Ggra6792.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra6792.t1
Unique NameGgra6792.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length265
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:529301..530095 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6792Ggra6792Gracilaria gracilis GNS1m malegenetig00000056_pilon 529301..530095 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6792.t1.start1Ggra6792.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000056_pilon 529301..529303 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6792.t1.CDS1Ggra6792.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000056_pilon 529301..530095 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6792.t1.exon1Ggra6792.t1.exon1Gracilaria gracilis GNS1m maleexontig00000056_pilon 529301..530095 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6792.t1.stop1Ggra6792.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000056_pilon 530093..530095 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra6792.t1Ggra6792.t1Gracilaria gracilis GNS1m malepolypeptidetig00000056_pilon 529301..530095 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra6792.t1 ID=Ggra6792.t1|Name=Ggra6792.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=265bp
MEGKVSRVDDVSEAQRDTAGDDQAHMPLALSQLGRFRATVCFANSFYDHK
LQLHRSTAANVLQRSALSSDALIVLWSGLVRGYGRRNLQYKMMSLANMVS
EWAPVANQVRTFLSQFTCEDERHESDQRIMLSRLCELFPQFSSEMYAAVA
DQRECGARNCDLGARLASQPWMATVKLAPDARKLNRDSYRALWHAVGGSF
LNSFNDEYARLSAVQQPLRTRHGAGCHCRSTELRVCDLHRWMHCYVSHAL
PLRPTSVTVAHSDQ*
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spliced messenger RNA

>Ggra6792.t1 ID=Ggra6792.t1|Name=Ggra6792.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=795bp|location=Sequence derived from alignment at tig00000056_pilon:529301..530095+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAAGGCAAGGTGAGCAGAGTGGACGACGTGAGTGAGGCGCAGCGCGA
CACGGCTGGCGACGACCAAGCACACATGCCGCTGGCGCTGTCGCAGCTTG
GGCGCTTCCGCGCCACCGTGTGCTTCGCCAACAGCTTCTACGACCACAAA
CTGCAGCTGCACCGCAGCACGGCGGCGAACGTGTTGCAGCGCAGCGCGCT
GTCGTCGGACGCGCTCATCGTGCTGTGGAGCGGGCTGGTGCGCGGCTACG
GGCGGCGCAACCTGCAGTACAAGATGATGTCGCTGGCCAACATGGTGAGC
GAGTGGGCGCCGGTGGCCAACCAAGTGCGCACCTTCCTGAGCCAATTTAC
ATGTGAAGACGAGCGTCACGAGAGCGATCAGCGCATCATGCTGTCGCGCC
TGTGCGAACTGTTCCCGCAATTCAGCAGCGAGATGTACGCCGCCGTGGCC
GACCAGCGCGAGTGCGGCGCGCGCAACTGCGACCTGGGCGCGCGGCTGGC
GTCGCAGCCGTGGATGGCCACCGTGAAGCTGGCGCCGGACGCGCGCAAGC
TCAACCGCGACAGCTACCGCGCGCTGTGGCACGCGGTCGGCGGCAGCTTC
CTCAACTCGTTCAACGACGAGTACGCGCGTCTGAGCGCCGTGCAACAGCC
GTTGCGCACGCGCCACGGCGCCGGCTGCCACTGCCGTAGCACCGAGCTGC
GCGTGTGCGACCTGCACCGCTGGATGCACTGCTACGTCTCACACGCGTTG
CCGCTGCGCCCCACCAGCGTCACTGTCGCACACAGCGATCAATGA
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protein sequence of Ggra6792.t1

>Ggra6792.t1 ID=Ggra6792.t1|Name=Ggra6792.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=265bp
MEGKVSRVDDVSEAQRDTAGDDQAHMPLALSQLGRFRATVCFANSFYDHK
LQLHRSTAANVLQRSALSSDALIVLWSGLVRGYGRRNLQYKMMSLANMVS
EWAPVANQVRTFLSQFTCEDERHESDQRIMLSRLCELFPQFSSEMYAAVA
DQRECGARNCDLGARLASQPWMATVKLAPDARKLNRDSYRALWHAVGGSF
LNSFNDEYARLSAVQQPLRTRHGAGCHCRSTELRVCDLHRWMHCYVSHAL
PLRPTSVTVAHSDQ*
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mRNA from alignment at tig00000056_pilon:529301..530095+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra6792.t1 ID=Ggra6792.t1|Name=Ggra6792.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=795bp|location=Sequence derived from alignment at tig00000056_pilon:529301..530095+ (Gracilaria gracilis GNS1m male)
ATGGAAGGCAAGGTGAGCAGAGTGGACGACGTGAGTGAGGCGCAGCGCGA
CACGGCTGGCGACGACCAAGCACACATGCCGCTGGCGCTGTCGCAGCTTG
GGCGCTTCCGCGCCACCGTGTGCTTCGCCAACAGCTTCTACGACCACAAA
CTGCAGCTGCACCGCAGCACGGCGGCGAACGTGTTGCAGCGCAGCGCGCT
GTCGTCGGACGCGCTCATCGTGCTGTGGAGCGGGCTGGTGCGCGGCTACG
GGCGGCGCAACCTGCAGTACAAGATGATGTCGCTGGCCAACATGGTGAGC
GAGTGGGCGCCGGTGGCCAACCAAGTGCGCACCTTCCTGAGCCAATTTAC
ATGTGAAGACGAGCGTCACGAGAGCGATCAGCGCATCATGCTGTCGCGCC
TGTGCGAACTGTTCCCGCAATTCAGCAGCGAGATGTACGCCGCCGTGGCC
GACCAGCGCGAGTGCGGCGCGCGCAACTGCGACCTGGGCGCGCGGCTGGC
GTCGCAGCCGTGGATGGCCACCGTGAAGCTGGCGCCGGACGCGCGCAAGC
TCAACCGCGACAGCTACCGCGCGCTGTGGCACGCGGTCGGCGGCAGCTTC
CTCAACTCGTTCAACGACGAGTACGCGCGTCTGAGCGCCGTGCAACAGCC
GTTGCGCACGCGCCACGGCGCCGGCTGCCACTGCCGTAGCACCGAGCTGC
GCGTGTGCGACCTGCACCGCTGGATGCACTGCTACGTCTCACACGCGTTG
CCGCTGCGCCCCACCAGCGTCACTGTCGCACACAGCGATCAATGA
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Coding sequence (CDS) from alignment at tig00000056_pilon:529301..530095+

>Ggra6792.t1 ID=Ggra6792.t1|Name=Ggra6792.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=795bp|location=Sequence derived from alignment at tig00000056_pilon:529301..530095+ (Gracilaria gracilis GNS1m male)
ATGGAAGGCAAGGTGAGCAGAGTGGACGACGTGAGTGAGGCGCAGCGCGA
CACGGCTGGCGACGACCAAGCACACATGCCGCTGGCGCTGTCGCAGCTTG
GGCGCTTCCGCGCCACCGTGTGCTTCGCCAACAGCTTCTACGACCACAAA
CTGCAGCTGCACCGCAGCACGGCGGCGAACGTGTTGCAGCGCAGCGCGCT
GTCGTCGGACGCGCTCATCGTGCTGTGGAGCGGGCTGGTGCGCGGCTACG
GGCGGCGCAACCTGCAGTACAAGATGATGTCGCTGGCCAACATGGTGAGC
GAGTGGGCGCCGGTGGCCAACCAAGTGCGCACCTTCCTGAGCCAATTTAC
ATGTGAAGACGAGCGTCACGAGAGCGATCAGCGCATCATGCTGTCGCGCC
TGTGCGAACTGTTCCCGCAATTCAGCAGCGAGATGTACGCCGCCGTGGCC
GACCAGCGCGAGTGCGGCGCGCGCAACTGCGACCTGGGCGCGCGGCTGGC
GTCGCAGCCGTGGATGGCCACCGTGAAGCTGGCGCCGGACGCGCGCAAGC
TCAACCGCGACAGCTACCGCGCGCTGTGGCACGCGGTCGGCGGCAGCTTC
CTCAACTCGTTCAACGACGAGTACGCGCGTCTGAGCGCCGTGCAACAGCC
GTTGCGCACGCGCCACGGCGCCGGCTGCCACTGCCGTAGCACCGAGCTGC
GCGTGTGCGACCTGCACCGCTGGATGCACTGCTACGTCTCACACGCGTTG
CCGCTGCGCCCCACCAGCGTCACTGTCGCACACAGCGATCAATGA
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