Ggra8751.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8751.t1
Unique NameGgra8751.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length304
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000127_piloncontigtig00000127_pilon:89042..89953 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8751Ggra8751Gracilaria gracilis GNS1m malegenetig00000127_pilon 89042..89953 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8751.t1.stop1Ggra8751.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000127_pilon 89042..89044 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8751.t1.CDS1Ggra8751.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000127_pilon 89042..89953 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8751.t1.exon1Ggra8751.t1.exon1Gracilaria gracilis GNS1m maleexontig00000127_pilon 89042..89953 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8751.t1.start1Ggra8751.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000127_pilon 89951..89953 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8751.t1Ggra8751.t1Gracilaria gracilis GNS1m malepolypeptidetig00000127_pilon 89042..89953 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8751.t1 ID=Ggra8751.t1|Name=Ggra8751.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=304bp
MLPKTLHELPVVALFPFMIHSVLYFVIGGDPDPNRCVEIMRNCLPRGSSD
KMRSMEELSEELFQQWENILPASFVFKEEKKGALFRAWGQEVTDTGLVVP
GLATDAVFEDFQPWVATVMRMTQTPLPPLLREAARIYYQHREFCVNFDEK
ENRTHVLSYGCYVGHGFQTPQIRDCHIQTIIASVWANFQSFAQELSESVL
ARGEGAVESCDQVVADVLSELLRNITIVSYVVVEEGQYFNALHPDMWLSV
VQNQKATSLAQSCEECAKALRPSCPTPPQPEADADEADEGSTLHSFEIQS
FLG*
back to top

spliced messenger RNA

>Ggra8751.t1 ID=Ggra8751.t1|Name=Ggra8751.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=912bp|location=Sequence derived from alignment at tig00000127_pilon:89042..89953- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTCCGAAAACGTTACATGAGCTACCGGTGGTAGCATTGTTTCCATT
TATGATTCATTCTGTGCTCTATTTCGTCATTGGAGGTGATCCAGATCCAA
ATAGGTGCGTCGAGATTATGCGAAATTGTTTACCACGAGGATCTTCGGAT
AAGATGCGAAGCATGGAGGAGCTTTCGGAAGAGTTATTTCAACAATGGGA
GAACATTCTTCCTGCCAGTTTTGTGTTCAAAGAAGAAAAGAAAGGTGCGC
TTTTTCGCGCATGGGGGCAGGAAGTAACAGATACAGGGTTGGTAGTTCCA
GGATTGGCGACAGATGCAGTCTTCGAAGACTTCCAGCCATGGGTAGCCAC
CGTAATGAGAATGACTCAAACTCCGCTTCCACCGTTACTGCGAGAAGCAG
CCCGTATCTACTATCAACACCGCGAGTTTTGTGTGAACTTTGATGAGAAG
GAAAACAGAACTCATGTTCTGAGCTACGGTTGCTACGTAGGCCATGGGTT
TCAAACACCTCAGATTCGTGATTGTCACATTCAGACAATTATTGCCAGCG
TTTGGGCGAACTTTCAATCATTCGCACAGGAGCTGAGTGAGTCAGTTCTG
GCTAGGGGTGAGGGAGCTGTGGAAAGTTGTGATCAGGTTGTTGCTGACGT
TCTTTCCGAGCTCTTACGCAACATAACTATTGTTTCCTATGTCGTTGTAG
AAGAAGGTCAGTATTTCAACGCCTTGCACCCGGACATGTGGCTATCGGTA
GTGCAGAATCAGAAAGCGACATCTTTGGCACAATCATGTGAAGAGTGTGC
GAAAGCCTTGAGACCTTCTTGCCCCACTCCACCCCAACCTGAAGCTGATG
CCGACGAAGCAGATGAAGGAAGTACATTGCATTCGTTTGAAATTCAGAGT
TTCTTAGGCTAA
back to top

protein sequence of Ggra8751.t1

>Ggra8751.t1 ID=Ggra8751.t1|Name=Ggra8751.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=304bp
MLPKTLHELPVVALFPFMIHSVLYFVIGGDPDPNRCVEIMRNCLPRGSSD
KMRSMEELSEELFQQWENILPASFVFKEEKKGALFRAWGQEVTDTGLVVP
GLATDAVFEDFQPWVATVMRMTQTPLPPLLREAARIYYQHREFCVNFDEK
ENRTHVLSYGCYVGHGFQTPQIRDCHIQTIIASVWANFQSFAQELSESVL
ARGEGAVESCDQVVADVLSELLRNITIVSYVVVEEGQYFNALHPDMWLSV
VQNQKATSLAQSCEECAKALRPSCPTPPQPEADADEADEGSTLHSFEIQS
FLG*
back to top

mRNA from alignment at tig00000127_pilon:89042..89953-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8751.t1 ID=Ggra8751.t1|Name=Ggra8751.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=912bp|location=Sequence derived from alignment at tig00000127_pilon:89042..89953- (Gracilaria gracilis GNS1m male)
ATGCTTCCGAAAACGTTACATGAGCTACCGGTGGTAGCATTGTTTCCATT
TATGATTCATTCTGTGCTCTATTTCGTCATTGGAGGTGATCCAGATCCAA
ATAGGTGCGTCGAGATTATGCGAAATTGTTTACCACGAGGATCTTCGGAT
AAGATGCGAAGCATGGAGGAGCTTTCGGAAGAGTTATTTCAACAATGGGA
GAACATTCTTCCTGCCAGTTTTGTGTTCAAAGAAGAAAAGAAAGGTGCGC
TTTTTCGCGCATGGGGGCAGGAAGTAACAGATACAGGGTTGGTAGTTCCA
GGATTGGCGACAGATGCAGTCTTCGAAGACTTCCAGCCATGGGTAGCCAC
CGTAATGAGAATGACTCAAACTCCGCTTCCACCGTTACTGCGAGAAGCAG
CCCGTATCTACTATCAACACCGCGAGTTTTGTGTGAACTTTGATGAGAAG
GAAAACAGAACTCATGTTCTGAGCTACGGTTGCTACGTAGGCCATGGGTT
TCAAACACCTCAGATTCGTGATTGTCACATTCAGACAATTATTGCCAGCG
TTTGGGCGAACTTTCAATCATTCGCACAGGAGCTGAGTGAGTCAGTTCTG
GCTAGGGGTGAGGGAGCTGTGGAAAGTTGTGATCAGGTTGTTGCTGACGT
TCTTTCCGAGCTCTTACGCAACATAACTATTGTTTCCTATGTCGTTGTAG
AAGAAGGTCAGTATTTCAACGCCTTGCACCCGGACATGTGGCTATCGGTA
GTGCAGAATCAGAAAGCGACATCTTTGGCACAATCATGTGAAGAGTGTGC
GAAAGCCTTGAGACCTTCTTGCCCCACTCCACCCCAACCTGAAGCTGATG
CCGACGAAGCAGATGAAGGAAGTACATTGCATTCGTTTGAAATTCAGAGT
TTCTTAGGCTAA
back to top

Coding sequence (CDS) from alignment at tig00000127_pilon:89042..89953-

>Ggra8751.t1 ID=Ggra8751.t1|Name=Ggra8751.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=912bp|location=Sequence derived from alignment at tig00000127_pilon:89042..89953- (Gracilaria gracilis GNS1m male)
ATGCTTCCGAAAACGTTACATGAGCTACCGGTGGTAGCATTGTTTCCATT
TATGATTCATTCTGTGCTCTATTTCGTCATTGGAGGTGATCCAGATCCAA
ATAGGTGCGTCGAGATTATGCGAAATTGTTTACCACGAGGATCTTCGGAT
AAGATGCGAAGCATGGAGGAGCTTTCGGAAGAGTTATTTCAACAATGGGA
GAACATTCTTCCTGCCAGTTTTGTGTTCAAAGAAGAAAAGAAAGGTGCGC
TTTTTCGCGCATGGGGGCAGGAAGTAACAGATACAGGGTTGGTAGTTCCA
GGATTGGCGACAGATGCAGTCTTCGAAGACTTCCAGCCATGGGTAGCCAC
CGTAATGAGAATGACTCAAACTCCGCTTCCACCGTTACTGCGAGAAGCAG
CCCGTATCTACTATCAACACCGCGAGTTTTGTGTGAACTTTGATGAGAAG
GAAAACAGAACTCATGTTCTGAGCTACGGTTGCTACGTAGGCCATGGGTT
TCAAACACCTCAGATTCGTGATTGTCACATTCAGACAATTATTGCCAGCG
TTTGGGCGAACTTTCAATCATTCGCACAGGAGCTGAGTGAGTCAGTTCTG
GCTAGGGGTGAGGGAGCTGTGGAAAGTTGTGATCAGGTTGTTGCTGACGT
TCTTTCCGAGCTCTTACGCAACATAACTATTGTTTCCTATGTCGTTGTAG
AAGAAGGTCAGTATTTCAACGCCTTGCACCCGGACATGTGGCTATCGGTA
GTGCAGAATCAGAAAGCGACATCTTTGGCACAATCATGTGAAGAGTGTGC
GAAAGCCTTGAGACCTTCTTGCCCCACTCCACCCCAACCTGAAGCTGATG
CCGACGAAGCAGATGAAGGAAGTACATTGCATTCGTTTGAAATTCAGAGT
TTCTTAGGCTAA
back to top