Ggra6950.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6950.t1
Unique NameGgra6950.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length438
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000115_piloncontigtig00000115_pilon:317031..318344 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6950Ggra6950Gracilaria gracilis GNS1m malegenetig00000115_pilon 317031..318344 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6950.t1.stop1Ggra6950.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000115_pilon 317031..317033 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6950.t1.CDS1Ggra6950.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000115_pilon 317031..318344 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6950.t1.exon1Ggra6950.t1.exon1Gracilaria gracilis GNS1m maleexontig00000115_pilon 317031..318344 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6950.t1.start1Ggra6950.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000115_pilon 318342..318344 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6950.t1Ggra6950.t1Gracilaria gracilis GNS1m malepolypeptidetig00000115_pilon 317031..318344 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6950.t1 ID=Ggra6950.t1|Name=Ggra6950.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=438bp
MYAFRPLCFSGWSELGDTDSAIQSLIEMDGTMCRTKESIFMLPGAGVGVP
CKVQLLLYPDRAELNFNSDLLLTFDKVTGKGRVRGPEKDVRNWAPMREMN
ELCKFVSEHNDREDMLLENPDFYRMLSGKVHFGRCLRSAHEREGHGWLRR
MGSQICGDSLMLYCVLWTLALLLLYGVIKPALVHVLKSETGSVSVYAWRV
LTVGVIESLLHVLFTEGLQSVQEGLFGSVAIESFHSERRLGIWAASLNGF
GAFTLSGLLFVNSCIALSFHFFPEGRGLVDAFKVNSVAFSSAGFLLGLGN
YCLQRWLVLWSTGNGSNHVMDLPQERRTVGKVLQIVVHSGGSTLKSMMFM
NGMGKAVEPFFQRFVPIVSAQLVSDSFSDGLRKRMSRVVPPVLGNTAFVV
LIIMYSVAELQERALVRRKWEALYAGNERKWRRFVSL*
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spliced messenger RNA

>Ggra6950.t1 ID=Ggra6950.t1|Name=Ggra6950.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1314bp|location=Sequence derived from alignment at tig00000115_pilon:317031..318344- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACGCGTTTAGGCCTCTGTGTTTCTCTGGATGGAGTGAACTGGGGGA
CACGGACTCTGCAATACAAAGTCTAATTGAAATGGATGGTACAATGTGTA
GAACGAAAGAGTCAATATTCATGCTACCTGGTGCAGGGGTTGGGGTGCCA
TGTAAAGTGCAGCTGCTGTTGTACCCTGACAGAGCTGAGTTGAACTTTAA
CAGTGACTTATTGCTAACGTTCGACAAAGTAACGGGAAAGGGGCGGGTTA
GGGGGCCTGAGAAGGACGTACGAAACTGGGCGCCGATGAGGGAGATGAAC
GAATTGTGTAAGTTCGTTTCAGAGCATAATGATAGAGAGGATATGTTGCT
GGAGAACCCTGATTTCTATCGAATGTTGTCTGGCAAAGTACACTTTGGGA
GGTGCCTTCGTTCTGCACACGAAAGGGAGGGGCATGGTTGGCTGAGGCGA
ATGGGTAGCCAGATTTGCGGGGACTCGCTGATGTTGTATTGTGTGTTGTG
GACGCTTGCTCTTTTGTTGTTGTATGGAGTGATAAAACCGGCACTTGTGC
ATGTGCTAAAGTCGGAGACTGGTTCTGTGAGCGTGTATGCTTGGAGGGTG
TTGACGGTGGGGGTAATTGAGTCGTTGCTGCATGTGTTGTTTACGGAAGG
TTTGCAGTCTGTGCAGGAAGGGTTGTTTGGTTCGGTGGCCATAGAGAGCT
TTCACTCTGAGCGTCGGCTTGGGATTTGGGCTGCGTCATTGAATGGATTT
GGGGCGTTTACGTTAAGTGGACTGTTGTTTGTGAACAGTTGCATTGCTTT
GAGTTTTCATTTCTTTCCGGAAGGGAGAGGGCTGGTGGATGCATTTAAGG
TGAACAGTGTTGCATTTTCTTCCGCAGGGTTTCTGTTGGGACTGGGTAAC
TATTGTCTACAGAGATGGCTTGTGCTGTGGAGCACAGGGAATGGTTCGAA
TCATGTTATGGATTTGCCACAAGAGAGAAGAACGGTGGGCAAGGTGCTGC
AAATAGTTGTGCATAGTGGGGGTAGTACATTGAAGTCGATGATGTTTATG
AATGGGATGGGGAAGGCGGTGGAGCCATTCTTTCAGAGGTTTGTTCCGAT
TGTGAGTGCTCAATTGGTGAGCGATTCATTTTCGGATGGTTTGCGGAAAC
GCATGAGCCGTGTGGTGCCACCAGTACTGGGTAACACTGCTTTTGTTGTG
TTAATCATAATGTATTCTGTTGCTGAGCTACAGGAAAGAGCGTTGGTAAG
AAGAAAGTGGGAGGCGCTTTACGCAGGGAATGAGAGAAAGTGGCGTCGCT
TTGTAAGTTTATAA
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protein sequence of Ggra6950.t1

>Ggra6950.t1 ID=Ggra6950.t1|Name=Ggra6950.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=438bp
MYAFRPLCFSGWSELGDTDSAIQSLIEMDGTMCRTKESIFMLPGAGVGVP
CKVQLLLYPDRAELNFNSDLLLTFDKVTGKGRVRGPEKDVRNWAPMREMN
ELCKFVSEHNDREDMLLENPDFYRMLSGKVHFGRCLRSAHEREGHGWLRR
MGSQICGDSLMLYCVLWTLALLLLYGVIKPALVHVLKSETGSVSVYAWRV
LTVGVIESLLHVLFTEGLQSVQEGLFGSVAIESFHSERRLGIWAASLNGF
GAFTLSGLLFVNSCIALSFHFFPEGRGLVDAFKVNSVAFSSAGFLLGLGN
YCLQRWLVLWSTGNGSNHVMDLPQERRTVGKVLQIVVHSGGSTLKSMMFM
NGMGKAVEPFFQRFVPIVSAQLVSDSFSDGLRKRMSRVVPPVLGNTAFVV
LIIMYSVAELQERALVRRKWEALYAGNERKWRRFVSL*
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mRNA from alignment at tig00000115_pilon:317031..318344-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6950.t1 ID=Ggra6950.t1|Name=Ggra6950.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1314bp|location=Sequence derived from alignment at tig00000115_pilon:317031..318344- (Gracilaria gracilis GNS1m male)
ATGTACGCGTTTAGGCCTCTGTGTTTCTCTGGATGGAGTGAACTGGGGGA
CACGGACTCTGCAATACAAAGTCTAATTGAAATGGATGGTACAATGTGTA
GAACGAAAGAGTCAATATTCATGCTACCTGGTGCAGGGGTTGGGGTGCCA
TGTAAAGTGCAGCTGCTGTTGTACCCTGACAGAGCTGAGTTGAACTTTAA
CAGTGACTTATTGCTAACGTTCGACAAAGTAACGGGAAAGGGGCGGGTTA
GGGGGCCTGAGAAGGACGTACGAAACTGGGCGCCGATGAGGGAGATGAAC
GAATTGTGTAAGTTCGTTTCAGAGCATAATGATAGAGAGGATATGTTGCT
GGAGAACCCTGATTTCTATCGAATGTTGTCTGGCAAAGTACACTTTGGGA
GGTGCCTTCGTTCTGCACACGAAAGGGAGGGGCATGGTTGGCTGAGGCGA
ATGGGTAGCCAGATTTGCGGGGACTCGCTGATGTTGTATTGTGTGTTGTG
GACGCTTGCTCTTTTGTTGTTGTATGGAGTGATAAAACCGGCACTTGTGC
ATGTGCTAAAGTCGGAGACTGGTTCTGTGAGCGTGTATGCTTGGAGGGTG
TTGACGGTGGGGGTAATTGAGTCGTTGCTGCATGTGTTGTTTACGGAAGG
TTTGCAGTCTGTGCAGGAAGGGTTGTTTGGTTCGGTGGCCATAGAGAGCT
TTCACTCTGAGCGTCGGCTTGGGATTTGGGCTGCGTCATTGAATGGATTT
GGGGCGTTTACGTTAAGTGGACTGTTGTTTGTGAACAGTTGCATTGCTTT
GAGTTTTCATTTCTTTCCGGAAGGGAGAGGGCTGGTGGATGCATTTAAGG
TGAACAGTGTTGCATTTTCTTCCGCAGGGTTTCTGTTGGGACTGGGTAAC
TATTGTCTACAGAGATGGCTTGTGCTGTGGAGCACAGGGAATGGTTCGAA
TCATGTTATGGATTTGCCACAAGAGAGAAGAACGGTGGGCAAGGTGCTGC
AAATAGTTGTGCATAGTGGGGGTAGTACATTGAAGTCGATGATGTTTATG
AATGGGATGGGGAAGGCGGTGGAGCCATTCTTTCAGAGGTTTGTTCCGAT
TGTGAGTGCTCAATTGGTGAGCGATTCATTTTCGGATGGTTTGCGGAAAC
GCATGAGCCGTGTGGTGCCACCAGTACTGGGTAACACTGCTTTTGTTGTG
TTAATCATAATGTATTCTGTTGCTGAGCTACAGGAAAGAGCGTTGGTAAG
AAGAAAGTGGGAGGCGCTTTACGCAGGGAATGAGAGAAAGTGGCGTCGCT
TTGTAAGTTTATAA
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Coding sequence (CDS) from alignment at tig00000115_pilon:317031..318344-

>Ggra6950.t1 ID=Ggra6950.t1|Name=Ggra6950.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1314bp|location=Sequence derived from alignment at tig00000115_pilon:317031..318344- (Gracilaria gracilis GNS1m male)
ATGTACGCGTTTAGGCCTCTGTGTTTCTCTGGATGGAGTGAACTGGGGGA
CACGGACTCTGCAATACAAAGTCTAATTGAAATGGATGGTACAATGTGTA
GAACGAAAGAGTCAATATTCATGCTACCTGGTGCAGGGGTTGGGGTGCCA
TGTAAAGTGCAGCTGCTGTTGTACCCTGACAGAGCTGAGTTGAACTTTAA
CAGTGACTTATTGCTAACGTTCGACAAAGTAACGGGAAAGGGGCGGGTTA
GGGGGCCTGAGAAGGACGTACGAAACTGGGCGCCGATGAGGGAGATGAAC
GAATTGTGTAAGTTCGTTTCAGAGCATAATGATAGAGAGGATATGTTGCT
GGAGAACCCTGATTTCTATCGAATGTTGTCTGGCAAAGTACACTTTGGGA
GGTGCCTTCGTTCTGCACACGAAAGGGAGGGGCATGGTTGGCTGAGGCGA
ATGGGTAGCCAGATTTGCGGGGACTCGCTGATGTTGTATTGTGTGTTGTG
GACGCTTGCTCTTTTGTTGTTGTATGGAGTGATAAAACCGGCACTTGTGC
ATGTGCTAAAGTCGGAGACTGGTTCTGTGAGCGTGTATGCTTGGAGGGTG
TTGACGGTGGGGGTAATTGAGTCGTTGCTGCATGTGTTGTTTACGGAAGG
TTTGCAGTCTGTGCAGGAAGGGTTGTTTGGTTCGGTGGCCATAGAGAGCT
TTCACTCTGAGCGTCGGCTTGGGATTTGGGCTGCGTCATTGAATGGATTT
GGGGCGTTTACGTTAAGTGGACTGTTGTTTGTGAACAGTTGCATTGCTTT
GAGTTTTCATTTCTTTCCGGAAGGGAGAGGGCTGGTGGATGCATTTAAGG
TGAACAGTGTTGCATTTTCTTCCGCAGGGTTTCTGTTGGGACTGGGTAAC
TATTGTCTACAGAGATGGCTTGTGCTGTGGAGCACAGGGAATGGTTCGAA
TCATGTTATGGATTTGCCACAAGAGAGAAGAACGGTGGGCAAGGTGCTGC
AAATAGTTGTGCATAGTGGGGGTAGTACATTGAAGTCGATGATGTTTATG
AATGGGATGGGGAAGGCGGTGGAGCCATTCTTTCAGAGGTTTGTTCCGAT
TGTGAGTGCTCAATTGGTGAGCGATTCATTTTCGGATGGTTTGCGGAAAC
GCATGAGCCGTGTGGTGCCACCAGTACTGGGTAACACTGCTTTTGTTGTG
TTAATCATAATGTATTCTGTTGCTGAGCTACAGGAAAGAGCGTTGGTAAG
AAGAAAGTGGGAGGCGCTTTACGCAGGGAATGAGAGAAAGTGGCGTCGCT
TTGTAAGTTTATAA
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