Ggra7887.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7887.t1
Unique NameGgra7887.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length235
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:244767..245471 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7887Ggra7887Gracilaria gracilis GNS1m malegenetig00000073_pilon 244767..245471 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7887.t1.start1Ggra7887.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000073_pilon 244767..244769 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7887.t1.CDS1Ggra7887.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000073_pilon 244767..245471 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7887.t1.exon1Ggra7887.t1.exon1Gracilaria gracilis GNS1m maleexontig00000073_pilon 244767..245471 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7887.t1.stop1Ggra7887.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000073_pilon 245469..245471 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7887.t1Ggra7887.t1Gracilaria gracilis GNS1m malepolypeptidetig00000073_pilon 244767..245471 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7887.t1 ID=Ggra7887.t1|Name=Ggra7887.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=235bp
MVEQSQNELGGSAFIDKSENQKEGRVWNEEFARLKQKIGSYNEQYDDVTA
DILALGDDKHDIDFKRAEDIEELEQQNQNWISAAKKVQEAVNDTSSLQEQ
QKSVEELEHLKKELLDAFVKSSDENAELQEKVRDLEGPMQHLEQFNSHVY
DKEHSEVPTKKFTLKVLKLLSAAYLHEDGDPKVFKGFFTHPKTNDVIPFK
YNEDVPDFERIEEVWDTLSEIVDGDPQNSHQVKA*
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spliced messenger RNA

>Ggra7887.t1 ID=Ggra7887.t1|Name=Ggra7887.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=705bp|location=Sequence derived from alignment at tig00000073_pilon:244767..245471+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAGAACAGAGCCAAAACGAATTGGGCGGCTCGGCCTTCATTGATAA
GAGCGAGAATCAGAAAGAGGGGCGTGTCTGGAATGAAGAGTTCGCCAGGT
TGAAACAGAAGATTGGAAGCTACAACGAACAATATGACGATGTAACTGCA
GATATCCTGGCACTTGGAGATGATAAACACGACATTGATTTCAAAAGAGC
TGAAGACATTGAAGAGCTGGAACAACAGAATCAAAACTGGATCAGTGCTG
CGAAAAAGGTTCAAGAGGCAGTGAATGACACCTCTTCGCTCCAAGAACAA
CAAAAATCAGTCGAAGAGCTTGAACATCTCAAGAAGGAGTTATTGGATGC
GTTCGTCAAAAGCAGTGATGAAAATGCCGAACTTCAAGAAAAAGTCAGAG
ATCTTGAGGGGCCAATGCAACACCTTGAACAATTCAACAGTCATGTTTAT
GACAAGGAACATTCGGAAGTGCCAACGAAGAAGTTCACTCTGAAAGTGTT
GAAGTTGTTATCGGCAGCATATTTGCACGAAGATGGAGATCCAAAAGTTT
TCAAAGGATTCTTCACCCATCCTAAGACGAATGATGTGATTCCTTTCAAG
TACAATGAAGATGTACCAGACTTTGAACGGATAGAAGAAGTATGGGACAC
ACTTTCTGAAATCGTGGATGGTGATCCGCAAAATAGCCACCAGGTCAAAG
CATGA
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protein sequence of Ggra7887.t1

>Ggra7887.t1 ID=Ggra7887.t1|Name=Ggra7887.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=235bp
MVEQSQNELGGSAFIDKSENQKEGRVWNEEFARLKQKIGSYNEQYDDVTA
DILALGDDKHDIDFKRAEDIEELEQQNQNWISAAKKVQEAVNDTSSLQEQ
QKSVEELEHLKKELLDAFVKSSDENAELQEKVRDLEGPMQHLEQFNSHVY
DKEHSEVPTKKFTLKVLKLLSAAYLHEDGDPKVFKGFFTHPKTNDVIPFK
YNEDVPDFERIEEVWDTLSEIVDGDPQNSHQVKA*
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mRNA from alignment at tig00000073_pilon:244767..245471+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7887.t1 ID=Ggra7887.t1|Name=Ggra7887.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=705bp|location=Sequence derived from alignment at tig00000073_pilon:244767..245471+ (Gracilaria gracilis GNS1m male)
ATGGTAGAACAGAGCCAAAACGAATTGGGCGGCTCGGCCTTCATTGATAA
GAGCGAGAATCAGAAAGAGGGGCGTGTCTGGAATGAAGAGTTCGCCAGGT
TGAAACAGAAGATTGGAAGCTACAACGAACAATATGACGATGTAACTGCA
GATATCCTGGCACTTGGAGATGATAAACACGACATTGATTTCAAAAGAGC
TGAAGACATTGAAGAGCTGGAACAACAGAATCAAAACTGGATCAGTGCTG
CGAAAAAGGTTCAAGAGGCAGTGAATGACACCTCTTCGCTCCAAGAACAA
CAAAAATCAGTCGAAGAGCTTGAACATCTCAAGAAGGAGTTATTGGATGC
GTTCGTCAAAAGCAGTGATGAAAATGCCGAACTTCAAGAAAAAGTCAGAG
ATCTTGAGGGGCCAATGCAACACCTTGAACAATTCAACAGTCATGTTTAT
GACAAGGAACATTCGGAAGTGCCAACGAAGAAGTTCACTCTGAAAGTGTT
GAAGTTGTTATCGGCAGCATATTTGCACGAAGATGGAGATCCAAAAGTTT
TCAAAGGATTCTTCACCCATCCTAAGACGAATGATGTGATTCCTTTCAAG
TACAATGAAGATGTACCAGACTTTGAACGGATAGAAGAAGTATGGGACAC
ACTTTCTGAAATCGTGGATGGTGATCCGCAAAATAGCCACCAGGTCAAAG
CATGA
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Coding sequence (CDS) from alignment at tig00000073_pilon:244767..245471+

>Ggra7887.t1 ID=Ggra7887.t1|Name=Ggra7887.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=705bp|location=Sequence derived from alignment at tig00000073_pilon:244767..245471+ (Gracilaria gracilis GNS1m male)
ATGGTAGAACAGAGCCAAAACGAATTGGGCGGCTCGGCCTTCATTGATAA
GAGCGAGAATCAGAAAGAGGGGCGTGTCTGGAATGAAGAGTTCGCCAGGT
TGAAACAGAAGATTGGAAGCTACAACGAACAATATGACGATGTAACTGCA
GATATCCTGGCACTTGGAGATGATAAACACGACATTGATTTCAAAAGAGC
TGAAGACATTGAAGAGCTGGAACAACAGAATCAAAACTGGATCAGTGCTG
CGAAAAAGGTTCAAGAGGCAGTGAATGACACCTCTTCGCTCCAAGAACAA
CAAAAATCAGTCGAAGAGCTTGAACATCTCAAGAAGGAGTTATTGGATGC
GTTCGTCAAAAGCAGTGATGAAAATGCCGAACTTCAAGAAAAAGTCAGAG
ATCTTGAGGGGCCAATGCAACACCTTGAACAATTCAACAGTCATGTTTAT
GACAAGGAACATTCGGAAGTGCCAACGAAGAAGTTCACTCTGAAAGTGTT
GAAGTTGTTATCGGCAGCATATTTGCACGAAGATGGAGATCCAAAAGTTT
TCAAAGGATTCTTCACCCATCCTAAGACGAATGATGTGATTCCTTTCAAG
TACAATGAAGATGTACCAGACTTTGAACGGATAGAAGAAGTATGGGACAC
ACTTTCTGAAATCGTGGATGGTGATCCGCAAAATAGCCACCAGGTCAAAG
CATGA
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