Ggra7910.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7910.t1
Unique NameGgra7910.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:415680..416261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7910Ggra7910Gracilaria gracilis GNS1m malegenetig00000073_pilon 415680..416261 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7910.t1.stop1Ggra7910.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000073_pilon 415680..415682 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7910.t1.CDS1Ggra7910.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000073_pilon 415680..416261 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7910.t1.exon1Ggra7910.t1.exon1Gracilaria gracilis GNS1m maleexontig00000073_pilon 415680..416261 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7910.t1.start1Ggra7910.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000073_pilon 416259..416261 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7910.t1Ggra7910.t1Gracilaria gracilis GNS1m malepolypeptidetig00000073_pilon 415680..416261 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7910.t1 ID=Ggra7910.t1|Name=Ggra7910.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=194bp
MFKHYHSSLIKIEKRRNGRGFQSLHSTMSADAEKKLREQLKVALQDARKL
FDDGLIDEKEFKDLKSHELTKYKQQLAAIAATSTPPATSSTPAAKPVKLT
QLTPIRTPLNTRLHHTVRQSPASAPSYMSPATRTQPRCSKDEVLVVDSGT
FHRLTTPPIFRRRTKKRRIVVPSEELSKLRQPPQPDQLKSPKS*
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spliced messenger RNA

>Ggra7910.t1 ID=Ggra7910.t1|Name=Ggra7910.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000073_pilon:415680..416261- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTCAAACACTATCACTCCTCGCTCATCAAGATCGAAAAACGTCGCAA
CGGTCGCGGCTTTCAATCTCTGCACAGCACAATGTCCGCCGACGCCGAGA
AGAAACTGCGAGAACAGTTGAAGGTCGCTCTACAAGACGCGCGCAAACTC
TTCGACGACGGACTCATTGACGAGAAGGAATTCAAAGACCTCAAATCGCA
TGAGCTCACCAAATACAAGCAGCAGCTCGCAGCAATAGCTGCTACTTCCA
CGCCACCAGCAACTTCGTCAACGCCCGCTGCAAAACCCGTCAAACTAACT
CAGCTCACGCCAATTCGCACGCCGCTCAATACGCGTCTCCACCATACGGT
TCGACAATCGCCCGCTTCGGCTCCGTCATACATGTCACCCGCTACGCGCA
CCCAACCGCGCTGCTCGAAGGACGAGGTGCTCGTCGTGGATTCGGGCACC
TTTCATAGACTCACCACGCCGCCGATCTTCAGGCGTCGAACAAAGAAGAG
GCGTATCGTTGTGCCGAGTGAGGAGCTCAGCAAGCTTCGACAACCTCCAC
AACCAGATCAACTCAAATCACCGAAGAGTTGA
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protein sequence of Ggra7910.t1

>Ggra7910.t1 ID=Ggra7910.t1|Name=Ggra7910.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MFKHYHSSLIKIEKRRNGRGFQSLHSTMSADAEKKLREQLKVALQDARKL
FDDGLIDEKEFKDLKSHELTKYKQQLAAIAATSTPPATSSTPAAKPVKLT
QLTPIRTPLNTRLHHTVRQSPASAPSYMSPATRTQPRCSKDEVLVVDSGT
FHRLTTPPIFRRRTKKRRIVVPSEELSKLRQPPQPDQLKSPKS*
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mRNA from alignment at tig00000073_pilon:415680..416261-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7910.t1 ID=Ggra7910.t1|Name=Ggra7910.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=582bp|location=Sequence derived from alignment at tig00000073_pilon:415680..416261- (Gracilaria gracilis GNS1m male)
ATGTTCAAACACTATCACTCCTCGCTCATCAAGATCGAAAAACGTCGCAA
CGGTCGCGGCTTTCAATCTCTGCACAGCACAATGTCCGCCGACGCCGAGA
AGAAACTGCGAGAACAGTTGAAGGTCGCTCTACAAGACGCGCGCAAACTC
TTCGACGACGGACTCATTGACGAGAAGGAATTCAAAGACCTCAAATCGCA
TGAGCTCACCAAATACAAGCAGCAGCTCGCAGCAATAGCTGCTACTTCCA
CGCCACCAGCAACTTCGTCAACGCCCGCTGCAAAACCCGTCAAACTAACT
CAGCTCACGCCAATTCGCACGCCGCTCAATACGCGTCTCCACCATACGGT
TCGACAATCGCCCGCTTCGGCTCCGTCATACATGTCACCCGCTACGCGCA
CCCAACCGCGCTGCTCGAAGGACGAGGTGCTCGTCGTGGATTCGGGCACC
TTTCATAGACTCACCACGCCGCCGATCTTCAGGCGTCGAACAAAGAAGAG
GCGTATCGTTGTGCCGAGTGAGGAGCTCAGCAAGCTTCGACAACCTCCAC
AACCAGATCAACTCAAATCACCGAAGAGTTGA
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Coding sequence (CDS) from alignment at tig00000073_pilon:415680..416261-

>Ggra7910.t1 ID=Ggra7910.t1|Name=Ggra7910.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=582bp|location=Sequence derived from alignment at tig00000073_pilon:415680..416261- (Gracilaria gracilis GNS1m male)
ATGTTCAAACACTATCACTCCTCGCTCATCAAGATCGAAAAACGTCGCAA
CGGTCGCGGCTTTCAATCTCTGCACAGCACAATGTCCGCCGACGCCGAGA
AGAAACTGCGAGAACAGTTGAAGGTCGCTCTACAAGACGCGCGCAAACTC
TTCGACGACGGACTCATTGACGAGAAGGAATTCAAAGACCTCAAATCGCA
TGAGCTCACCAAATACAAGCAGCAGCTCGCAGCAATAGCTGCTACTTCCA
CGCCACCAGCAACTTCGTCAACGCCCGCTGCAAAACCCGTCAAACTAACT
CAGCTCACGCCAATTCGCACGCCGCTCAATACGCGTCTCCACCATACGGT
TCGACAATCGCCCGCTTCGGCTCCGTCATACATGTCACCCGCTACGCGCA
CCCAACCGCGCTGCTCGAAGGACGAGGTGCTCGTCGTGGATTCGGGCACC
TTTCATAGACTCACCACGCCGCCGATCTTCAGGCGTCGAACAAAGAAGAG
GCGTATCGTTGTGCCGAGTGAGGAGCTCAGCAAGCTTCGACAACCTCCAC
AACCAGATCAACTCAAATCACCGAAGAGTTGA
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