Ggra8985.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8985.t1
Unique NameGgra8985.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1055960..1056712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8985Ggra8985Gracilaria gracilis GNS1m malegenetig00000860_pilon 1055960..1056712 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8985.t1.stop1Ggra8985.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000860_pilon 1055960..1055962 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8985.t1.CDS1Ggra8985.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000860_pilon 1055960..1056712 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8985.t1.exon1Ggra8985.t1.exon1Gracilaria gracilis GNS1m maleexontig00000860_pilon 1055960..1056712 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8985.t1.start1Ggra8985.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000860_pilon 1056710..1056712 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8985.t1Ggra8985.t1Gracilaria gracilis GNS1m malepolypeptidetig00000860_pilon 1055960..1056712 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8985.t1 ID=Ggra8985.t1|Name=Ggra8985.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=251bp
MNGASAGMGAGGLEGGGSAASTASEGGLSVAGGMGGGFNNNGMRRGAGGG
GSGSVGNAAGSGIGGTGASRSQALAADSESLGFASGSHSGDGSSGFGLHG
SFATPQPLFENGLGAGSASQSGTGGGGTGIGTGRGGSGQGVGQGHGEHSS
SKRTRTAGLSTGEGGAAAGSSGGSDAGISTANADGTFQMPGMGIALGSSG
IGGTTSATGVGGSGSGSAAGISRRATFSRIQERSHPRFRYHSKRKETQYR
*
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spliced messenger RNA

>Ggra8985.t1 ID=Ggra8985.t1|Name=Ggra8985.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=753bp|location=Sequence derived from alignment at tig00000860_pilon:1055960..1056712- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATGGAGCATCAGCAGGAATGGGAGCAGGTGGGTTAGAAGGAGGAGG
TTCAGCTGCCTCTACCGCCAGTGAAGGAGGGCTTAGTGTTGCTGGAGGGA
TGGGGGGCGGATTCAACAACAATGGGATGCGAAGAGGAGCCGGTGGAGGG
GGCAGTGGCTCAGTCGGAAATGCTGCGGGCTCAGGTATCGGTGGAACCGG
GGCGTCCAGGTCTCAAGCATTGGCTGCAGACTCGGAGAGTCTTGGATTCG
CATCGGGAAGTCATTCGGGGGATGGATCTTCCGGATTTGGTTTACATGGC
AGTTTTGCAACCCCGCAGCCATTGTTCGAAAATGGATTAGGAGCCGGTTC
AGCCTCCCAGTCTGGCACGGGTGGGGGTGGAACCGGTATCGGTACTGGGA
GGGGTGGCAGTGGACAAGGTGTTGGACAAGGTCATGGAGAGCATAGCTCT
TCGAAGAGGACACGAACTGCTGGGCTTTCAACGGGAGAAGGGGGTGCAGC
GGCTGGAAGCAGCGGTGGTTCCGATGCTGGTATTAGTACTGCGAATGCAG
ATGGAACGTTCCAGATGCCAGGTATGGGGATTGCACTGGGAAGTTCTGGA
ATAGGGGGAACAACAAGTGCGACAGGTGTTGGTGGAAGTGGATCTGGCAG
TGCCGCTGGAATTTCTCGGAGGGCTACTTTCTCAAGAATCCAGGAAAGGA
GCCACCCGCGATTCCGATATCATTCGAAGCGGAAGGAGACCCAATATCGA
TAA
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protein sequence of Ggra8985.t1

>Ggra8985.t1 ID=Ggra8985.t1|Name=Ggra8985.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MNGASAGMGAGGLEGGGSAASTASEGGLSVAGGMGGGFNNNGMRRGAGGG
GSGSVGNAAGSGIGGTGASRSQALAADSESLGFASGSHSGDGSSGFGLHG
SFATPQPLFENGLGAGSASQSGTGGGGTGIGTGRGGSGQGVGQGHGEHSS
SKRTRTAGLSTGEGGAAAGSSGGSDAGISTANADGTFQMPGMGIALGSSG
IGGTTSATGVGGSGSGSAAGISRRATFSRIQERSHPRFRYHSKRKETQYR
*
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mRNA from alignment at tig00000860_pilon:1055960..1056712-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8985.t1 ID=Ggra8985.t1|Name=Ggra8985.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=753bp|location=Sequence derived from alignment at tig00000860_pilon:1055960..1056712- (Gracilaria gracilis GNS1m male)
ATGAATGGAGCATCAGCAGGAATGGGAGCAGGTGGGTTAGAAGGAGGAGG
TTCAGCTGCCTCTACCGCCAGTGAAGGAGGGCTTAGTGTTGCTGGAGGGA
TGGGGGGCGGATTCAACAACAATGGGATGCGAAGAGGAGCCGGTGGAGGG
GGCAGTGGCTCAGTCGGAAATGCTGCGGGCTCAGGTATCGGTGGAACCGG
GGCGTCCAGGTCTCAAGCATTGGCTGCAGACTCGGAGAGTCTTGGATTCG
CATCGGGAAGTCATTCGGGGGATGGATCTTCCGGATTTGGTTTACATGGC
AGTTTTGCAACCCCGCAGCCATTGTTCGAAAATGGATTAGGAGCCGGTTC
AGCCTCCCAGTCTGGCACGGGTGGGGGTGGAACCGGTATCGGTACTGGGA
GGGGTGGCAGTGGACAAGGTGTTGGACAAGGTCATGGAGAGCATAGCTCT
TCGAAGAGGACACGAACTGCTGGGCTTTCAACGGGAGAAGGGGGTGCAGC
GGCTGGAAGCAGCGGTGGTTCCGATGCTGGTATTAGTACTGCGAATGCAG
ATGGAACGTTCCAGATGCCAGGTATGGGGATTGCACTGGGAAGTTCTGGA
ATAGGGGGAACAACAAGTGCGACAGGTGTTGGTGGAAGTGGATCTGGCAG
TGCCGCTGGAATTTCTCGGAGGGCTACTTTCTCAAGAATCCAGGAAAGGA
GCCACCCGCGATTCCGATATCATTCGAAGCGGAAGGAGACCCAATATCGA
TAA
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Coding sequence (CDS) from alignment at tig00000860_pilon:1055960..1056712-

>Ggra8985.t1 ID=Ggra8985.t1|Name=Ggra8985.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=753bp|location=Sequence derived from alignment at tig00000860_pilon:1055960..1056712- (Gracilaria gracilis GNS1m male)
ATGAATGGAGCATCAGCAGGAATGGGAGCAGGTGGGTTAGAAGGAGGAGG
TTCAGCTGCCTCTACCGCCAGTGAAGGAGGGCTTAGTGTTGCTGGAGGGA
TGGGGGGCGGATTCAACAACAATGGGATGCGAAGAGGAGCCGGTGGAGGG
GGCAGTGGCTCAGTCGGAAATGCTGCGGGCTCAGGTATCGGTGGAACCGG
GGCGTCCAGGTCTCAAGCATTGGCTGCAGACTCGGAGAGTCTTGGATTCG
CATCGGGAAGTCATTCGGGGGATGGATCTTCCGGATTTGGTTTACATGGC
AGTTTTGCAACCCCGCAGCCATTGTTCGAAAATGGATTAGGAGCCGGTTC
AGCCTCCCAGTCTGGCACGGGTGGGGGTGGAACCGGTATCGGTACTGGGA
GGGGTGGCAGTGGACAAGGTGTTGGACAAGGTCATGGAGAGCATAGCTCT
TCGAAGAGGACACGAACTGCTGGGCTTTCAACGGGAGAAGGGGGTGCAGC
GGCTGGAAGCAGCGGTGGTTCCGATGCTGGTATTAGTACTGCGAATGCAG
ATGGAACGTTCCAGATGCCAGGTATGGGGATTGCACTGGGAAGTTCTGGA
ATAGGGGGAACAACAAGTGCGACAGGTGTTGGTGGAAGTGGATCTGGCAG
TGCCGCTGGAATTTCTCGGAGGGCTACTTTCTCAAGAATCCAGGAAAGGA
GCCACCCGCGATTCCGATATCATTCGAAGCGGAAGGAGACCCAATATCGA
TAA
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