Ggra9046.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra9046.t1
Unique NameGgra9046.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length804
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000176_piloncontigtig00000176_pilon:33173..35584 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9046Ggra9046Gracilaria gracilis GNS1m malegenetig00000176_pilon 33173..35584 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9046.t1.stop1Ggra9046.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000176_pilon 33173..33175 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9046.t1.CDS1Ggra9046.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000176_pilon 33173..35584 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9046.t1.exon1Ggra9046.t1.exon1Gracilaria gracilis GNS1m maleexontig00000176_pilon 33173..35584 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9046.t1.start1Ggra9046.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000176_pilon 35582..35584 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra9046.t1Ggra9046.t1Gracilaria gracilis GNS1m malepolypeptidetig00000176_pilon 33173..35584 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra9046.t1 ID=Ggra9046.t1|Name=Ggra9046.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=804bp
MPRVADAELTAAALELLAARRDAPPCNARLTLLAGALRDSLNAPHAQLRA
ALRALAPVVALRRASHAPLLALHVAPALLRAAAVSHCAADALNVLAALLA
APPPPAVAPERLAPAVAQLAMPLLRAPLLGVSAAHDDQDEDDDAAAAAAL
RALGALARLDACARCSALSERALLSAVHSALLRAVHTARASLVAEAAAFL
SALLRARHAQLRRTLRDLRMSQLLLRALPLRACRASVLRFVAELLRAPRG
GAPPSSPPPPELPPAQLLPPLNAALRAADARELHAAVQLLLALPPRHAAP
RALLPPLLAALPRVSPPALPDALALLARLLSGSVRLARLAHAACAARCLS
DAARAHAHHVRVMYPALLALRHLIHCYDRNRAAAVAANLPQLVLLALVQH
ASHAHVVAAAANVFILLAPADLLAADVALPPLASLLQARLALHAAHPVAA
PALRHLLAALALVEPRPPDASVADATAAAATAAAAAATTDTAAVAPRTLS
SAGLLRRRASSTRRVVSDFDARRLATLDVPTRSAKRTRKPPRVAPAEPSQ
EPLADLLARHRAHSLAASEHDASFHSHADLPRSASVLLPSPSRFADDGPS
SLPDWPSFRPRFVPPRSLSFDTDEDSDDGSDDDSDFTSNGSFSLSSSESG
SFEPLHAQYVNSRQPSELHDALRTLSDINEPQSDSFSTSVAGLPLRNSDV
RESSTVTDSAETMDDADVVEESEFPHLASRVFQRAYAKHVGESGADMLHG
AKRFAERERNNGTGARPQWSIWPFHSAEENTSLRSNSGRSQTRGESGTIR
GRQ*
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spliced messenger RNA

>Ggra9046.t1 ID=Ggra9046.t1|Name=Ggra9046.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2412bp|location=Sequence derived from alignment at tig00000176_pilon:33173..35584- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCGCGTGGCGGACGCCGAGCTCACGGCCGCCGCGCTGGAGCTGCT
GGCCGCACGACGCGATGCGCCGCCGTGCAACGCGCGTCTAACGCTGCTGG
CGGGCGCGCTGCGCGACTCGCTCAACGCGCCGCACGCGCAGCTACGCGCC
GCGCTGCGCGCGCTGGCGCCCGTGGTGGCGCTGCGCCGCGCGTCACACGC
GCCGTTGCTGGCGCTGCACGTCGCGCCCGCGCTGCTACGCGCCGCCGCCG
TGTCGCACTGCGCCGCCGACGCGCTTAACGTACTGGCCGCGCTGCTGGCC
GCGCCGCCGCCGCCGGCCGTGGCGCCGGAGCGGCTGGCGCCGGCCGTGGC
GCAGCTGGCCATGCCACTGCTACGCGCGCCGCTGCTGGGCGTGAGCGCGG
CGCACGACGACCAAGACGAAGACGACGACGCGGCGGCGGCGGCGGCGCTA
CGCGCGCTCGGCGCGCTGGCGCGGCTGGACGCATGCGCGCGCTGCAGCGC
GCTGAGCGAACGCGCGCTACTGAGCGCCGTGCACTCGGCGTTGCTGCGCG
CCGTGCACACGGCGCGCGCTTCGCTGGTAGCCGAGGCGGCCGCCTTCCTC
AGCGCGCTGCTCCGCGCGCGCCACGCGCAGCTGCGGCGCACGCTGCGCGA
CCTGCGCATGTCGCAGCTGCTGCTACGCGCGCTGCCGCTGCGCGCGTGTC
GCGCCTCCGTGCTGCGCTTCGTGGCCGAGCTGCTGCGCGCACCGCGCGGC
GGCGCACCGCCGTCGTCGCCGCCGCCGCCGGAGCTGCCGCCCGCGCAGCT
GCTGCCGCCGCTGAACGCCGCGCTGCGCGCCGCCGACGCGCGCGAGCTGC
ACGCGGCCGTGCAGCTGCTGTTGGCGTTGCCGCCGCGACATGCGGCGCCG
CGCGCGCTGCTACCGCCGCTGCTGGCCGCGCTGCCGCGCGTGTCGCCGCC
GGCGCTGCCCGACGCGCTGGCGCTGCTCGCGCGGCTGCTCAGCGGCAGCG
TGCGGCTGGCGCGGCTAGCGCACGCCGCGTGCGCGGCGCGCTGTCTGTCC
GACGCCGCGCGCGCGCACGCGCACCATGTGCGCGTCATGTACCCCGCGCT
GCTTGCGCTGCGTCACCTCATCCATTGCTACGACCGCAACCGCGCCGCCG
CCGTCGCCGCCAACCTGCCGCAGCTCGTGTTGCTCGCGCTGGTGCAACAC
GCGTCGCACGCGCATGTCGTCGCTGCCGCCGCCAACGTCTTCATCCTGCT
GGCGCCTGCCGACCTGCTCGCCGCGGACGTTGCGCTGCCGCCGCTGGCTA
GCCTGCTGCAGGCGCGACTCGCGCTGCACGCCGCTCACCCTGTGGCCGCC
CCCGCGCTGCGTCACCTGCTGGCCGCGCTCGCGCTCGTCGAGCCGCGCCC
GCCCGATGCCTCCGTCGCCGACGCTACCGCTGCTGCTGCCACTGCTGCCG
CCGCCGCTGCCACCACCGACACCGCCGCTGTGGCGCCGCGCACGCTCAGC
TCCGCTGGCTTGTTGCGCCGCCGCGCGTCGTCCACGCGCCGCGTCGTGTC
CGACTTTGACGCGCGCCGACTCGCCACGCTGGACGTGCCCACGCGCTCGG
CCAAGCGCACGCGCAAGCCGCCGCGCGTCGCCCCCGCCGAGCCCAGCCAG
GAGCCGCTGGCCGACCTGTTGGCGCGCCACCGCGCGCACTCGCTCGCTGC
ATCGGAGCATGACGCCTCCTTCCACTCGCACGCCGACCTGCCGCGCAGCG
CGTCGGTGCTGCTGCCGTCGCCAAGCCGCTTCGCGGACGATGGCCCCTCC
AGCCTGCCGGATTGGCCCTCGTTCAGGCCGCGCTTTGTGCCGCCGCGCTC
GCTTAGCTTCGACACCGATGAGGACTCCGATGACGGAAGCGACGACGATA
GCGATTTTACAAGCAACGGCTCCTTCTCGCTGTCGTCGTCCGAGTCGGGT
AGCTTTGAGCCGCTGCACGCGCAGTACGTCAACTCTAGACAGCCTTCTGA
GCTGCACGATGCGTTGCGTACGCTTAGCGATATCAACGAGCCGCAGTCCG
ACTCGTTCAGCACCAGCGTGGCGGGGCTGCCGCTGCGCAACAGTGACGTG
CGCGAGTCGTCCACCGTCACCGACAGCGCGGAAACCATGGATGACGCTGA
CGTTGTGGAGGAGAGCGAGTTTCCGCACCTTGCGTCTCGTGTGTTCCAGC
GCGCCTATGCCAAGCATGTTGGCGAGAGCGGCGCTGATATGTTGCATGGC
GCCAAGCGCTTTGCTGAACGCGAGAGAAACAATGGCACGGGCGCCCGTCC
GCAGTGGAGCATTTGGCCGTTTCACTCCGCGGAGGAGAATACTTCTCTCA
GGAGCAACTCCGGGCGTTCGCAGACCAGAGGCGAAAGCGGCACCATCCGA
GGCAGACAATAA
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protein sequence of Ggra9046.t1

>Ggra9046.t1 ID=Ggra9046.t1|Name=Ggra9046.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=804bp
MPRVADAELTAAALELLAARRDAPPCNARLTLLAGALRDSLNAPHAQLRA
ALRALAPVVALRRASHAPLLALHVAPALLRAAAVSHCAADALNVLAALLA
APPPPAVAPERLAPAVAQLAMPLLRAPLLGVSAAHDDQDEDDDAAAAAAL
RALGALARLDACARCSALSERALLSAVHSALLRAVHTARASLVAEAAAFL
SALLRARHAQLRRTLRDLRMSQLLLRALPLRACRASVLRFVAELLRAPRG
GAPPSSPPPPELPPAQLLPPLNAALRAADARELHAAVQLLLALPPRHAAP
RALLPPLLAALPRVSPPALPDALALLARLLSGSVRLARLAHAACAARCLS
DAARAHAHHVRVMYPALLALRHLIHCYDRNRAAAVAANLPQLVLLALVQH
ASHAHVVAAAANVFILLAPADLLAADVALPPLASLLQARLALHAAHPVAA
PALRHLLAALALVEPRPPDASVADATAAAATAAAAAATTDTAAVAPRTLS
SAGLLRRRASSTRRVVSDFDARRLATLDVPTRSAKRTRKPPRVAPAEPSQ
EPLADLLARHRAHSLAASEHDASFHSHADLPRSASVLLPSPSRFADDGPS
SLPDWPSFRPRFVPPRSLSFDTDEDSDDGSDDDSDFTSNGSFSLSSSESG
SFEPLHAQYVNSRQPSELHDALRTLSDINEPQSDSFSTSVAGLPLRNSDV
RESSTVTDSAETMDDADVVEESEFPHLASRVFQRAYAKHVGESGADMLHG
AKRFAERERNNGTGARPQWSIWPFHSAEENTSLRSNSGRSQTRGESGTIR
GRQ*
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mRNA from alignment at tig00000176_pilon:33173..35584-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra9046.t1 ID=Ggra9046.t1|Name=Ggra9046.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2412bp|location=Sequence derived from alignment at tig00000176_pilon:33173..35584- (Gracilaria gracilis GNS1m male)
ATGCCGCGCGTGGCGGACGCCGAGCTCACGGCCGCCGCGCTGGAGCTGCT
GGCCGCACGACGCGATGCGCCGCCGTGCAACGCGCGTCTAACGCTGCTGG
CGGGCGCGCTGCGCGACTCGCTCAACGCGCCGCACGCGCAGCTACGCGCC
GCGCTGCGCGCGCTGGCGCCCGTGGTGGCGCTGCGCCGCGCGTCACACGC
GCCGTTGCTGGCGCTGCACGTCGCGCCCGCGCTGCTACGCGCCGCCGCCG
TGTCGCACTGCGCCGCCGACGCGCTTAACGTACTGGCCGCGCTGCTGGCC
GCGCCGCCGCCGCCGGCCGTGGCGCCGGAGCGGCTGGCGCCGGCCGTGGC
GCAGCTGGCCATGCCACTGCTACGCGCGCCGCTGCTGGGCGTGAGCGCGG
CGCACGACGACCAAGACGAAGACGACGACGCGGCGGCGGCGGCGGCGCTA
CGCGCGCTCGGCGCGCTGGCGCGGCTGGACGCATGCGCGCGCTGCAGCGC
GCTGAGCGAACGCGCGCTACTGAGCGCCGTGCACTCGGCGTTGCTGCGCG
CCGTGCACACGGCGCGCGCTTCGCTGGTAGCCGAGGCGGCCGCCTTCCTC
AGCGCGCTGCTCCGCGCGCGCCACGCGCAGCTGCGGCGCACGCTGCGCGA
CCTGCGCATGTCGCAGCTGCTGCTACGCGCGCTGCCGCTGCGCGCGTGTC
GCGCCTCCGTGCTGCGCTTCGTGGCCGAGCTGCTGCGCGCACCGCGCGGC
GGCGCACCGCCGTCGTCGCCGCCGCCGCCGGAGCTGCCGCCCGCGCAGCT
GCTGCCGCCGCTGAACGCCGCGCTGCGCGCCGCCGACGCGCGCGAGCTGC
ACGCGGCCGTGCAGCTGCTGTTGGCGTTGCCGCCGCGACATGCGGCGCCG
CGCGCGCTGCTACCGCCGCTGCTGGCCGCGCTGCCGCGCGTGTCGCCGCC
GGCGCTGCCCGACGCGCTGGCGCTGCTCGCGCGGCTGCTCAGCGGCAGCG
TGCGGCTGGCGCGGCTAGCGCACGCCGCGTGCGCGGCGCGCTGTCTGTCC
GACGCCGCGCGCGCGCACGCGCACCATGTGCGCGTCATGTACCCCGCGCT
GCTTGCGCTGCGTCACCTCATCCATTGCTACGACCGCAACCGCGCCGCCG
CCGTCGCCGCCAACCTGCCGCAGCTCGTGTTGCTCGCGCTGGTGCAACAC
GCGTCGCACGCGCATGTCGTCGCTGCCGCCGCCAACGTCTTCATCCTGCT
GGCGCCTGCCGACCTGCTCGCCGCGGACGTTGCGCTGCCGCCGCTGGCTA
GCCTGCTGCAGGCGCGACTCGCGCTGCACGCCGCTCACCCTGTGGCCGCC
CCCGCGCTGCGTCACCTGCTGGCCGCGCTCGCGCTCGTCGAGCCGCGCCC
GCCCGATGCCTCCGTCGCCGACGCTACCGCTGCTGCTGCCACTGCTGCCG
CCGCCGCTGCCACCACCGACACCGCCGCTGTGGCGCCGCGCACGCTCAGC
TCCGCTGGCTTGTTGCGCCGCCGCGCGTCGTCCACGCGCCGCGTCGTGTC
CGACTTTGACGCGCGCCGACTCGCCACGCTGGACGTGCCCACGCGCTCGG
CCAAGCGCACGCGCAAGCCGCCGCGCGTCGCCCCCGCCGAGCCCAGCCAG
GAGCCGCTGGCCGACCTGTTGGCGCGCCACCGCGCGCACTCGCTCGCTGC
ATCGGAGCATGACGCCTCCTTCCACTCGCACGCCGACCTGCCGCGCAGCG
CGTCGGTGCTGCTGCCGTCGCCAAGCCGCTTCGCGGACGATGGCCCCTCC
AGCCTGCCGGATTGGCCCTCGTTCAGGCCGCGCTTTGTGCCGCCGCGCTC
GCTTAGCTTCGACACCGATGAGGACTCCGATGACGGAAGCGACGACGATA
GCGATTTTACAAGCAACGGCTCCTTCTCGCTGTCGTCGTCCGAGTCGGGT
AGCTTTGAGCCGCTGCACGCGCAGTACGTCAACTCTAGACAGCCTTCTGA
GCTGCACGATGCGTTGCGTACGCTTAGCGATATCAACGAGCCGCAGTCCG
ACTCGTTCAGCACCAGCGTGGCGGGGCTGCCGCTGCGCAACAGTGACGTG
CGCGAGTCGTCCACCGTCACCGACAGCGCGGAAACCATGGATGACGCTGA
CGTTGTGGAGGAGAGCGAGTTTCCGCACCTTGCGTCTCGTGTGTTCCAGC
GCGCCTATGCCAAGCATGTTGGCGAGAGCGGCGCTGATATGTTGCATGGC
GCCAAGCGCTTTGCTGAACGCGAGAGAAACAATGGCACGGGCGCCCGTCC
GCAGTGGAGCATTTGGCCGTTTCACTCCGCGGAGGAGAATACTTCTCTCA
GGAGCAACTCCGGGCGTTCGCAGACCAGAGGCGAAAGCGGCACCATCCGA
GGCAGACAATAA
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Coding sequence (CDS) from alignment at tig00000176_pilon:33173..35584-

>Ggra9046.t1 ID=Ggra9046.t1|Name=Ggra9046.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2412bp|location=Sequence derived from alignment at tig00000176_pilon:33173..35584- (Gracilaria gracilis GNS1m male)
ATGCCGCGCGTGGCGGACGCCGAGCTCACGGCCGCCGCGCTGGAGCTGCT
GGCCGCACGACGCGATGCGCCGCCGTGCAACGCGCGTCTAACGCTGCTGG
CGGGCGCGCTGCGCGACTCGCTCAACGCGCCGCACGCGCAGCTACGCGCC
GCGCTGCGCGCGCTGGCGCCCGTGGTGGCGCTGCGCCGCGCGTCACACGC
GCCGTTGCTGGCGCTGCACGTCGCGCCCGCGCTGCTACGCGCCGCCGCCG
TGTCGCACTGCGCCGCCGACGCGCTTAACGTACTGGCCGCGCTGCTGGCC
GCGCCGCCGCCGCCGGCCGTGGCGCCGGAGCGGCTGGCGCCGGCCGTGGC
GCAGCTGGCCATGCCACTGCTACGCGCGCCGCTGCTGGGCGTGAGCGCGG
CGCACGACGACCAAGACGAAGACGACGACGCGGCGGCGGCGGCGGCGCTA
CGCGCGCTCGGCGCGCTGGCGCGGCTGGACGCATGCGCGCGCTGCAGCGC
GCTGAGCGAACGCGCGCTACTGAGCGCCGTGCACTCGGCGTTGCTGCGCG
CCGTGCACACGGCGCGCGCTTCGCTGGTAGCCGAGGCGGCCGCCTTCCTC
AGCGCGCTGCTCCGCGCGCGCCACGCGCAGCTGCGGCGCACGCTGCGCGA
CCTGCGCATGTCGCAGCTGCTGCTACGCGCGCTGCCGCTGCGCGCGTGTC
GCGCCTCCGTGCTGCGCTTCGTGGCCGAGCTGCTGCGCGCACCGCGCGGC
GGCGCACCGCCGTCGTCGCCGCCGCCGCCGGAGCTGCCGCCCGCGCAGCT
GCTGCCGCCGCTGAACGCCGCGCTGCGCGCCGCCGACGCGCGCGAGCTGC
ACGCGGCCGTGCAGCTGCTGTTGGCGTTGCCGCCGCGACATGCGGCGCCG
CGCGCGCTGCTACCGCCGCTGCTGGCCGCGCTGCCGCGCGTGTCGCCGCC
GGCGCTGCCCGACGCGCTGGCGCTGCTCGCGCGGCTGCTCAGCGGCAGCG
TGCGGCTGGCGCGGCTAGCGCACGCCGCGTGCGCGGCGCGCTGTCTGTCC
GACGCCGCGCGCGCGCACGCGCACCATGTGCGCGTCATGTACCCCGCGCT
GCTTGCGCTGCGTCACCTCATCCATTGCTACGACCGCAACCGCGCCGCCG
CCGTCGCCGCCAACCTGCCGCAGCTCGTGTTGCTCGCGCTGGTGCAACAC
GCGTCGCACGCGCATGTCGTCGCTGCCGCCGCCAACGTCTTCATCCTGCT
GGCGCCTGCCGACCTGCTCGCCGCGGACGTTGCGCTGCCGCCGCTGGCTA
GCCTGCTGCAGGCGCGACTCGCGCTGCACGCCGCTCACCCTGTGGCCGCC
CCCGCGCTGCGTCACCTGCTGGCCGCGCTCGCGCTCGTCGAGCCGCGCCC
GCCCGATGCCTCCGTCGCCGACGCTACCGCTGCTGCTGCCACTGCTGCCG
CCGCCGCTGCCACCACCGACACCGCCGCTGTGGCGCCGCGCACGCTCAGC
TCCGCTGGCTTGTTGCGCCGCCGCGCGTCGTCCACGCGCCGCGTCGTGTC
CGACTTTGACGCGCGCCGACTCGCCACGCTGGACGTGCCCACGCGCTCGG
CCAAGCGCACGCGCAAGCCGCCGCGCGTCGCCCCCGCCGAGCCCAGCCAG
GAGCCGCTGGCCGACCTGTTGGCGCGCCACCGCGCGCACTCGCTCGCTGC
ATCGGAGCATGACGCCTCCTTCCACTCGCACGCCGACCTGCCGCGCAGCG
CGTCGGTGCTGCTGCCGTCGCCAAGCCGCTTCGCGGACGATGGCCCCTCC
AGCCTGCCGGATTGGCCCTCGTTCAGGCCGCGCTTTGTGCCGCCGCGCTC
GCTTAGCTTCGACACCGATGAGGACTCCGATGACGGAAGCGACGACGATA
GCGATTTTACAAGCAACGGCTCCTTCTCGCTGTCGTCGTCCGAGTCGGGT
AGCTTTGAGCCGCTGCACGCGCAGTACGTCAACTCTAGACAGCCTTCTGA
GCTGCACGATGCGTTGCGTACGCTTAGCGATATCAACGAGCCGCAGTCCG
ACTCGTTCAGCACCAGCGTGGCGGGGCTGCCGCTGCGCAACAGTGACGTG
CGCGAGTCGTCCACCGTCACCGACAGCGCGGAAACCATGGATGACGCTGA
CGTTGTGGAGGAGAGCGAGTTTCCGCACCTTGCGTCTCGTGTGTTCCAGC
GCGCCTATGCCAAGCATGTTGGCGAGAGCGGCGCTGATATGTTGCATGGC
GCCAAGCGCTTTGCTGAACGCGAGAGAAACAATGGCACGGGCGCCCGTCC
GCAGTGGAGCATTTGGCCGTTTCACTCCGCGGAGGAGAATACTTCTCTCA
GGAGCAACTCCGGGCGTTCGCAGACCAGAGGCGAAAGCGGCACCATCCGA
GGCAGACAATAA
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