Ggra8521.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8521.t1
Unique NameGgra8521.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length191
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000191_piloncontigtig00000191_pilon:81167..81739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8521Ggra8521Gracilaria gracilis GNS1m malegenetig00000191_pilon 81167..81739 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8521.t1.stop1Ggra8521.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000191_pilon 81167..81169 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8521.t1.CDS1Ggra8521.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000191_pilon 81167..81739 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8521.t1.exon1Ggra8521.t1.exon1Gracilaria gracilis GNS1m maleexontig00000191_pilon 81167..81739 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8521.t1.start1Ggra8521.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000191_pilon 81737..81739 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8521.t1Ggra8521.t1Gracilaria gracilis GNS1m malepolypeptidetig00000191_pilon 81167..81739 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8521.t1 ID=Ggra8521.t1|Name=Ggra8521.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=191bp
MDDLKVKELNSCCFVSGEPGTDVDNELFELMRRKYDGHTFVWIEKIDLKH
VLVTISGSRHIIMLRGPESGPANELAILKETAQEKLVNSKSTGLVEMAAG
VQPKVKVQAYGSGLNPNVQTHDDGKEVELFAVDGLFSTCDSCERTVCNLN
GLTASIREEAHIVHVQWLGKHTCHGHRYSNFAIPSGSRIV*
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spliced messenger RNA

>Ggra8521.t1 ID=Ggra8521.t1|Name=Ggra8521.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=573bp|location=Sequence derived from alignment at tig00000191_pilon:81167..81739- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGATGACCTTAAAGTGAAAGAGCTCAACAGCTGTTGCTTCGTATCCGG
AGAACCAGGTACAGATGTGGACAATGAGCTCTTCGAACTGATGAGAAGAA
AATATGACGGTCATACGTTTGTATGGATCGAAAAAATAGATCTCAAACAC
GTGCTCGTTACCATTAGTGGATCACGTCACATAATCATGCTCAGGGGCCC
TGAGTCAGGACCTGCCAACGAGTTGGCTATACTGAAAGAAACAGCTCAAG
AAAAACTTGTGAATTCAAAATCAACCGGCTTAGTCGAAATGGCAGCTGGT
GTACAACCCAAGGTAAAAGTGCAGGCGTACGGGTCAGGACTGAACCCAAA
CGTTCAGACACATGATGATGGGAAAGAGGTTGAACTATTTGCGGTGGATG
GGTTGTTCTCCACCTGTGACTCGTGTGAGAGAACGGTTTGTAACCTTAAT
GGGTTGACCGCTTCCATTCGTGAAGAAGCACATATCGTTCACGTACAATG
GCTAGGAAAACATACTTGCCATGGTCACAGATATAGTAACTTCGCTATAC
CCAGTGGTTCCAGAATTGTTTGA
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protein sequence of Ggra8521.t1

>Ggra8521.t1 ID=Ggra8521.t1|Name=Ggra8521.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=191bp
MDDLKVKELNSCCFVSGEPGTDVDNELFELMRRKYDGHTFVWIEKIDLKH
VLVTISGSRHIIMLRGPESGPANELAILKETAQEKLVNSKSTGLVEMAAG
VQPKVKVQAYGSGLNPNVQTHDDGKEVELFAVDGLFSTCDSCERTVCNLN
GLTASIREEAHIVHVQWLGKHTCHGHRYSNFAIPSGSRIV*
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mRNA from alignment at tig00000191_pilon:81167..81739-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8521.t1 ID=Ggra8521.t1|Name=Ggra8521.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=573bp|location=Sequence derived from alignment at tig00000191_pilon:81167..81739- (Gracilaria gracilis GNS1m male)
ATGGATGACCTTAAAGTGAAAGAGCTCAACAGCTGTTGCTTCGTATCCGG
AGAACCAGGTACAGATGTGGACAATGAGCTCTTCGAACTGATGAGAAGAA
AATATGACGGTCATACGTTTGTATGGATCGAAAAAATAGATCTCAAACAC
GTGCTCGTTACCATTAGTGGATCACGTCACATAATCATGCTCAGGGGCCC
TGAGTCAGGACCTGCCAACGAGTTGGCTATACTGAAAGAAACAGCTCAAG
AAAAACTTGTGAATTCAAAATCAACCGGCTTAGTCGAAATGGCAGCTGGT
GTACAACCCAAGGTAAAAGTGCAGGCGTACGGGTCAGGACTGAACCCAAA
CGTTCAGACACATGATGATGGGAAAGAGGTTGAACTATTTGCGGTGGATG
GGTTGTTCTCCACCTGTGACTCGTGTGAGAGAACGGTTTGTAACCTTAAT
GGGTTGACCGCTTCCATTCGTGAAGAAGCACATATCGTTCACGTACAATG
GCTAGGAAAACATACTTGCCATGGTCACAGATATAGTAACTTCGCTATAC
CCAGTGGTTCCAGAATTGTTTGA
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Coding sequence (CDS) from alignment at tig00000191_pilon:81167..81739-

>Ggra8521.t1 ID=Ggra8521.t1|Name=Ggra8521.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=573bp|location=Sequence derived from alignment at tig00000191_pilon:81167..81739- (Gracilaria gracilis GNS1m male)
ATGGATGACCTTAAAGTGAAAGAGCTCAACAGCTGTTGCTTCGTATCCGG
AGAACCAGGTACAGATGTGGACAATGAGCTCTTCGAACTGATGAGAAGAA
AATATGACGGTCATACGTTTGTATGGATCGAAAAAATAGATCTCAAACAC
GTGCTCGTTACCATTAGTGGATCACGTCACATAATCATGCTCAGGGGCCC
TGAGTCAGGACCTGCCAACGAGTTGGCTATACTGAAAGAAACAGCTCAAG
AAAAACTTGTGAATTCAAAATCAACCGGCTTAGTCGAAATGGCAGCTGGT
GTACAACCCAAGGTAAAAGTGCAGGCGTACGGGTCAGGACTGAACCCAAA
CGTTCAGACACATGATGATGGGAAAGAGGTTGAACTATTTGCGGTGGATG
GGTTGTTCTCCACCTGTGACTCGTGTGAGAGAACGGTTTGTAACCTTAAT
GGGTTGACCGCTTCCATTCGTGAAGAAGCACATATCGTTCACGTACAATG
GCTAGGAAAACATACTTGCCATGGTCACAGATATAGTAACTTCGCTATAC
CCAGTGGTTCCAGAATTGTTTGA
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