Ggra9071.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9071.t1
Unique NameGgra9071.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length258
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:108121..108894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9071Ggra9071Gracilaria gracilis GNS1m malegenetig00000176_pilon 108121..108894 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9071.t1.stop1Ggra9071.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000176_pilon 108121..108123 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9071.t1.CDS1Ggra9071.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000176_pilon 108121..108894 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9071.t1.exon1Ggra9071.t1.exon1Gracilaria gracilis GNS1m maleexontig00000176_pilon 108121..108894 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9071.t1.start1Ggra9071.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000176_pilon 108892..108894 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9071.t1Ggra9071.t1Gracilaria gracilis GNS1m malepolypeptidetig00000176_pilon 108121..108894 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9071.t1 ID=Ggra9071.t1|Name=Ggra9071.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=258bp
MLALIRSGYPLRRLLYRQLRDSSSEGKLCPHLQISRNVKQVASNPGVNAE
QFRDLFRPPQGKMRQARYKLRWDWHLRNFLTALIPPAAMLVFFQLVALLD
KPHVQLYETRFEGTDPISGNQSVLQTPVEGISPKEPSHPVKEEERYVFLR
KILENRLNRSEGKDPISGKQSGLQTPAEAISSEGRSHTVKEEELHVFLHK
VLQDRLKPLEDELDRLQFLTSELIRKASESTNGPNRVEKARQLSKNMVRS
TAKDEVK*
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spliced messenger RNA

>Ggra9071.t1 ID=Ggra9071.t1|Name=Ggra9071.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=774bp|location=Sequence derived from alignment at tig00000176_pilon:108121..108894- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTGGCACTAATACGATCCGGCTATCCGCTTCGGCGGTTATTATATCG
CCAACTGCGTGATTCCTCGTCCGAAGGAAAACTCTGCCCTCACCTGCAAA
TATCACGCAATGTCAAGCAAGTAGCCTCAAATCCAGGAGTGAACGCCGAG
CAGTTCCGCGATTTGTTCAGACCTCCGCAGGGAAAAATGCGTCAAGCTCG
CTACAAATTACGATGGGACTGGCATCTTCGTAATTTTCTCACCGCCCTCA
TCCCACCAGCTGCCATGCTTGTGTTCTTTCAGCTCGTGGCGTTGCTTGAT
AAGCCACATGTCCAGCTCTATGAGACTCGTTTTGAAGGTACAGATCCCAT
ATCTGGGAACCAATCCGTTCTACAAACTCCAGTTGAAGGTATTTCTCCCA
AAGAGCCTTCTCACCCAGTGAAAGAAGAAGAACGGTATGTCTTCCTTCGC
AAGATATTGGAGAACAGGCTGAATCGTTCTGAAGGTAAAGACCCCATATC
TGGCAAACAATCCGGTTTACAAACTCCAGCTGAAGCTATTTCCTCCGAAG
GACGTTCCCACACAGTGAAAGAAGAAGAGCTTCATGTTTTCCTTCACAAG
GTATTGCAGGACAGGCTGAAGCCTCTTGAGGACGAACTTGACCGTCTGCA
GTTTCTCACAAGTGAATTAATCCGGAAAGCGTCTGAATCAACTAATGGGC
CCAACCGTGTTGAAAAGGCTCGGCAGCTTTCGAAGAACATGGTCAGATCT
ACCGCTAAGGATGAAGTCAAGTAG
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protein sequence of Ggra9071.t1

>Ggra9071.t1 ID=Ggra9071.t1|Name=Ggra9071.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=258bp
MLALIRSGYPLRRLLYRQLRDSSSEGKLCPHLQISRNVKQVASNPGVNAE
QFRDLFRPPQGKMRQARYKLRWDWHLRNFLTALIPPAAMLVFFQLVALLD
KPHVQLYETRFEGTDPISGNQSVLQTPVEGISPKEPSHPVKEEERYVFLR
KILENRLNRSEGKDPISGKQSGLQTPAEAISSEGRSHTVKEEELHVFLHK
VLQDRLKPLEDELDRLQFLTSELIRKASESTNGPNRVEKARQLSKNMVRS
TAKDEVK*
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mRNA from alignment at tig00000176_pilon:108121..108894-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9071.t1 ID=Ggra9071.t1|Name=Ggra9071.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=774bp|location=Sequence derived from alignment at tig00000176_pilon:108121..108894- (Gracilaria gracilis GNS1m male)
ATGTTGGCACTAATACGATCCGGCTATCCGCTTCGGCGGTTATTATATCG
CCAACTGCGTGATTCCTCGTCCGAAGGAAAACTCTGCCCTCACCTGCAAA
TATCACGCAATGTCAAGCAAGTAGCCTCAAATCCAGGAGTGAACGCCGAG
CAGTTCCGCGATTTGTTCAGACCTCCGCAGGGAAAAATGCGTCAAGCTCG
CTACAAATTACGATGGGACTGGCATCTTCGTAATTTTCTCACCGCCCTCA
TCCCACCAGCTGCCATGCTTGTGTTCTTTCAGCTCGTGGCGTTGCTTGAT
AAGCCACATGTCCAGCTCTATGAGACTCGTTTTGAAGGTACAGATCCCAT
ATCTGGGAACCAATCCGTTCTACAAACTCCAGTTGAAGGTATTTCTCCCA
AAGAGCCTTCTCACCCAGTGAAAGAAGAAGAACGGTATGTCTTCCTTCGC
AAGATATTGGAGAACAGGCTGAATCGTTCTGAAGGTAAAGACCCCATATC
TGGCAAACAATCCGGTTTACAAACTCCAGCTGAAGCTATTTCCTCCGAAG
GACGTTCCCACACAGTGAAAGAAGAAGAGCTTCATGTTTTCCTTCACAAG
GTATTGCAGGACAGGCTGAAGCCTCTTGAGGACGAACTTGACCGTCTGCA
GTTTCTCACAAGTGAATTAATCCGGAAAGCGTCTGAATCAACTAATGGGC
CCAACCGTGTTGAAAAGGCTCGGCAGCTTTCGAAGAACATGGTCAGATCT
ACCGCTAAGGATGAAGTCAAGTAG
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Coding sequence (CDS) from alignment at tig00000176_pilon:108121..108894-

>Ggra9071.t1 ID=Ggra9071.t1|Name=Ggra9071.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=774bp|location=Sequence derived from alignment at tig00000176_pilon:108121..108894- (Gracilaria gracilis GNS1m male)
ATGTTGGCACTAATACGATCCGGCTATCCGCTTCGGCGGTTATTATATCG
CCAACTGCGTGATTCCTCGTCCGAAGGAAAACTCTGCCCTCACCTGCAAA
TATCACGCAATGTCAAGCAAGTAGCCTCAAATCCAGGAGTGAACGCCGAG
CAGTTCCGCGATTTGTTCAGACCTCCGCAGGGAAAAATGCGTCAAGCTCG
CTACAAATTACGATGGGACTGGCATCTTCGTAATTTTCTCACCGCCCTCA
TCCCACCAGCTGCCATGCTTGTGTTCTTTCAGCTCGTGGCGTTGCTTGAT
AAGCCACATGTCCAGCTCTATGAGACTCGTTTTGAAGGTACAGATCCCAT
ATCTGGGAACCAATCCGTTCTACAAACTCCAGTTGAAGGTATTTCTCCCA
AAGAGCCTTCTCACCCAGTGAAAGAAGAAGAACGGTATGTCTTCCTTCGC
AAGATATTGGAGAACAGGCTGAATCGTTCTGAAGGTAAAGACCCCATATC
TGGCAAACAATCCGGTTTACAAACTCCAGCTGAAGCTATTTCCTCCGAAG
GACGTTCCCACACAGTGAAAGAAGAAGAGCTTCATGTTTTCCTTCACAAG
GTATTGCAGGACAGGCTGAAGCCTCTTGAGGACGAACTTGACCGTCTGCA
GTTTCTCACAAGTGAATTAATCCGGAAAGCGTCTGAATCAACTAATGGGC
CCAACCGTGTTGAAAAGGCTCGGCAGCTTTCGAAGAACATGGTCAGATCT
ACCGCTAAGGATGAAGTCAAGTAG
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