 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra919Ggra919Gracilaria gracilis GNS1m malegenetig00000049_pilon 429048..429653 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra919.t1.stop1Ggra919.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000049_pilon 429048..429050 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra919.t1.CDS1Ggra919.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000049_pilon 429048..429653 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra919.t1.exon1Ggra919.t1.exon1Gracilaria gracilis GNS1m maleexontig00000049_pilon 429048..429653 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra919.t1.start1Ggra919.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000049_pilon 429651..429653 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra919.t1Ggra919.t1Gracilaria gracilis GNS1m malepolypeptidetig00000049_pilon 429048..429653 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra919.t1 ID=Ggra919.t1|Name=Ggra919.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=202bp
MTIAVSLYTAAAVISGFGINGVTVDVYEAFDDRPVLLPALGKRDRPTSKY
GIGFTDSKLGNMYFRAVQCGDVGGKDLSLPLASIPAANGSKLQCVNQKEL
LLDSSMSVVRPPEWDIILSQCSFGELTEVYRLPSEEEGSPDGSPIGLLYS
GGDCLADLNLTCAIGVRKGCAAKVTINDTNMLAVLNPFNGTGHVWDNFGS
G*
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spliced messenger RNA

>Ggra919.t1 ID=Ggra919.t1|Name=Ggra919.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=606bp|location=Sequence derived from alignment at tig00000049_pilon:429048..429653- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGACCATTGCGGTTTCCTTGTACACTGCCGCCGCCGTCATAAGTGGATT
CGGTATCAACGGAGTCACTGTGGATGTTTACGAAGCGTTTGATGACCGCC
CAGTTTTGCTGCCCGCATTGGGCAAACGAGACCGTCCCACCTCCAAGTAC
GGAATAGGATTTACCGACTCCAAGCTTGGAAACATGTACTTCAGGGCCGT
CCAATGTGGTGATGTGGGTGGAAAAGATTTATCATTGCCTCTTGCGTCAA
TTCCAGCGGCAAACGGCTCTAAGTTGCAATGTGTGAATCAGAAAGAACTT
CTGCTGGATTCAAGTATGTCTGTCGTACGCCCACCAGAGTGGGATATAAT
ATTGAGCCAATGTTCGTTTGGAGAATTGACCGAAGTGTATAGGTTACCTT
CTGAAGAAGAAGGGTCGCCTGATGGCTCACCAATAGGTCTTCTCTACTCT
GGTGGTGACTGTCTTGCCGATCTCAACCTCACCTGTGCCATTGGCGTGAG
AAAAGGCTGCGCGGCAAAGGTGACTATAAACGATACAAATATGTTGGCTG
TCCTAAACCCGTTTAATGGCACAGGCCATGTTTGGGACAATTTTGGGAGT
GGCTGA
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protein sequence of Ggra919.t1

>Ggra919.t1 ID=Ggra919.t1|Name=Ggra919.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=202bp
MTIAVSLYTAAAVISGFGINGVTVDVYEAFDDRPVLLPALGKRDRPTSKY
GIGFTDSKLGNMYFRAVQCGDVGGKDLSLPLASIPAANGSKLQCVNQKEL
LLDSSMSVVRPPEWDIILSQCSFGELTEVYRLPSEEEGSPDGSPIGLLYS
GGDCLADLNLTCAIGVRKGCAAKVTINDTNMLAVLNPFNGTGHVWDNFGS
G*
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mRNA from alignment at tig00000049_pilon:429048..429653-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra919.t1 ID=Ggra919.t1|Name=Ggra919.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=606bp|location=Sequence derived from alignment at tig00000049_pilon:429048..429653- (Gracilaria gracilis GNS1m male)
ATGACCATTGCGGTTTCCTTGTACACTGCCGCCGCCGTCATAAGTGGATT
CGGTATCAACGGAGTCACTGTGGATGTTTACGAAGCGTTTGATGACCGCC
CAGTTTTGCTGCCCGCATTGGGCAAACGAGACCGTCCCACCTCCAAGTAC
GGAATAGGATTTACCGACTCCAAGCTTGGAAACATGTACTTCAGGGCCGT
CCAATGTGGTGATGTGGGTGGAAAAGATTTATCATTGCCTCTTGCGTCAA
TTCCAGCGGCAAACGGCTCTAAGTTGCAATGTGTGAATCAGAAAGAACTT
CTGCTGGATTCAAGTATGTCTGTCGTACGCCCACCAGAGTGGGATATAAT
ATTGAGCCAATGTTCGTTTGGAGAATTGACCGAAGTGTATAGGTTACCTT
CTGAAGAAGAAGGGTCGCCTGATGGCTCACCAATAGGTCTTCTCTACTCT
GGTGGTGACTGTCTTGCCGATCTCAACCTCACCTGTGCCATTGGCGTGAG
AAAAGGCTGCGCGGCAAAGGTGACTATAAACGATACAAATATGTTGGCTG
TCCTAAACCCGTTTAATGGCACAGGCCATGTTTGGGACAATTTTGGGAGT
GGCTGA
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Coding sequence (CDS) from alignment at tig00000049_pilon:429048..429653-

>Ggra919.t1 ID=Ggra919.t1|Name=Ggra919.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=606bp|location=Sequence derived from alignment at tig00000049_pilon:429048..429653- (Gracilaria gracilis GNS1m male)
ATGACCATTGCGGTTTCCTTGTACACTGCCGCCGCCGTCATAAGTGGATT
CGGTATCAACGGAGTCACTGTGGATGTTTACGAAGCGTTTGATGACCGCC
CAGTTTTGCTGCCCGCATTGGGCAAACGAGACCGTCCCACCTCCAAGTAC
GGAATAGGATTTACCGACTCCAAGCTTGGAAACATGTACTTCAGGGCCGT
CCAATGTGGTGATGTGGGTGGAAAAGATTTATCATTGCCTCTTGCGTCAA
TTCCAGCGGCAAACGGCTCTAAGTTGCAATGTGTGAATCAGAAAGAACTT
CTGCTGGATTCAAGTATGTCTGTCGTACGCCCACCAGAGTGGGATATAAT
ATTGAGCCAATGTTCGTTTGGAGAATTGACCGAAGTGTATAGGTTACCTT
CTGAAGAAGAAGGGTCGCCTGATGGCTCACCAATAGGTCTTCTCTACTCT
GGTGGTGACTGTCTTGCCGATCTCAACCTCACCTGTGCCATTGGCGTGAG
AAAAGGCTGCGCGGCAAAGGTGACTATAAACGATACAAATATGTTGGCTG
TCCTAAACCCGTTTAATGGCACAGGCCATGTTTGGGACAATTTTGGGAGT
GGCTGA
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