Ggra8993.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8993.t1
Unique NameGgra8993.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length140
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1075947..1076366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8993Ggra8993Gracilaria gracilis GNS1m malegenetig00000860_pilon 1075947..1076366 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8993.t1.stop1Ggra8993.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 1075947..1075949 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8993.t1.CDS1Ggra8993.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 1075947..1076366 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8993.t1.exon1Ggra8993.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 1075947..1076366 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8993.t1.start1Ggra8993.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 1076364..1076366 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8993.t1Ggra8993.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 1075947..1076366 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8993.t1 ID=Ggra8993.t1|Name=Ggra8993.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=140bp
MGVIVSRYLDARCNEGAIIKFVIDSVKLINTVVTSDTPFTDLTPWNVIHL
EDDLRTHHTSSADGGNNGDGDGDGDEAAWWWWWWRWLWCDAAHQRASLLP
RASPRRKQQQQQQQQQQQRGCDDDLFYMLCAAHVPHERL*
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spliced messenger RNA

>Ggra8993.t1 ID=Ggra8993.t1|Name=Ggra8993.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=420bp|location=Sequence derived from alignment at tig00000860_pilon:1075947..1076366- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGGCGTCATCGTGTCGAGGTACCTGGACGCGCGCTGCAACGAGGGCGC
CATCATCAAGTTTGTGATTGACAGCGTCAAGCTCATCAACACCGTCGTCA
CGTCGGACACGCCGTTCACCGACCTGACGCCGTGGAACGTGATCCACCTG
GAGGACGACCTGCGCACGCACCATACGTCCAGCGCCGACGGCGGCAACAA
CGGCGACGGCGACGGCGACGGCGACGAGGCGGCGTGGTGGTGGTGGTGGT
GGCGATGGCTATGGTGCGACGCTGCGCATCAACGCGCGTCGCTGCTGCCG
CGCGCGTCGCCGCGCCGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCGCGGCTGCGACGACGACCTATTTTACATGCTGTGCGCGGCGCACG
TGCCGCACGAGCGGCTGTAG
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protein sequence of Ggra8993.t1

>Ggra8993.t1 ID=Ggra8993.t1|Name=Ggra8993.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=140bp
MGVIVSRYLDARCNEGAIIKFVIDSVKLINTVVTSDTPFTDLTPWNVIHL
EDDLRTHHTSSADGGNNGDGDGDGDEAAWWWWWWRWLWCDAAHQRASLLP
RASPRRKQQQQQQQQQQQRGCDDDLFYMLCAAHVPHERL*
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mRNA from alignment at tig00000860_pilon:1075947..1076366-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8993.t1 ID=Ggra8993.t1|Name=Ggra8993.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=420bp|location=Sequence derived from alignment at tig00000860_pilon:1075947..1076366- (Gracilaria gracilis GNS1m male)
ATGGGCGTCATCGTGTCGAGGTACCTGGACGCGCGCTGCAACGAGGGCGC
CATCATCAAGTTTGTGATTGACAGCGTCAAGCTCATCAACACCGTCGTCA
CGTCGGACACGCCGTTCACCGACCTGACGCCGTGGAACGTGATCCACCTG
GAGGACGACCTGCGCACGCACCATACGTCCAGCGCCGACGGCGGCAACAA
CGGCGACGGCGACGGCGACGGCGACGAGGCGGCGTGGTGGTGGTGGTGGT
GGCGATGGCTATGGTGCGACGCTGCGCATCAACGCGCGTCGCTGCTGCCG
CGCGCGTCGCCGCGCCGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCGCGGCTGCGACGACGACCTATTTTACATGCTGTGCGCGGCGCACG
TGCCGCACGAGCGGCTGTAG
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Coding sequence (CDS) from alignment at tig00000860_pilon:1075947..1076366-

>Ggra8993.t1 ID=Ggra8993.t1|Name=Ggra8993.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=420bp|location=Sequence derived from alignment at tig00000860_pilon:1075947..1076366- (Gracilaria gracilis GNS1m male)
ATGGGCGTCATCGTGTCGAGGTACCTGGACGCGCGCTGCAACGAGGGCGC
CATCATCAAGTTTGTGATTGACAGCGTCAAGCTCATCAACACCGTCGTCA
CGTCGGACACGCCGTTCACCGACCTGACGCCGTGGAACGTGATCCACCTG
GAGGACGACCTGCGCACGCACCATACGTCCAGCGCCGACGGCGGCAACAA
CGGCGACGGCGACGGCGACGGCGACGAGGCGGCGTGGTGGTGGTGGTGGT
GGCGATGGCTATGGTGCGACGCTGCGCATCAACGCGCGTCGCTGCTGCCG
CGCGCGTCGCCGCGCCGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCGCGGCTGCGACGACGACCTATTTTACATGCTGTGCGCGGCGCACG
TGCCGCACGAGCGGCTGTAG
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