Ggra8421.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8421.t1
Unique NameGgra8421.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length114
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:548755..549096 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8421Ggra8421Gracilaria gracilis GNS1m malegenetig00000041_pilon 548755..549096 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8421.t1.start1Ggra8421.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 548755..548757 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8421.t1.CDS1Ggra8421.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 548755..549096 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8421.t1.exon1Ggra8421.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 548755..549096 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8421.t1.stop1Ggra8421.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 549094..549096 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8421.t1Ggra8421.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 548755..549096 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8421.t1 ID=Ggra8421.t1|Name=Ggra8421.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=114bp
MNGTTSFLLLLGTGALILRPHDIPVMARAVGRAVVATVRSHRLAKNAAED
AIAENVKNAKDPNSELGMVGRGLRDFLSKFDAVTAAVRKDMADVPLSPRM
WIQKGVRSLDQTA*
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spliced messenger RNA

>Ggra8421.t1 ID=Ggra8421.t1|Name=Ggra8421.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=342bp|location=Sequence derived from alignment at tig00000041_pilon:548755..549096+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGGCACTACTTCTTTCCTTCTGCTATTAGGCACTGGTGCCCTTAT
CCTCAGGCCGCACGACATTCCAGTCATGGCTCGCGCCGTGGGGCGTGCTG
TCGTTGCTACCGTTCGATCACACCGTCTCGCCAAGAACGCTGCGGAGGAT
GCGATTGCGGAAAACGTCAAAAACGCAAAAGACCCCAATTCAGAGCTGGG
TATGGTTGGACGTGGCCTACGAGATTTCTTGTCTAAGTTTGATGCAGTCA
CGGCTGCCGTAAGGAAGGATATGGCCGACGTTCCTCTGAGCCCTAGAATG
TGGATTCAGAAGGGCGTACGATCACTTGATCAAACAGCTTAA
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protein sequence of Ggra8421.t1

>Ggra8421.t1 ID=Ggra8421.t1|Name=Ggra8421.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=114bp
MNGTTSFLLLLGTGALILRPHDIPVMARAVGRAVVATVRSHRLAKNAAED
AIAENVKNAKDPNSELGMVGRGLRDFLSKFDAVTAAVRKDMADVPLSPRM
WIQKGVRSLDQTA*
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mRNA from alignment at tig00000041_pilon:548755..549096+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8421.t1 ID=Ggra8421.t1|Name=Ggra8421.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=342bp|location=Sequence derived from alignment at tig00000041_pilon:548755..549096+ (Gracilaria gracilis GNS1m male)
ATGAACGGCACTACTTCTTTCCTTCTGCTATTAGGCACTGGTGCCCTTAT
CCTCAGGCCGCACGACATTCCAGTCATGGCTCGCGCCGTGGGGCGTGCTG
TCGTTGCTACCGTTCGATCACACCGTCTCGCCAAGAACGCTGCGGAGGAT
GCGATTGCGGAAAACGTCAAAAACGCAAAAGACCCCAATTCAGAGCTGGG
TATGGTTGGACGTGGCCTACGAGATTTCTTGTCTAAGTTTGATGCAGTCA
CGGCTGCCGTAAGGAAGGATATGGCCGACGTTCCTCTGAGCCCTAGAATG
TGGATTCAGAAGGGCGTACGATCACTTGATCAAACAGCTTAA
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Coding sequence (CDS) from alignment at tig00000041_pilon:548755..549096+

>Ggra8421.t1 ID=Ggra8421.t1|Name=Ggra8421.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=342bp|location=Sequence derived from alignment at tig00000041_pilon:548755..549096+ (Gracilaria gracilis GNS1m male)
ATGAACGGCACTACTTCTTTCCTTCTGCTATTAGGCACTGGTGCCCTTAT
CCTCAGGCCGCACGACATTCCAGTCATGGCTCGCGCCGTGGGGCGTGCTG
TCGTTGCTACCGTTCGATCACACCGTCTCGCCAAGAACGCTGCGGAGGAT
GCGATTGCGGAAAACGTCAAAAACGCAAAAGACCCCAATTCAGAGCTGGG
TATGGTTGGACGTGGCCTACGAGATTTCTTGTCTAAGTTTGATGCAGTCA
CGGCTGCCGTAAGGAAGGATATGGCCGACGTTCCTCTGAGCCCTAGAATG
TGGATTCAGAAGGGCGTACGATCACTTGATCAAACAGCTTAA
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